Os05g0418000

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0418000| Description = GDP dissociation inhibitor protein OsGDI1| Version = NM_001062101.1 GI:115463932 GeneID:4338812| Length = 6224 bp| ...")
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Gene Name

Os05g0418000

Description

GDP dissociation inhibitor protein OsGDI1

Version

NM_001062101.1 GI:115463932 GeneID:4338812

Length

6224 bp

Definition

Oryza sativa Japonica Group Os05g0418000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20484186..20490409

Sequence Coding Region

20484299..20484385,20486104..20486166,20486332..20486415,20486776..20486883,20487025..20487197
,20488191..20488302,20488524..20488604,20488691..20488753,20488835..20488936
,20489126..20489250,20489373..20489583,20489681..20489755,20490046..20490099

Expression

GEO Profiles:Os05g0418000

Genome Context

<gbrowseImage1> name=NC_008398:20484186..20490409 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20484186..20490409 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgaggagtacgacgtgatcgtgctcgggacgggcctcaaggagtgcatcctcagcggcctcctctccgtcgacggcctcaaggtgttgcacatggatagaaatgactactatggaggggattccacctcgctcaaccttaaccagctgtggaagaggtttagaggggaagacaaacccccagctcatctgggtgcaagcagagattacaatgtagatatggtcccaaagtttatgatggcaaatggcacattggtaaggaccctgattcacactgatgtgacaaagtatttgtcattcaaagctgttgatgggagctacgtcttcagcaaagggaagattcacaaggtacctgctaccgatatggaggctctgaagtcccctttgatgggcctttttgagaaacgcagagcaagaaacttcttcatttacgtccaagattatgatgaagctgatccaaaaacacatcaagggttggatcttactacaatgacaactagagaactgatagcaaaatatggtttaagtgacgatactgtggatttcatcggccatgcacttgctcttcatagagatgatcgttacctaaatgaaccagcaattgatactgtaaaaaggatgaaattatatgcagagtcccttgcacgctttcaaggaggttcaccttatatttatccactgtacggtctgggtgagctgccacagggttttgctcgcctaagtgctgtttatggtggcacttatatgttaaataagccagactgcaaggttgaatttgatatggaagggaaagtctgcggcgttacatcagaaggagaaactgcaaaatgcaagaaagttgtttgtgacccttcctacttacccaacaaggttaggaagataggaaaagttgcacgcgctattgctattatgagccacccgattgcaaacacaaatgactcgcactcagtccagattattttgccacagaaacaacttggacgcaagtcagacatgtatgtcttcggttgctcatacacacacaatgttgctccaaaagggaagttcattgcatttgtgtctacagaagcagagactgaccatccagagtctgagctaaagcctgggattgatctacttggtcaagtagatgagctattctttgatatctatgatagatatgaacccgtgaatgagccatctcttgataactgttttgtctcaactagctatgatgccaccacacattttgagacaacggtgacagacgttcttaatatgtatacactgatcactggaaagactgttgatctcagtgtcgatttgagtgctgccagtgctgctgaagaatattag</cdnaseq>

Protein Sequence

<aaseq>MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST SLNLNQLWKRFRGEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFK AVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGL DLTTMTTRELIAKYGLSDDTVDFIGHALALHRDDRYLNEPAIDTVKRMKLYAESLARF QGGSPYIYPLYGLGELPQGFARLSAVYGGTYMLNKPDCKVEFDMEGKVCGVTSEGETA KCKKVVCDPSYLPNKVRKIGKVARAIAIMSHPIANTNDSHSVQIILPQKQLGRKSDMY VFGCSYTHNVAPKGKFIAFVSTEAETDHPESELKPGIDLLGQVDELFFDIYDRYEPVN EPSLDNCFVSTSYDATTHFETTVTDVLNMYTLITGKTVDLSVDLSAASAAEEY</aaseq>

Gene Sequence

<dnaseqindica>114..200#1919..1981#2147..2230#2591..2698#2840..3012#4006..4117#4339..4419#4506..4568#4650..4751#4941..5065#5188..5398#5496..5570#5861..5914#ctcgcccgcgtcaactccatttcctcctccgccgccgcctcctcctccctgcttgtcctcgccttgctgccgccccccgccgcggcgaccgagcacgcgcacgagcaggagccatggatgaggagtacgacgtgatcgtgctcgggacgggcctcaaggagtgcatcctcagcggcctcctctccgtcgacggcctcaaggtacgtggctagggctctcgtctctctctctctctctctctctctctctctcacccgctcgccgccggctactagcttccgcagatgctcgccgtcgccgcccccccgccgatccgcccgctcccgtgctcggattccgcgtcgctcgacacgggatcgggtgtctctaggtgtatctcccgtcgatcggcgtgggctgggatcgcgtagatcggggctccgccgccctcgttttggtcttggactcgcagcgccgcgctttagatggggttgtagctcgcccatttggtcgctcgtttagtgagctctgtaagcgtagcgagatggtaattcgtgtagagatcgtggctggggtaccccgcttggatgggtataggttgcgcgcgatggttgtggtggttgcttgcgttaggggaggaatcgtgagttttttttggggggcctcggctagtgatatctagtttgctttgcgtgcttgagtagcctggttctctatgctggcttcagcaaatgattttcaatgacatagcgggacagtgatatcgggaaattcacaacaagatctaagggcatgtacaacccgtctcctcgccccgtctgtgtgttgatgattttgcaaaaaaaacccgtgcacgcgcagagacgggcagcccggcgcctcccgacgcgacgagttcatcccgttctcccaggtggagtcgacgcgagcccacgcgctgtagagcgccgtcgtccccaggcgacgggcgaacggatcccgcgtgcggccgcgctcgcccacaaatttcccaggcaaccacgtgcgctgttctcccgcgctctgctcgcgacttgccccaaatttcttcgcccgcccatctgcgcggccgccatctgctcgccccccatctggtattctcgccggagttggtgcggcgggatgtccacgcccggcgcagcttggagtaggaatggatcgaggacattggatgcggcggcgacggccccaggccgaaccctaggtgtcggggcggcggcggctccctcattcgttgaggcaagaaggggtgaggaaagatgtcgagtgtgcatttggtgttctgcaatcacgctttgatattgttcgtcgaccagcacggttatggaagcaaggagacgttatcaacattatgcaagcttgtgttatccttcacaatatgatagttgaagatgagaaggactcaattagggatgtcttggatttgaatgaaaatccaagtgcgacgatagtgatcccaccagaagtgtgtacaaatgatgaccctaatccaagctttgcagaggcacttcgtagaaattcggctatcaaagctcgaccaacacataggcaacttaagaaggatctaatcgagcacatatggcaacgctacggaaacaaagaaaattagacaaaaagcgttgtaactatatataatataattattatatatatggtttctaaaaattattgtaatcgcgtttctattatttaatcttcatatttattctatcaattagccacacaatggtacatacaaatacatttatagttgatctaagctacatgcaaagcattaaacagcttacagatggcccctctgtttgtgggttgtatgagctgtctttatatctatctgtatgagaattttaaggttctgcagacgacccaccgtctgtgggttgtacatgccctaacagacgtgcttgtgatggtttttcaggtgttgcacatggatagaaatgactactatggaggggattccacctcgctcaaccttaaccaggtaagcaactccaatgaactaaatttgaatagtagaggtttcatattcgcgtgcttatttcttgcgaagggatgcttatgttattacggagtacattatatcctttgattaattctatctttgtttgtttactgacattggttttgaattcgcttttggattaagctgtggaagaggtttagaggggaagacaaacccccagctcatctgggtgcaagcagagattacaatgtagatatggtcccaaaggtgcgatagtaacttcccgcctaaaattatctttgttctacttttagtagcagataacgtatgtggcaatgaggtatcgtattgtggtggtgtcatgacatcataaacagaaccctattatggcgcataggtttatcttgaaacctttagatctttttgtattatatagatgtattggttcgctgatttggaaactatgtaaatctcatttatagatactcagatggaaaatatcgtctatgacttttgttgattgtcatgggtggatggtttattacaagtggatactactatgactccatgaataacatactgatgttgcttgttgcttgattatctaaagttcttttgtttgggcagtttatgatggcaaatggcacattggtaaggaccctgattcacactgatgtgacaaagtatttgtcattcaaagctgttgatgggagctacgtcttcagcaaagggaaggtaacatcttcagcttatgttagtcttttaatagcatcatatttccgatagtgttttctctaagtggttgttagatctatattctggtgatctgttcttattcctattaacatacccttttctattttcattgtcaatcagattcacaaggtacctgctaccgatatggaggctctgaagtcccctttgatgggcctttttgagaaacgcagagcaagaaacttcttcatttacgtccaagattatgatgaagctgatccaaaaacacatcaagggttggatcttactacaatgacaactagagaactgatagcgtgagtacatcagtgcttgcttctcattagtgcacaccttctgtttctaaaggaaacaacaaatttggaacatgcccattatctttatatgggaggtattgttgtaatattgtagacttatacatgaactaacgcgtacatgaaatgtcaaacatcatgtgggcatcaatccatacgtgaaaccaagttcatttgaaggaaaaaaaatgcactcttgaatatatcagatgtctggctaatagtcaatagcaaagagaacatccatagctccatctgtccattgagtagaactgtagaagggtctgatagatggaattttgcatggaatacaaacgtggcatgtggcagtcttcatgtacaaagcaagagcccaaaacttagttgccactaatgtattgctaaatttaaaataactgttgatacggctgaaagatttctttggatgaaactaccttggtaataaaaaccaaagtagttacattgttgaaccatgcaacagatttgtgtttatctgctgtgtgctgtggtactgcattacaagcctccttggtgctgcttatgcaatgtagaaacctgaatatctctttcagggaaagtgaaaaatgaaagcataggtgttggggtgggttggaggtatctaggttatggcaccaatatagttattactggaaaacttcaatttgccgtatttttagtttgttccatatttgcgtcttgcctaatgcaggcccacctaaatatagattaccttcttttgtatcttttgtaacttataagaagattacttcctgatggatattcttgttgtcttctagtgattgtgttccaataaaaaggcattattttatgaaaatagcagataaattttcttcctcacaatatataattgatttgccttcaaccttagacatgttgcaaaaggttatacctgtgcttattgttacattttatttgaacataagtgactctgtttccatgtgtcttcttttccagaaaatatggtttaagtgacgatactgtggatttcatcggccatgcacttgctcttcatagagatgatcgttacctaaatgaaccagcaattgatactgtaaaaaggatgaaagtaagtcttgtttgtagtttgctgttatcagtatcctctgctcatatcctaccattccattttcatctcttaaacaccttcaggctgcattagttagccataattcatttcccggttactacttactagtgttcctcttttagctgtgtcactgctgttttgtgaatattctttctttatggagttcagttacatttattggttatcttctgttcttgtagttatatgcagagtcccttgcacgctttcaaggaggttcaccttatatttatccactgtacggtctgggtgagctgccacaggttagtcaatttgtgttaatttaaatacatgtcatgttgcatgcgcatgtgttttaagatggtcatctgtaatgcttattccacagggttttgctcgcctaagtgctgtttatggtggcacttatatgttaaataagccagactgcaaggtgcgattatcatcaacccaatcatgacttgcatcatctgggtgacaaccaaataaaatttcttttggcatgtctttttaggttgaatttgatatggaagggaaagtctgcggcgttacatcagaaggagaaactgcaaaatgcaagaaagttgtttgtgacccttcctacttacccaacaaggttaattttctttcctgtattcagcacaggattgttcttttaatatgttcttctgggatatttaaatgtcatattccatctcaagatattcacaattgaacttactgtgtttttcttctgcccttccatttgttgataagttttattaactgcaacctcatttgatgttctgcttacgtttattaacaggttaggaagataggaaaagttgcacgcgctattgctattatgagccacccgattgcaaacacaaatgactcgcactcagtccagattattttgccacagaaacaacttggacgcaagtcagacatgtgaggcctttcgcaatctcaatcacttctcatcagatgaattactagatttgcttgcccattgcttttaataagttattctatccccatttacggaatttctattggtattctcctgttaggtatgtcttcggttgctcatacacacacaatgttgctccaaaagggaagttcattgcatttgtgtctacagaagcagagactgaccatccagagtctgagctaaagcctgggattgatctacttggtcaagtagatgagctattctttgatatctatgatagatatgaacccgtgaatgagccatctcttgataactgttttgtctcaactgtaagttctacggtgtatgattttgcacttgaacattaagtttggttgtgttggagtataatagtataaacatctctggttgttattctctctgcagagctatgatgccaccacacattttgagacaacggtgacagacgttcttaatatgtatacactgatcactggaaaggtaagacacgcttcttttctccatttactttaataaatgtaatgcttctgtctagcagttcaagctaataaccactgataatactttatatattttgttataaacaccttttctggagagtatggaaaactaatatctgtaggctatagagattagattaccacattttctaaaatagatcgacctttatgttatcttcttaattactaaatacatatccattcgattggctattctgttgcacaattatgtattttgtcctttctttcctaattcttctctgcttgcagactgttgatctcagtgtcgatttgagtgctgccagtgctgctgaagaatattagagttcacaatcaaaatccaatcattcacaaagatataatgctattccttggcgaacaccacaggtcagaccataatgaatgactgggatggttattcgagctccagattgtgtattcagtgttctggccaatggtctgtagcatgcttgttgttatcagtaatatgctgaactgttgcttcagatgactgaatgatggtggtttttatttgctactttcagtaatggttgaatgatgtaaacagtgtacacagtggagcgctttgcgactgatgtatcatatactgctcggtaattttacatgtctgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0418000, RefSeq:Os05g0418000