Os07g0656100

From RiceWiki
Revision as of 20:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0656100

Description

Protein of unknown function DUF580 family protein

Version

NM_001067036.2 GI:297607736 GeneID:4344145

Length

3730 bp

Definition

Oryza sativa Japonica Group Os07g0656100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28250618..28254347

Sequence Coding Region

28251442..28252815,28253765..28254019,28254122..28254145

Expression

GEO Profiles:Os07g0656100

Genome Context

<gbrowseImage1> name=NC_008400:28250618..28254347 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28250618..28254347 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccgccgacaacgccgccgcgccgccgcggggagatgtgccggagaggggcagaggagggggggagccggaggcgaaggagagggaggtgaaggtggtcgtggtggacgagccgcctggggcgccggtggcgaggctgcaggcgcagcggccgctggcgccgctgcaggtgaccacgcaggcgccgccgccgcccatgtccgtggcctccggcggcgttgagccgccgccacaggtggcgactttccagcccgtcatgcagaccccaccacaggtggcgttcgcgtcgctcaattcgcgcgtgtacaccaatggcatcacgctgtgcgtgttcctggtccacctcgccgcggccacgttcgccgtcgggttcttcgtgttcagggccgtcaaggacatcgtgcagcacccgcgttcccggaacgcgcagcgcgagcgaagcctgctgcgggaatggctgcctccggtggagggcgcggtggcgctcagcatcgtgctggcgttcgcgtggcagaaggcggtgcgggcgtggccgcgcgccatggtgggcgtcatcctgtggtccagcttcggcatcacgctggcggtgggcgcgatgctgatgtgcttctccatgccggccaccgtagggctcggcgtcgccatggtgatgttctccatcgggacggggctgtacgcgtgctgggtgacgcgccgcgtcgggttcacggcgcgggtgttcgagcgcgccgtgcagccggtggacaagttccgggggctgaacgggccggcctacctgatggtggcggccgggttcgtgtggatctccgtgtggtgcgtcgcggtgatcggcgcggcgaactaccggttcccggggctgaccatcctcggcctggtgctcagcttgatgtggacggcggaggtgatgcggaacgtggcgaacctgacggcgagccgggtgatcgcgctctactacctccgcggcatgcagtccagcgtgcagttcagcttccagcgcgcgctctcctacaacctcggcagcgcctgcctcggctcgctgttcgtccccaccatcgaggcgctccgcatcgtcgcccgcggcctcaacctcctcgagggcgaggacgagttcatgttctcctgcgcgcactgctgcctccacgtcatgaacgccatcttcgagttcggcaacagctgggccttcgtccacgtgagcttcgacggacacacgttcttcgttcttgttgctccatggtttaagtttgtggtgacaatggcggatgggtggtggtgtttgcagatcgcggcgtacgggagggggtttgtgcaggcgtcgaggagcacgtgggagcagttcgagaggctacaggggatgccggcgctggtggactcggacatcacgagctcggtgtgcttcctcaccggggtcaccagcggcgcgctctgcgtcgcgctcgcggggtcgtggacgttcgccacgcacaagcactacaccgccaccgtctcgctgctcgccttcttcgtcggatacctcatggttcgcaccgcagcttcgcgccccacctctctagacacattttctttcggagatttgttccgagcgagtgaaaaagtatctcgagataccgttacctcacgataccaaatcgtttccgatcgttggatctag</cdnaseq>

Protein Sequence

<aaseq>MGAADNAAAPPRGDVPERGRGGGEPEAKEREVKVVVVDEPPGAP VARLQAQRPLAPLQVTTQAPPPPMSVASGGVEPPPQVATFQPVMQTPPQVAFASLNSR VYTNGITLCVFLVHLAAATFAVGFFVFRAVKDIVQHPRSRNAQRERSLLREWLPPVEG AVALSIVLAFAWQKAVRAWPRAMVGVILWSSFGITLAVGAMLMCFSMPATVGLGVAMV MFSIGTGLYACWVTRRVGFTARVFERAVQPVDKFRGLNGPAYLMVAAGFVWISVWCVA VIGAANYRFPGLTILGLVLSLMWTAEVMRNVANLTASRVIALYYLRGMQSSVQFSFQR ALSYNLGSACLGSLFVPTIEALRIVARGLNLLEGEDEFMFSCAHCCLHVMNAIFEFGN SWAFVHVSFDGHTFFVLVAPWFKFVVTMADGWWCLQIAAYGRGFVQASRSTWEQFERL QGMPALVDSDITSSVCFLTGVTSGALCVALAGSWTFATHKHYTATVSLLAFFVGYLMV RTAASRPTSLDTFSFGDLFRASEKVSRDTVTSRYQIVSDRWI</aaseq>

Gene Sequence

<dnaseqindica>1533..2906#329..583#203..226#accaacggtcacagattagcctccgcctcctccctctctcctcctctcgccaccaaatcctccatagtccacaccccaccaccactccaccaccatcccaaccaacaacacttcgccatcacgccgacgccaggaggagccacgccacgccgcgccgcgctcgcggtcgacctcctcctccccccggtgccctgacgacgacatgggcgccgccgacaacgccgccgtacgggccgttcttggctctttcctctctctctgagtagtgtctactgtctactgtgcttcttcttgctcatggggttgctccgttgttggattcgtgcaggcgccgccgcggggagatgtgccggagaggggcagaggagggggggagccggaggcgaaggagagggaggtgaaggtggtcgtggtggacgagccgcctggggcgccggtggcgaggctgcaggcgcagcggccgctggcgccgctgcaggtgaccacgcaggcgccgccgccgcccatgtccgtggcctccggcggcgttgagccgccgccacaggtggcgactttccagcccgtcatgcagaccccaccacaggtaactaaacaaatgcccaatttgctgatttctttttggctgaatttaaaattcggtggtctctgaatcttcttgatttaaatagtgagattggctgagtcttttctacgcatgtggggtgtgtgtgcgtgtgtgagtgagatcaactgtttgtagcacaaaactggttggtggacatgtcaataattttgtttggtataatcaagcaactcttttgtatagttcaatcccctccacttgacatttcggcataaaaatttctgcgatcatgtggcgactttggctgcaacgacaatggcagaattggttttttaactagttccaagaaacagtttttagaggatacagaaagttgagtttgatctcgttttatacaattctaaaccacttgtactactattttactttgaaaagatttgattgggttttggatatattttgtggtataactcgtatctgagtaaaaagaaagttgaagtattttgcaagttggaaatgctttcaatcaatcaagcagattagcaatgtttgcactcagcaacaaccgaataaatcagcaacgcgtgcagctatgtgcgagcccaaagttgctcagcctttcggtgacagaaaaagataagagaggtggtagtgtttgacacgatttcttaatcaatgtagcctaacgtatagccttcattcattagatgactcatgtgtaacttaagctctaatacctccctaatagaatacctctagaatagagtaatgcactaatgcttggaatcgaatctccagttcaccgtacaagttgattttcatagcaattattccataggtaccaaaacctattgcccgttagattaagtagtagattaagcttcaggttgcagaacatgtgctaggtaatgtcctatgctaatccaatttggttgtaattgagtaaattaattaactttgagtgtggcaggtggcgttcgcgtcgctcaattcgcgcgtgtacaccaatggcatcacgctgtgcgtgttcctggtccacctcgccgcggccacgttcgccgtcgggttcttcgtgttcagggccgtcaaggacatcgtgcagcacccgcgttcccggaacgcgcagcgcgagcgaagcctgctgcgggaatggctgcctccggtggagggcgcggtggcgctcagcatcgtgctggcgttcgcgtggcagaaggcggtgcgggcgtggccgcgcgccatggtgggcgtcatcctgtggtccagcttcggcatcacgctggcggtgggcgcgatgctgatgtgcttctccatgccggccaccgtagggctcggcgtcgccatggtgatgttctccatcgggacggggctgtacgcgtgctgggtgacgcgccgcgtcgggttcacggcgcgggtgttcgagcgcgccgtgcagccggtggacaagttccgggggctgaacgggccggcctacctgatggtggcggccgggttcgtgtggatctccgtgtggtgcgtcgcggtgatcggcgcggcgaactaccggttcccggggctgaccatcctcggcctggtgctcagcttgatgtggacggcggaggtgatgcggaacgtggcgaacctgacggcgagccgggtgatcgcgctctactacctccgcggcatgcagtccagcgtgcagttcagcttccagcgcgcgctctcctacaacctcggcagcgcctgcctcggctcgctgttcgtccccaccatcgaggcgctccgcatcgtcgcccgcggcctcaacctcctcgagggcgaggacgagttcatgttctcctgcgcgcactgctgcctccacgtcatgaacgccatcttcgagttcggcaacagctgggccttcgtccacgtgagcttcgacggacacacgttcttcgttcttgttgctccatggtttaagtttgtggtgacaatggcggatgggtggtggtgtttgcagatcgcggcgtacgggagggggtttgtgcaggcgtcgaggagcacgtgggagcagttcgagaggctacaggggatgccggcgctggtggactcggacatcacgagctcggtgtgcttcctcaccggggtcaccagcggcgcgctctgcgtcgcgctcgcggggtcgtggacgttcgccacgcacaagcactacaccgccaccgtctcgctgctcgccttcttcgtcggatacctcatggttcgcaccgcagcttcgcgccccacctctctagacacattttctttcggagatttgttccgagcgagtgaaaaagtatctcgagataccgttacctcacgataccaaatcgtttccgatcgttggatctagctggacaagatggacattgttagatccaacaatcggaaatgatttgttaccggtatctctaggtattttttgttagaccgaagcaaattttttcttttgttgtgctcacgagaatttttgttgtgcagacacggattgggatggcgctgccacaggcgtgcgtgggatgctactacgtgtgcttcgcggagaacccgacgtcgcggctgttcgatcccacgataccggagcggctgcacaagatgcaggaaggcgccgacccgctcgtgccgacgccgcgcttcccgcaacaacaccccggcgccgcctgatcgcgacacaaaaaagctcacccgatcaacgagtcccaaaccctttggagattcttgcagaaacacatgagaacgaggtgatctcatcctgtcgcctgtgcagcctgagctgacccggtaggcgagactcctctcgtcgttgcgtgaatgggaggcaactcgagatggaatcatgaatcctttggaccatgctgcaagtgtaggcgagcagaatagtagtagcagagaatttggacccaacccctattgctagactttcccccttttcgtttctgtaaatttcccccatttttttgacaccaccgattttttgttagtgaaattagatgacaagcctgaacatttcatatttcaggtgtgtaaagaggtttcattacatctataggaaattcttgtgaatattatccaactttttttttatccttttaaggtcatactcctatttgtttccaagatgaccatgatgaagtcatgaactggaccttataattgaagggcacagagtatcagagc</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0656100, RefSeq:Os07g0656100