Os05g0418100

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0418100| Description = Similar to Seven transmembrane protein Mlo8| Version = NM_001187496.1 GI:297724122 GeneID:9268698| Length = 5156 bp|...")
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Gene Name

Os05g0418100

Description

Similar to Seven transmembrane protein Mlo8

Version

NM_001187496.1 GI:297724122 GeneID:9268698

Length

5156 bp

Definition

Oryza sativa Japonica Group Os05g0418100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20491774..20496929

Sequence Coding Region

20492242..20492478,20492565..20492625,20492708..20492775,20492856..20493065,20493770..20493810
,20493965..20494014,20494125..20494213,20494289..20494363,20494554..20494700

Expression

GEO Profiles:Os05g0418100

Genome Context

<gbrowseImage1> name=NC_008398:20491774..20496929 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20491774..20496929 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agtctgtttatttgttccaggctgataaaatcatttgaaattgcaggtcaaccagggcctgccaaggtgacccacgtgcatcaatttgaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctgcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcgtcttggctttatcatgactcattgtcgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgactttaagaaagtggttggcataagctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgtcaacggttggcacacgtacttttggattgcttttcttcccctaattcttctactagctgttggcactaagctggagcacgtcatagctcagttagcccatgatgtggctgagaagaactctgcaattgagggtgatttggtcgtaaaaccatcagatgaccacttctggcttgggcggccaaggattatcctctacctgatccacttcattctcttccagaacgcgtttgagatcgcgttcttcttctggatactcaccacatacgggttcagttcctgcataatggggcaagttagtttcatcgtgccgaggcttgttatcggggtcaccatccagcttctctgcagctacagcaccatgcctctgtatgcagttgtcactcagatggggagcttctacaagaaggagatcttcaacgatcacgtgcagcagggcgtgctgggctgggcacagaaggtcaagatgaggaaaggactcaaggagggaagcgctggcgccggcgtcgccgccgagccgtcgaacggcggcggcggcgacacggcggggccttctgtcaagatcgaaatgatgagaagggcagcgcgggaaggcaatgatgaagctggtgtaagcatagagtga</cdnaseq>

Protein Sequence

<aaseq>SLFICSRLIKSFEIAGQPGPAKVTHVHQFEFINDHFKGMGKDSK ILSWLHSFVKQFYGSVSKSDYTTMRLGFIMTHCRGNPKFDFHKYMMRVLESDFKKVVG ISWYLWVFVVIFLLLNVNGWHTYFWIAFLPLILLLAVGTKLEHVIAQLAHDVAEKNSA IEGDLVVKPSDDHFWLGRPRIILYLIHFILFQNAFEIAFFFWILTTYGFSSCIMGQVS FIVPRLVIGVTIQLLCSYSTMPLYAVVTQMGSFYKKEIFNDHVQQGVLGWAQKVKMRK GLKEGSAGAGVAAEPSNGGGGDTAGPSVKIEMMRRAAREGNDEAGVSIE</aaseq>

Gene Sequence

<dnaseqindica>4452..4688#4305..4365#4155..4222#3865..4074#3120..3160#2916..2965#2717..2805#2567..2641#2230..2376#agctgtttccttccgctcctccaccgccgccggcccgggaagggagggaagatggcggcggaggcggcgacgctggagttcacgccgacgtggatcgtggcggcggtgtgctcgctcatggtgctcatctccctcgtcgccgagcgctgcctccattacctcggcaaggtgcgtatgtatgtctctgccttgctttcttgatttcttcggctccaattcctgtactcgccgtgggatctgcggctaacccgccgtatacgtcttttgtttggttggggaatgggagcgcagatgctcaagaggaagaatcagaagccgctctacgaggcgctcctcaaggtcaaggaaggtgaacccaaaatactcccgtttcttgtatctctctgaactctctctctctctctctctctctctctgtgaaatgaaatgggaatggatagagtaaaatttgtgtattttattgggtgatctatgcagagaaggcgcatctttttatatcccaatttttttttgcttatgctggggtgaaatgggggatgcttgtcagattttttatcatcgaaacggggaaatgggttcttttggtacaagctactgattccttgttttgagtccatcactattcggtgggggtttagcggtgtattcctcgtactgttcttgcttttaggatttcaggagagtttggttccaaaaaggatttcagtaggggggttcaagatgcttactacaaaggtctaaagttagtttctttgtcctttcaaagaaaagctagtgtctttgtttttctcctttcgtccatgtagtaaaatcttctctgcagaattgcatgaacaccaatggcatatatatataagatgcaaaaacgaaatctgtttctgagtttttgatacagagtgtatgaaagctattgatactgtacatacagtggaagtaactaactacatatctgaacatttttctttttgtggtgtgttgcagagttgatgcttcttgggttcatctcgctgctgctgacggtgttccagggcctgatccagaggacctgcattcctcctcgctggacagtccacatgctgccatgccagagggaagcggtgggccccgcaaaggagcacgttgctgctgctcagatcgttggcagaattgggaggcgattgctcagtgaaggtggggcgggggcagagctttgccagaagaaggtgataattacattggaccatgaaaatggaacagtgtttattaacctcgtttcgtttttgcctaagctgtggtgactgataccctgtcctataggaaagctggttaggcaccaaattcatgacgatttgttaacaactgaacatgcaagtagttaatgttttagttggacttggtagctaattttgcccccaagttggttagactgaatgaacctgggtggttttatttaatgttttagtggtctttttcaatcataaaaacttgatgccacaatgcatgctgggtctatctgtctttctcaaatggaaacatcataatgcatttcatttgacagctaggtagccgcattgacaagcaaggatgataaatttactttgttgaaatttatttcagctaacctgttaggcaggtaataatcttagttaaaccagattgctgatcaaatattgtccttaagaaaactacatgggtatatactttcaactgattaaaattttcaactgggttttgtcgcttcttacttcttagcatattttaggcagaaaaaacttcctatcactaagatgttctgctcatgtgtgataaaagcaattcgaatttgcttgatcaaatgttatatatgaattctaatgtttattttaacaggggaaagttccattgctgtcccttgaagccatacatcaattgcatattttcatatttgttctggctatcacacatgttattttcagtgtttcaactatgcttctagggggtgctaaggtaagccacttgtaagttgcaacatttcttgcagctaagctgccaaaccctttttgctattgttagctgatttttctgctgtaatctattatttagatacaccaatggaaacaatgggaggttgaaattcagaaagatgctgtgggaagtggtattgcactatatttttcatgtttgagtgcaatgacacacctgagggttgcataacttttttttcttttgtaaaatttgataaatttatatgaaaattttatctgcttttgaagtctgtttatttgttccaggctgataaaatcatttgaaattgcaggtcaaccagggcctgccaaggtgacccacgtgcatcaatttgaatttatcaatgatcattttaagggcatgggcaaagactctaaaatattgagttggctggtaagaaatgcatgtcttgtgctttctctataacttatgccttgctatatggtgtttgcatgtattagtcaagttgggttacatatcgctttttatgcatgtataacaatttaacaaataatttattttggtctaattttaagtgactacaaaatgttagggaacttattatccttttattctacttcagcattcttttgttaagcagttttatggatcagtttctaaatcggattatacaacaatgcgtcttggctttatcatggtaagcatttattcatataattcactcatgcgaaattttcttgtttgtaaaaatgagatcctttttggattgcagactcattgtcgtggaaacccaaaatttgatttccataaatacatgatgagggtcttagagtctgactttaagaaagtggttggcataaggtaaagctaagacgcctgagagtggtccagatgtttgtattttccttttaaattcaaaacgaacttgtaatgcacttaaacttagccgtgatgtgtctatttcctttcagctggtacttgtgggtttttgttgtgatcttcctcttgctgaatgtcaacggtatcctctcttgaaagcactaatgttattttcatgtagactactcttgccaaattagtatccatctctttttcagtacgcacctttgccatagtatattccaggatttagcttcccaaaacttatcttattccttgtttttgtcaaactgcaggttggcacacgtacttttggattgcttttcttcccctaattgtaagtgcgttaaatctggttttctataaatttaaagaccagtcaagagggatcaacaaatacttcttttaagatgttgccaatcacattctaacatttggtttatgtgagccctttgagctttgattttaccatggaaactaaaacttgaaacccctcagttcatggatactcttgtcactgcctcattctctatgacgtatctaggatttttatacgggtggtccaacttatataattcttttaaataacctaaatataacaaagttagaagtataaattgataaaatgcgcattataatatattaataaaggagctttttttaaaaaagtttcttttcacatatgtatatatatgcattgggctaggattttttgggtggtcccagaccaccgggatcaccccctggatctgcctacgctcattctcccctatacaagggacatgttggataaatatcattttttacctagtcaacagtgccttgatcgagatacaattactcaccgttgttttctccaaactactatgaaacatctagtagaaatatacaattgtacttgacatggcctgaaacaacaaatcatgctgcaagtaaatctttaatcatctctaaggatgaaatacaattgtcctacttgccagaaaataaaaactactgtttgtcttgtggtaacttctgtatttttgatactccttgcagcttctactagctgttggcactaagctggagcacgtcatagctcagttagcccatgatgtggctgagaagaactctgcaattgagggtgatttggtcgtaaaaccatcagatgaccacttctggcttgggcggccaaggattatcctctacctgatccacttcattctcttccagaacgcgtttgagatcgcgttcttcttctggatactcgtaagcatcatttctgaagcacatctcggttagatacaatggttgatctttatatttgttttccctgcttcctttcctagaccacatacgggttcagttcctgcataatggggcaagttagtttcatcgtgccgaggcttgttatcgggtaatctatacatttcattataatttctcgccggtagtaaaaaatgtgttatataactcctgcatccatccttcaattttagggtcaccatccagcttctctgcagctacagcaccatgcctctgtatgcagttgtcactcaggtacattccacataaaaaaggaattcagtgccctaaaatgttcatagcaatcacaagattgatgaaccttttttttgtctccaaagatggggagcttctacaagaaggagatcttcaacgatcacgtgcagcagggcgtgctgggctgggcacagaaggtcaagatgaggaaaggactcaaggagggaagcgctggcgccggcgtcgccgccgagccgtcgaacggcggcggcggcgacacggcggggccttctgtcaagatcgaaatgatgagaagggcagcgcgggaaggcaatgatgaagctggtgtaagcatagagtgatgggggcatgcagcgttggttaaggtatataggtagtggaattgctgtgttgtggagcgttttgcacaagatgttgtacttcctccctcttaaaaagaatcaacctaggatagaacgtgacttattcctaagacaacgaatctggacaatgtgacccatccagattcgtcatttcaggataggtcacattctatccaagattaattctttcttggacggagagagtatgctgttttgattttgtgaacctggaaggctggaatgttgctgcgtgtgttcatgtgctatcgtttttataggtagcctttacagcgtggtgtttcatatggtagccttgtgtttcttttctttcttttcttttttttggaaaaaggccttatgtttcatatggtactaaggtgataatgtggtggttgtgcccaaaagcacaagtaacctgaatactcaaggtaagactcacttattagg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0418100, RefSeq:Os05g0418100