Os07g0669000

From RiceWiki
Revision as of 20:41, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os07g0669000

Description

Similar to Catalytic subunit of polymerase zeta

Version

NM_001067119.1 GI:115473970 GeneID:4344230

Length

1991 bp

Definition

Oryza sativa Japonica Group Os07g0669000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:28918577..28920567

Sequence Coding Region

28918629..28918761,28918897..28918979,28919626..28919683,28920291..28920340,28920417..28920533

Expression

GEO Profiles:Os07g0669000

Genome Context

<gbrowseImage1> name=NC_008400:28918577..28920567 source=RiceChromosome07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008400:28918577..28920567 source=RiceChromosome07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgcctcctcctcctcgccgccggggaccgcctccccggtgctcagcgtgcggatcgtctccctcgactactacatggcgccgcccctccccggattcgacttctcctacagccacttccacggcggagaggtggaggaggtgccggtgatcaggatctacggctccacccccgcggggcagaagacttgcctccacatccatcgggtccttccatttctgtatgtaccttgcaaagaggaccttcttcataacgtcgaaaaaggtaattcatttatatctggtctattgagtgatcttgagaaagctttgcagattcgcagctcatcaaaaaagaagcatgtgcatggatgtacccttgttcgagcaaaaaagttgtatggctatcatacatctgaggaactttttgtgaagatttatttgtatccataa</cdnaseq>

Protein Sequence

<aaseq>MAAAASSSSPPGTASPVLSVRIVSLDYYMAPPLPGFDFSYSHFH GGEVEEVPVIRIYGSTPAGQKTCLHIHRVLPFLYVPCKEDLLHNVEKGNSFISGLLSD LEKALQIRSSSKKKHVHGCTLVRAKKLYGYHTSEELFVKIYLYP</aaseq>

Gene Sequence

<dnaseqindica>53..185#321..403#1050..1107#1715..1764#1841..1957#cattcaactcgcgcaaaaccgcggcccgccttggccttgtgcggcggcgaccatggccgccgccgcctcctcctcctcgccgccggggaccgcctccccggtgctcagcgtgcggatcgtctccctcgactactacatggcgccgcccctccccggattcgacttctcctacagccacttccacggtgcatttcccttcccccctctcttctccacccgcctctctcgacctccggctcgcccccctttgttccgtctctgtaccgcgcgcatgtcgagtggctgatgagttttgggtgtgtgtgtgtgtgtggatgtaggcggagaggtggaggaggtgccggtgatcaggatctacggctccacccccgcggggcagaagacttgcctccacatccatcgggtgcgtatgaccagcttctctgatgattttttgtttgtttgttcattcgtacttggaattagctaatttcgctcgtcatttttgattcaagacttcaaccgagtctgcgtgtgtttgatgctttgagcgtgagtgtgagtgacgctgtgaggctgtaacacatttgtgtaattgtgtttgcgggttggtagccatccgcagcaagtagtcctcctcatgtattatacagtattcgtgtacaacaattgatgctcgtggcctttgctgtctggattcaaatttgaaaatttggagggaaatgtgtcaatgtgcttatcctcactgtacgcgcaccaaattcgaagtttggagctccaatttcacttttgaagtcctcttatcctggatgagcttaaccttagttctctactccatatatttgatgtttgcttgtattatatgcaatatttaatactgtgtgcaatcattttttcttttgagtttggatatacacacgatgattagctctatcatatttcgaatttgtgttgttgaatgaatacagatatacttgattttctcatcttgcttttccccagaaagttattcagactattccattcatccttagttgttccaactagttgtttttcttttctgtatctaggtccttccatttctgtatgtaccttgcaaagaggaccttcttcataacgtcgaaaaaggtgattcattctttgtaatgcatcatgtacatgctattactgttgcttgtgcaatttgttacatggattattctatttggaattgtaccaatgattttctatccacattacctgaaactttttttctgatgattttcatatccacattagtacatcaccagaaactttaaattgcttgttatttatttatttatttattcatcttctaactgagtcttactgctatgtcacaaactttttagacactaattcctcttatccaccattgcaatttttatgaacttgatttatgatttgaaaggttacttcatatgtccaaagcttggccttgtatgcatctgcaacacatttagataatttagacagtatgctgaatcctttgtatgtgtctgtgccttggtgagcatctcttagattttattctggccaaaagggcagctgtgtctagaaatcaaacaggccttactttttctaaccaaatagcctaaatgtgttatttgctttaaatgttggtattgatgctccctgattaactgttgcttttaatgtcaagaacatcgcttgatgacaaggatgaattgttgactcttttgtgccctttctctaggtaattcatttatatctggtctattgagtgatcttgagaaagctttgcaggtattttgaagtccaattatttttttatggtatgaataccctgttgtattttttgatatcatcgtttttcttacagattcgcagctcatcaaaaaagaagcatgtgcatggatgtacccttgttcgagcaaaaaagttgtatggctatcatacatctgaggaactttttgtgaagatttatttgtatccataatttaattattttttaagaaaatatatttgctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os07g0669000, RefSeq:Os07g0669000