Os05g0419100

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Revision as of 10:21, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0419100| Description = Similar to Nucleic acid binding protein-like| Version = NM_001062105.1 GI:115463940 GeneID:4338816| Length = 4621 bp...")
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Gene Name

Os05g0419100

Description

Similar to Nucleic acid binding protein-like

Version

NM_001062105.1 GI:115463940 GeneID:4338816

Length

4621 bp

Definition

Oryza sativa Japonica Group Os05g0419100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20549181..20553801

Sequence Coding Region

20549303..20549405,20549550..20549582,20550266..20550494,20553111..20553240,20553307..20553588

Expression

GEO Profiles:Os05g0419100

Genome Context

<gbrowseImage1> name=NC_008398:20549181..20553801 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20549181..20553801 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacggaggctccggggggccgtacacctcccgcacggccgaggaggtcttccgcgacttccgcggccgccgcgccggcatgatcaaggccctcaccaccgatgtggagaagttctaccagctctgcgacccagaaaaggagaacttgtgcctttatgggtaccctaatgaaacatgggaagttaccttgcctgctgaggaagttcctccggagatccctgaaccagctttaggaatcaattttgctagggacggcatgaatgagaaagactggttggcactagttgctgtccacagtgattcatggctactggctgttgcgttttatttcgcagcacgatttgggttcgacaaagaggccaggaggcggctcttcaacatgataaataacttacctacaatatttgaagttgtgactggcgctgccaagaaacagaccaaggagaaggcgcccaacagtaccaacaagcccaacaagcccagctcaaaaatgcaaccaagaccagagtctcattcaaaggctccaaaaccacctgcaccccccaaggatgatgatgagagcggcgatgagtatgcagacgaggaggaggaggagcgcgacaacaccctgtgcggatcttgtggaacaaatgatggcaaagatgagttttggatctgttgtgatagttgcgagcggtggtaccatggaaagtgcgtgaagatcacacctgctcgagccgagcatatcaaacactacaagtgcccagattgcggcaacaagagggcaagggcatag</cdnaseq>

Protein Sequence

<aaseq>MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCD PEKENLCLYGYPNETWEVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDS WLLAVAFYFAARFGFDKEARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNK PSSKMQPRPESHSKAPKPPAPPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFW ICCDSCERWYHGKCVKITPARAEHIKHYKCPDCGNKRARA</aaseq>

Gene Sequence

<dnaseqindica>123..225#370..402#1086..1314#3931..4060#4127..4408#cgaccctgtctcctctctctccgcctccaacccccacctcctcctcttctctcgtcttcgccgccgccaccgccgccgctgctatccgcaacagccgcgccgccgccgaagacgaccccagaatggacggaggctccggggggccgtacacctcccgcacggccgaggaggtcttccgcgacttccgcggccgccgcgccggcatgatcaaggccctcaccaccggtaatctctccccccgcccctctccctcccgcttccttactgttagcttccggatttgcgctgttcggtctctccctgatgtcgctgacgtgcctcgttgctgcccggcttggggctggtgtgttgttttctttttgtgtgtagatgtggagaagttctaccagctctgcgacccaggtgagtcacgctcgatctcttcgcgtgtagggtttcgggcgctggagcaaccggtgttgctcgggatggggcgtcgcgttgctctgctgggagtctcggagctaaatttggtttgatttttttttggctgctgtgctctgcgttggtagtagtaggctagtagccctgtagctttcatcaatgcagtgactaattggggcgtgatgtgtgtttcgggttgtagattagaggctaatatggattgcttgctgatcgaaatagtatcagtggtaactcttagattttttttgtttgtttgttagctatttataattcagcatttgctgttgttaggatatggaggaatttgaggagagtatcaatgtggggggtaaatggactctcccacttgctgattcttgattttttttttgggctgctttgtctgattcaaagctgtttcccagtcaatgcagtgtagggtcatcatccatttttgaattagttagatgtttttactgaaattagctagccttcttgtgccattgcaagtgtgaggccgcttcatttatgctgcctgttagtgtatgcaaccaacattaactttctttctttgtcttgcgtagattctgcttgccttttgcataacaagtgctgcccggacataactcttatgtgtctactaattcctttcattcgaacagaaaaggagaacttgtgcctttatgggtaccctaatgaaacatgggaagttaccttgcctgctgaggaagttcctccggagatccctgaaccagctttaggaatcaattttgctagggacggcatgaatgagaaagactggttggcactagttgctgtccacagtgattcatggctactggctgttgcgttttatttcgcagcacgatttgggttcgacaaagaggccaggtaaattcaatgattatcaaactttttcttgcagaaaaatgtatggatgtagctccatgtttttttattggatgcatttatgtggatttcagctacaatttagtcttgtacctatagaaatgtaagcatgacttaagtacctcattgctagcttctgattctcatcttaagttgttgtgattctcctctcttcagtgttttttttatttctgttgcaatgtttagatgttctctcttaggaaaataccccatgaaaatttattttgttgaggttgactccttgatcagcttaatcctgcatggctgaagaacaattaacccaactggacttttaacatcgtggtaactaaaaaaaatcaccttgttcatgtttgatactaggaaaaaaggtcacgccagaaatggtaacagcacatgcattgacgcagagcatgtgcactgacttcctatgtgcaggcagccctgtgtatgaatttgtaggaagctttctttgctagaatggcagtaaacttcagagaaatatttgaaagattgcatccatggcctaaataagtttccaggccagctgcatggcatcatgtacttggtgaatgtggcatgctagagtattcaaagaattttgttttcttttttcaataatgtcaatccattgtaagcatgtccactgtccagataagggttgtggtttgtaatgccttgacagataatgaaactagtcccagtttcagaatgctcatctctaggtcaagttcaagaatcttatgccaagaggcaaaagtgatgaaatccaaggctgaatgaacagcaatttcacgagccaaagttttggtcacccacattatgggtaaattgtctatctgttattttctggaatatttttgtttgatatggatagttccacagaaaatggaaatatgcagctcaaacctgcagtttggttctgcatgcttcaaaaatttgtatgtggcacacaatacaaaataacctctcttttctttttgcataatgcacatatgaacaattttttgtgctaaagtttgcagatgcacatgttttacatatatgagttttttaaggtttttttgaagtgaacaagtatacaaaccaaaatacagaccaaaataggttaattctacatactccctccgtcccataaaaaaccagcctaatactggatgtgacacatcctagtactacgaatctggaggcagattcggcagattcgtagtactaggatgtgtcacatccagtcttagattcgtttttttcgggacggagggagtaggagcatagtgtccacttcagggttttaagattgtgtacagagttacaaaagctagtgcattcttaggggcatggtttttctgtatattcaagctgtttacttctgatatgatggctgtactttctttagtgttgaaactagaaacacaaacaaaatccttttatggtaacaaactgaacataagacgataaggctgaaacagtctacacaaatgatgtgcacagaaagtgaatgtgctgtactgataattatctagattcagataacttgtttgttgtactgatcatgcaattcatttgtcatttattttaacaagatctattcagttaagtttctgtagctcaaaacaatcttgaatctttcttttgctttagtagtttagttacaaatttcctaatcacctaatgctattgcttgagtagttatacattgggtgatcccattggctagattctggagagagaagccaataagttgctacttgcgtcagtgatctagctatcctatagtgggtttgtggtcatgatagttgtgctattgagacgagtcctacttgattacctaaacaatatgacatctctttcaccaaatcatattcatcacattcaacatttgagtgaaaacttgggtttttggcattcaaccataagtccataaccaagttcagctacatttggaggttattacttccaggtttggaatttcttctctaaacctgccagtttcatggtgttgatggaaattctatggatatatctaggtggtctgaggtgtttctttatgcattgcaacgaaatacatgtaatcaataggccattagtaggaaaatgtgtgaacttacaaatacacaagtacgcaagaaaaacaaaacaaaattgcagcctgtccagtttatatgaagttgagggttaatggggttcattcctcctgcagcagaagctaaacttgatcacagctttatccttttgcataacatttagtaaatgttaaaataaatcatgaaataattattaattatacaatggcatttggtttgtgcacccatcactgaaattctaccaaacagtgagcaatgagcattatcctgctattactgggagtttgggatcctagagcaatccatatatgaccaaaaggatcatagagtaaacagtagatggtttttctgttgtgctaactaaactttgcctttatcacgtgcaattttttttgtacgtgccatctttttatgggcatgagaaaatccatttttttatggagaggctaaattgagtgcattttcattctgcaattcaagtcgttttgaaacatctgctatgtttctcttacaggaggcggctcttcaacatgataaataacttacctacaatatttgaagttgtgactggcgctgccaagaaacagaccaaggagaaggcgcccaacagtaccaacaagcccaacaagcccagctcaaaaatggtatcttcatatactcttttgctgcctgcggtgcagcacagcgcttataattttctctgtttgtagcaaccaagaccagagtctcattcaaaggctccaaaaccacctgcaccccccaaggatgatgatgagagcggcgatgagtatgcagacgaggaggaggaggagcgcgacaacaccctgtgcggatcttgtggaacaaatgatggcaaagatgagttttggatctgttgtgatagttgcgagcggtggtaccatggaaagtgcgtgaagatcacacctgctcgagccgagcatatcaaacactacaagtgcccagattgcggcaacaagagggcaagggcatagagacaagcacaaacaagcagcagtcggaacggaaaccagcgccaaatcgttgagatgtctgcagatatggcctagctttgtagcccgtagacttggttttccatttcaaatcaaaacactgttaatttaatcgtgccccagctgttcgtgttgctctgactttaattgtgcttaaaactcttggtcgctgtagtaatattagcttcatttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0419100, RefSeq:Os05g0419100