Os05g0420200

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0420200| Description = Protein of unknown function DUF179 family protein| Version = NM_001062111.1 GI:115463952 GeneID:4338823| Length = 31...")
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Gene Name

Os05g0420200

Description

Protein of unknown function DUF179 family protein

Version

NM_001062111.1 GI:115463952 GeneID:4338823

Length

3109 bp

Definition

Oryza sativa Japonica Group Os05g0420200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20602500..20605608

Sequence Coding Region

20602553..20602796,20603808..20603938,20604725..20605408

Expression

GEO Profiles:Os05g0420200

Genome Context

<gbrowseImage1> name=NC_008398:20602500..20605608 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20602500..20605608 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgggccctcaacctgaaggcgggcggcggggggccctgcctcacgccgaggcggcgccccctcgccgccggcgaggccgccccgtgctccgtggcggcggcgtgggcggggaggagggtcggggggaggcgcggcatggcgctggtggcggtgggcgcgtcggggaggaggggcaaggacggcccaggcggcggcgatggcggggacgatgaggccaagagcaaggcctcgtcttcttccggaaatgacgatgcggcctccacaggtgacagctctgatggattgaaccaactgcataacgaatccaaatccaatatctctaacagcaattactggagagatgtcagagcaaaccttgtgcgccgggagcaggagctcttggtagatccaagtgcacccgcagagcagaaaacatcatcaggagaaccagcacaccagcttcctcaaaagtgggctcaccctattacaatgccagaagcagggtgtgtcttggttgctaccgaagtgcttgacgatgatagcatcttcgaaagaactgtcattctcctccttagactaggttccagaggcacatttgatagcccgtttggagtcatcctgaaccgtccactctacacaaagatcaagaatgtgaatccatcattccaggaccaggcaactccgttcggtgactcccccctcttcttcggaggccctgtcgacatgagcatgttcctggtgagggccagtgacaactctcgtctcaaggggttcgaggaggtcataccaggcattcgctttggcttccggaccgacctagagaaggctgctgttctgatgaagagtggggcaattaagagccaggacctgaggttcttcgtcgggcacgctgcgtgggattacgagcagctgttgagcgagatcagggcaggatactgggccgtcgcctcctgcagcacggagctgatcagcgatgcactgacaggcgatccttcttgtctctggaccgagatattgcagctgatgggagggcattactcggagctcagccagaaaccaaaggaagacaaccagtag</cdnaseq>

Protein Sequence

<aaseq>MWALNLKAGGGGPCLTPRRRPLAAGEAAPCSVAAAWAGRRVGGR RGMALVAVGASGRRGKDGPGGGDGGDDEAKSKASSSSGNDDAASTGDSSDGLNQLHNE SKSNISNSNYWRDVRANLVRREQELLVDPSAPAEQKTSSGEPAHQLPQKWAHPITMPE AGCVLVATEVLDDDSIFERTVILLLRLGSRGTFDSPFGVILNRPLYTKIKNVNPSFQD QATPFGDSPLFFGGPVDMSMFLVRASDNSRLKGFEEVIPGIRFGFRTDLEKAAVLMKS GAIKSQDLRFFVGHAAWDYEQLLSEIRAGYWAVASCSTELISDALTGDPSCLWTEILQ LMGGHYSELSQKPKEDNQ</aaseq>

Gene Sequence

<dnaseqindica>54..297#1309..1439#2226..2909#actcccactcccacgcttctctcctcctcccccatctccgcgcggccacggccatgtgggccctcaacctgaaggcgggcggcggggggccctgcctcacgccgaggcggcgccccctcgccgccggcgaggccgccccgtgctccgtggcggcggcgtgggcggggaggagggtcggggggaggcgcggcatggcgctggtggcggtgggcgcgtcggggaggaggggcaaggacggcccaggcggcggcgatggcggggacgatgaggccaagagcaaggcctcgtcttcttccggtgagagagactccccttttccgacaagtaaaaattgtacccccaatttttctggagccgggaaaaaggtgggatcttggcgcgattggaaaaagaaccttttctcgtatatgccatgcggttggggaattggggaattgggcggggtgacatgctccaaattctccggccggtggtggtctttttgtgcaactgattgacgagacagcagtggaaatttgggttaaattagcgaaattggaagagtaatctagtcactagctaattttatctaaccctgacatttttgtgatcgaattggttctgatattgattagtagcttcttcatttttctagataatggattaaaacctggattctacattcaaaatggatgtatgcagagccatgatgggaactgggagatattgcattcggggttcttgtagtgaaatctggtgagtgtttagaatagaatctgtgcgtgccccattgctcgtagttcgtctttcgagttgcattagaatagaatctttcgagtgtttagaatagttttgtattgtggacactagtaattggatggaactctcctaatttagatgatttttgctccagtttgtgtctaagctacttaaggcagtgttatttttagttattcttggatgaaagctgatgaattatctaattatttatagggaagaacaaagtactacattttataaacctaacaaataacttagagcaagaggtctaagcaacgcaatagaagaaagtttcttgagaaaatgtatttatagaagagtggagcaaatagtcacagcaataatccagtgaataaggataaaagaacggggtataaaggaaatgcatgataacgtgtttacacggatggcagtaggacagggaaacttcacgccgtctacagaacaattcatgtttgctttcgtatttctgtagtatattctagttaaaaccatgaactgaaatgttgacctggttggttgtgctgaaatgatggcttttttatacaggaaatgacgatgcggcctccacaggtgacagctctgatggattgaaccaactgcataacgaatccaaatccaatatctctaacagcaattactggagagatgtcagagcaaaccttgtgcgccgggagcaggtgaggccaacctgttcttacttaccttatatcgtgctcataacttgtctttaaattgttgccaacataaggacaaacatttagggcatccaggcatttatgattgcacctgctatgggtcctttattctctgccaagaaaattgggaatggtgtgttgaacttagggtgtgtttagttcctgaaaaaagttggaagtttggggaaagttggaagtttggaaaaaaagttggaagtttatgtgtgtagaaaagttttggatgtgatgtgatgtgatggaaagttggaagtttggggtagttgggggtgaactaaacacggctttagcttgtatcactgatcacaactcactagagaactccaatttctatatgaatatgtagtatattttctccagttagtacattgcataagaatatggctttcaaccagttagtacattgcacaagaatatggcatgaatatattacatgttcatatgaagtagttgcctagttgttatcaaatgggaagaatattcatgcagaaaaagcacacatatcaatcttcttcaccgccttattgttccttgatattggctgctagatgaagattttcatcacataggttcctattttacaattttttacatgtttcttttcatattggtacaaaataatttcaaattgctcatagctgagcacagaaattcctgaaacgaaagcaaaaggaaactgccttgtaactagcccactcatatcttcaattgattctctgtgcttttcttaaaaaccattctttgaagcaggagctcttggtagatccaagtgcacccgcagagcagaaaacatcatcaggagaaccagcacaccagcttcctcaaaagtgggctcaccctattacaatgccagaagcagggtgtgtcttggttgctaccgaagtgcttgacgatgatagcatcttcgaaagaactgtcattctcctccttagactaggttccagaggcacatttgatagcccgtttggagtcatcctgaaccgtccactctacacaaagatcaagaatgtgaatccatcattccaggaccaggcaactccgttcggtgactcccccctcttcttcggaggccctgtcgacatgagcatgttcctggtgagggccagtgacaactctcgtctcaaggggttcgaggaggtcataccaggcattcgctttggcttccggaccgacctagagaaggctgctgttctgatgaagagtggggcaattaagagccaggacctgaggttcttcgtcgggcacgctgcgtgggattacgagcagctgttgagcgagatcagggcaggatactgggccgtcgcctcctgcagcacggagctgatcagcgatgcactgacaggcgatccttcttgtctctggaccgagatattgcagctgatgggagggcattactcggagctcagccagaaaccaaaggaagacaaccagtagatgctgctcatatgtaccatgacaaacagctaaaggttgtatctgtcctgtacataattgaaataggataaatctcacctagtacaactctagtctcatgccctccatgcttcttgtagcaactagcaactgctatgtatgcaactattgaatatgcatttatcatgctcaaataagctctgcacgatgattgcgaatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0420200, RefSeq:Os05g0420200