Os05g0418800

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0418800| Description = Similar to CUC2| Version = NM_001062103.1 GI:115463936 GeneID:4338814| Length = 2242 bp| Definition = Oryza sativa ...")
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Gene Name

Os05g0418800

Description

Similar to CUC2

Version

NM_001062103.1 GI:115463936 GeneID:4338814

Length

2242 bp

Definition

Oryza sativa Japonica Group Os05g0418800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20523434..20525675

Sequence Coding Region

20523434..20524150,20525048..20525322,20525414..20525675

Expression

GEO Profiles:Os05g0418800

Genome Context

<gbrowseImage1> name=NC_008398:20523434..20525675 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20523434..20525675 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcagggacgacgtcgacgacgtcacggcgggcgccgccgggtcaggggaggaagcggcggccgatcaggaggaggcggccgccgctgtcgccggcgactcgcacgagaacgacctggtgatgccggggttccggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggccggcggttcaacgtcgagctcatcaccttcctcgacctctaccgcttcgacccatgggagctccccgcaatggcggtgataggggagaaggagtggttcttctacgtgccgcgggaccgcaagtaccggaacggcgaccggccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgcggcgagaacagccgccccatcggcctcaagaagacgctcgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacgagtaccgcctccccccgcccgccgcagacgccgatctcttctacaagtctgagatctcgctctgccgcgtctacaagcgctccggcatcgacgacggccacggccaccaccagcgccccgccggcaacgtgcaagcgtcgtcgtcgtcggcggcggcgaggccgccggagcagcactccggcaacaacactgctgccggcttaccggcttgccggcataggccgtcaccgtcgtcgtcgtcgacgacgacggcgcagcagcacaccagtttccaccagctgctccaaggcgagtgctcggcggcggcggcggcgccgccgccgccgccgtcgctgccagcatcggccacgacgcgcaacagtaatgcgtcacagctgctgatgccgccgcctcccccaaggccgccgtgcgccgccgcctacacgtcggcggcggcggcgccgaccgagagcgccgccgtcctcgccgccgcctccacgtactcgctgcttgccgccgccggcagtagctccacgcacatcgacgagctcagcacgctgctcgcgggccacagccatggcggcgcctacggtaataaccacattgtcgccggaagccatcatcacttccccttgccgccgtcgcagctgatgccacagctcggcacgctgccgatctcgccgccgctggccgccgtctccgacaagctctgggattggagctcggtccctgacacgtcgacggccagggattacgattcttctggttttagtgatcccaagtaa</cdnaseq>

Protein Sequence

<aaseq>MSRDDVDDVTAGAAGSGEEAAADQEEAAAAVAGDSHENDLVMPG FRFHPTEEELIEFYLRRKVEGRRFNVELITFLDLYRFDPWELPAMAVIGEKEWFFYVP RDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSGKAPKGVRSSW IMNEYRLPPPAADADLFYKSEISLCRVYKRSGIDDGHGHHQRPAGNVQASSSSAAARP PEQHSGNNTAAGLPACRHRPSPSSSSTTTAQQHTSFHQLLQGECSAAAAAPPPPPSLP ASATTRNSNASQLLMPPPPPRPPCAAAYTSAAAAPTESAAVLAAASTYSLLAAAGSSS THIDELSTLLAGHSHGGAYGNNHIVAGSHHHFPLPPSQLMPQLGTLPISPPLAAVSDK LWDWSSVPDTSTARDYDSSGFSDPK</aaseq>

Gene Sequence

<dnaseqindica>1526..2242#354..628#1..262#atgagcagggacgacgtcgacgacgtcacggcgggcgccgccgggtcaggggaggaagcggcggccgatcaggaggaggcggccgccgctgtcgccggcgactcgcacgagaacgacctggtgatgccggggttccggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggccggcggttcaacgtcgagctcatcaccttcctcgacctctaccgcttcgacccatgggagctccccggtacacacatcacacataattaagctaattaaattaagctgataattagttaatttggtgatcgatcgatctgtggttgtgcgtgcgtcagcaatggcggtgataggggagaaggagtggttcttctacgtgccgcgggaccgcaagtaccggaacggcgaccggccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgcggcgagaacagccgccccatcggcctcaagaagacgctcgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacgagtaccgcctccccccgcccgccgcagacgccgatctcttctacaaggtaataattattattggaaccgagaccattgtggaatttggtttcagaagaattaatcatgtgtagctagggtttgggatcgagctcaattttgcagagagctagctagctcttgtgattggattcattattccagctttgatctctttttttttcttttcagtttgcaaattgaggtgtgtccagctgcttgctgagtgtgtgtgtgtgccgtaaatttagtatttggtgtgttaatcatttgtttatctgcaatatctttcgatctgtgcggtgcttttactatggtcgcatgatttgtgtgagttccttttttcttatcagatctatgaactagggtttgctttttgtccccctttggttctttttgggcatatgtatggacatgagcaaaaggcaagagctatgctattgaaattctcctagctagataccacttacatatgcatgattccgtcttgttctgcaaagtatattgttgttctgcatgtgcaagctgaaaattttggcttccccaattgctaaattattcagatctgaacttagtttgaagcattagattttatagcccctcttcacttcatttctgcttcttaattacaatcctactaggctatagttactacactacaattatccgtgactgcatctttctctttcgatctgatgctggtaatttcttaagtttttctttggctttgaaatgtccagtgagaaagcttctgctgacaaattttgtagacattgcttaaattactttggattaggggatatttcaatatttcattaacttaatttcttcctcttaatttgcaagaaattaaagcaggccaatgcatgaatctccattattaattctcatcacattgtctctactctctactgatgatcatgcagtctgagatctcgctctgccgcgtctacaagcgctccggcatcgacgacggccacggccaccaccagcgccccgccggcaacgtgcaagcgtcgtcgtcgtcggcggcggcgaggccgccggagcagcactccggcaacaacactgctgccggcttaccggcttgccggcataggccgtcaccgtcgtcgtcgtcgacgacgacggcgcagcagcacaccagtttccaccagctgctccaaggcgagtgctcggcggcggcggcggcgccgccgccgccgccgtcgctgccagcatcggccacgacgcgcaacagtaatgcgtcacagctgctgatgccgccgcctcccccaaggccgccgtgcgccgccgcctacacgtcggcggcggcggcgccgaccgagagcgccgccgtcctcgccgccgcctccacgtactcgctgcttgccgccgccggcagtagctccacgcacatcgacgagctcagcacgctgctcgcgggccacagccatggcggcgcctacggtaataaccacattgtcgccggaagccatcatcacttccccttgccgccgtcgcagctgatgccacagctcggcacgctgccgatctcgccgccgctggccgccgtctccgacaagctctgggattggagctcggtccctgacacgtcgacggccagggattacgattcttctggttttagtgatcccaagtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0418800, RefSeq:Os05g0418800