Os05g0422600

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0422600| Description = Conserved hypothetical protein| Version = NM_001062123.2 GI:297604532 GeneID:4338838| Length = 8444 bp| Definition ...")
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Gene Name

Os05g0422600

Description

Conserved hypothetical protein

Version

NM_001062123.2 GI:297604532 GeneID:4338838

Length

8444 bp

Definition

Oryza sativa Japonica Group Os05g0422600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20733859..20742302

Sequence Coding Region

20733859..20734023,20735334..20735684,20736714..20736761,20737102..20737242,20737371..20737493
,20738222..20738308,20738686..20738798,20738900..20738999,20739273..20739657
,20739897..20739973,20740557..20740649,20740753..20740830,20741979..20742302

Expression

GEO Profiles:Os05g0422600

Genome Context

<gbrowseImage1> name=NC_008398:20733859..20742302 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20733859..20742302 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgagcccgtggtccccccgcgcgcccccgcggcccacgccgcggtcgcggcgccgaagccgccgggagatgcggtggcggcggagggcgaggctagggcgccgccgcggccgccgcctgcagtggcggcgggtgcgggggcgggggcgagcgggggagggaggcgggtgttctccgtggagctacggcccggggagaccaccattgtgtcgtggaggaagatgctcaaggaggctgacctcggagctgccttgccgcccccgccgccggcggcggcggcacagccggcggtcgcccccctccctggaccatctggtgcgacacatcctacagaaaatgactgcgcacaatcaaatcggttcaattcagttattgagaaaattgagcgcctttacatgggcaaaaatagtagtgatgaggaagacttggatgatgcgcctgatgatgatcagtatgacacagaagattcgtttattgatgatgatgaattggatgaatattttgaagttgacaattttgcaaccaagcacaatggttattttgtgaacaaaggaaaattggaacaaattgactttgattcagtacagactgttgaaccaaagaaacgaagacgaaaagactcatcaagttcttatattgagaataacaaggaattttctccaggctcttcctcatacatgggcacgcctttaagagactctaaaagaagcactctccaaacggggaagagtactagtaatggtcacaaatctggagctaatggaacatttgagtacccttattcagcataccgagacaaggatgctccaggacatcttggcctccaacagaaaataacttctaatggggcgaaccaagatttgtcaaagaacatgcaccacaaagagaaatataatgctggtcaattttctggtttgcatgcttccagtaacatctattcaacagaaacaatgcacttggccacaaaaatccatacagaaggttcaggtaccaagaccaagggtaccagacttgagcgagctatccgtgacctccaaaacattgtcactgaatacaaaccacagattcttgatgtacatgaggctgaggcaaattgccaggtagcagttaaaagaagattgccacaagaagtaaaacaaaaacttgctaaggtcgcaaggttatcggcaaatcaaggaaaaataccagaacatgagctgatcaatcgcctcatgggcatagttggccaccttgtgcaccgtaggacactgaagagaaacatgaaagaaatggtgcaatcaggtttatgtgctaaacaagagaaggctgggaaattgcaacaagtgaaaatggaaatctatgaaatggtcaaagcacgtctagccaccaaacctaagggtgctgaacataaggttgaatctatagatggctttcaggatcctgttactcatgatgacagaatggccttgagaggaaaatctgtcatggatgctgtattggaggacaggatctgcgacctgtatgatctgtatgttgagggtatggatgaagataagggccctcagagtcgtaagttgtatctagaggtccgcaatgaccagaggatgaagaggagaaggctggctgctgctgccaagttgcgtgacagcgaccctgccgccccacaatctgcacagtccctgcaaaatatgacaagcacccataccatgtatcctgtggttaacaatggaaatagtcagagtagcagaagtgtcgacaaagttaatgaaatgagcgtcggtgcaggatcggatggcaacaggagttctaccagcatgaagaaacgaaaaatagactctgaagataggcaagttaacccaccgaaggctactgctgaacttcatcatcatggtattgaaatacagaagccggcaaagcgtgcagatgaggcaacaaagagcgccgcggccactggcgacttgcaatggagcatcagctttcggggaaattggggaggaggacagccatcgccgaagcgttcgtggccatacttcttctggggccattcccaacccaaccacaacgcggcaaagaggcagcctgtgggggaggcgaaggcatga</cdnaseq>

Protein Sequence

<aaseq>MGEPVVPPRAPAAHAAVAAPKPPGDAVAAEGEARAPPRPPPAVA AGAGAGASGGGRRVFSVELRPGETTIVSWRKMLKEADLGAALPPPPPAAAAQPAVAPL PGPSGATHPTENDCAQSNRFNSVIEKIERLYMGKNSSDEEDLDDAPDDDQYDTEDSFI DDDELDEYFEVDNFATKHNGYFVNKGKLEQIDFDSVQTVEPKKRRRKDSSSSYIENNK EFSPGSSSYMGTPLRDSKRSTLQTGKSTSNGHKSGANGTFEYPYSAYRDKDAPGHLGL QQKITSNGANQDLSKNMHHKEKYNAGQFSGLHASSNIYSTETMHLATKIHTEGSGTKT KGTRLERAIRDLQNIVTEYKPQILDVHEAEANCQVAVKRRLPQEVKQKLAKVARLSAN QGKIPEHELINRLMGIVGHLVHRRTLKRNMKEMVQSGLCAKQEKAGKLQQVKMEIYEM VKARLATKPKGAEHKVESIDGFQDPVTHDDRMALRGKSVMDAVLEDRICDLYDLYVEG MDEDKGPQSRKLYLEVRNDQRMKRRRLAAAAKLRDSDPAAPQSAQSLQNMTSTHTMYP VVNNGNSQSSRSVDKVNEMSVGAGSDGNRSSTSMKKRKIDSEDRQVNPPKATAELHHH GIEIQKPAKRADEATKSAAATGDLQWSISFRGNWGGGQPSPKRSWPYFFWGHSQPNHN AAKRQPVGEAKA</aaseq>

Gene Sequence

<dnaseqindica>8280..8444#6619..6969#5542..5589#5061..5201#4810..4932#3995..4081#3505..3617#3304..3403#2646..3030#2330..2406#1654..1746#1473..1550#1..324#atgggcgagcccgtggtccccccgcgcgcccccgcggcccacgccgcggtcgcggcgccgaagccgccgggagatgcggtggcggcggagggcgaggctagggcgccgccgcggccgccgcctgcagtggcggcgggtgcgggggcgggggcgagcgggggagggaggcgggtgttctccgtggagctacggcccggggagaccaccattgtgtcgtggaggaagatgctcaaggaggctgacctcggagctgccttgccgcccccgccgccggcggcggcggcacagccggcggtcgcccccctccctggaccatctggtgcggtagggtttcgtgctctcgttacatgtttttttgccgatttctgtcttccgtgcctattctgcgtgcaatttttcacctgatcaagcctgaaaaccgcgggggattttgtgtgggagttgggaggtctgattatgattcttcaattagctaaatacgattttcaattatctatcatggtgaggccaaatgcagagccgagcataagttcgcaacagagaaaccgagaagtgacagcaaaagttattgagatttaacttaaaggaaagcatccattagctgttgccgccgcgagcacctttgcaaattggagggtgaaaagaatatgctcctctgcttcttttctatagcatcaaaatatatcatttctcaatgccagattgcccctcaccatgtctgcggtcaccagctttaccttgatgttgggatttcccactaggtaactaggctgcaccgattttgcatccgcatttcttctaacatcttaaactggtagtctggtacattggacactttaatagtgggaattgaaccctcaatcccacagttatgagccttgttggctactgctgctgtattgattactgatcaatgggaaataatctatcagtgggggaagaaggtcaagttatgaagacttgtttctcaaaaacgataagatctcaagacttgctacttatgtgaccatatgtaagaactacaaatgccatgcaaactttgttaagcttttattctgttggtagaatcaatatagcaggtccgttttgatgacaaaccagaattatggaaggggtttacgcatacactagaagtatgtgcattgtcttgcaatgatgcaacaatgatatattaattcctcgaaattgtctggtaagatgattaatgtaaactggaatactatacaagcaagatgtgtcatttgtaggcaataattcctatattttgttggaacttgtatcagacattctgataggtggtggttgtgcttactcatttgcaggtggtcattacccttacccatttgttgaattaaatcagcctaacttgtggttgtcttcacatatgattgcacagatcaactagttttttttattgaaattgaaataatgtactgtatttgaaataatggccattccatcttttgaatcagacacatcctacagaaaatgactgcgcacaatcaaatcggttcaattcagttattgagaaaattgagcgcctttacatggtaagaaacatatggtgttactatcagagaggaaattcatttttactttccattatgcacacgaaaagtgcttacctctgtctacatccttttactatgccagggcaaaaatagtagtgatgaggaagacttggatgatgcgcctgatgatgatcagtatgacacagaagattcgtttattgatgatgatgaattggttagcttttcaatttaattgatataataatgctctaatgtattgttaataaaatgttctttttcattggctcatctgacctaaacagtgttaatactgacattgtagtgctttgagttaagcttgttactatttgttttgccatgcattctgcatatgtgctactatcctgttatatgtatcataaataacagccttgacttcttggctaccattccatatgccaaatttgaagaacagctgagaatggcatgctcttataatctttcttttttcattgagctatttttctagtgttaggaagaatgagggtttattatcttgaattcaatatggtacttcactcaagttgcaacaagaaaaactgctactttgtgcaaaaccagaatgatctatatggctggaagaacttaactaccgacactaatttatatgcaaaccaaatgtgagcttacatgcttcttgctgcatatatctagccttgtttagaacatctcaatgattctttttctgtatcattaccatttgacatgctgagaatgatagccagtgttctgatcactctgttgttttttatccacaggatgaatattttgaagttgacaattttgcaaccaagcacaatggttattttgtgaacaaaggaaaattggaacaaatgtaattttcctaaaaactctttaatttgcagctatggtgttgggcaagttatgcataaaataatcccaccaaatgattctagaaggcattgtgcggtgtcatgactagctattcagaatgatatcatgtgggatgttataacataataacagtaatctttgcatcagtgccaacatgcattacatatctgctgttataggatgacataaatcttgacatgcttccacccacttttgcagtgactttgattcagtacagactgttgaaccaaagaaacgaagacgaaaagactcatcaagttcttatattgagaataacaaggaattttctccaggctcttcctcatacatgggcacgcctttaagagactctaaaagaagcactctccaaacggggaagagtactagtaatggtcacaaatctggagctaatggaacatttgagtacccttattcagcataccgagacaaggatgctccaggacatcttggcctccaacagaaaataacttctaatggggcgaaccaagatttgtcaaagaacatgcaccacaaagagaaatataatgctggtcaattttctggtttgcatgcttccagtaacatctattcaacagaaacaatggtaagaatcaaggaaactggtattgtgacttgtgagcatggtgcaaaccatagttatcttttcatccccaaagtacatagcactaatttattcagcacaaaagcattacaacataagacatggaagtaaacagagaaaaactgccacacgcatatgcagcatgtttagtaagtgtcatgaaatgtgttgtctgtcaactgctataattctgtcgagacaattatgccctaatttatgggacaattgctcaatattctatatttgcattttcagcacttggccacaaaaatccatacagaaggttcaggtaccaagaccaagggtaccagacttgagcgagctatccgtgacctccaaaacattgtcactgaatgtgtgtatcttattattaaaccttatatatcatggtggatatatttctaagccccttttggaattaactttggcttttgttgcgtggaatcatcctcacagacaaaccacagattcttgatgtacatgaggctgaggcaaattgccaggtagcagttaaaagaagattgccacaagaagtaaaacaaaaacttgctaaggtcgcaaggttatcggtatgttgtagcacaccctattttaccttgtagtgaagtgcctttgtttacttacggcccacttagcaatgtttctaaggctagagtgtaactgtgtccgttcaatatttgttagatttgaaacttgatatagaatgcatgtgtcgagtcatggtaatcgctatgtttattaggagggattacagagatgcattcatgcattaacttcctatgctgctgcagtagattatgtgaatagagaagcttgaagaagtacaaccttttgttttctgtattccaatgcaaatgttttgttctaactttttaatacaagtactggcaagtggcaacttgaacttcttaggcaacatatgacagcagaatattgacaaatgcaggcaaatcaaggaaaaataccagaacatgagctgatcaatcgcctcatgggcatagttggccaccttgtgcaccgtaggacactgaaggtgagtagaggtagtgattaaattcatgtccagtgtggtaggggcttattacaattattggtttgatgtataccttttatgcatgcattatgattattttcttgtccaattacttccatgcatttcattttttttaaaaggatagtatcttttgttgcttttccaattctgggtcgtctattatctctgtctggaaatgatctttatttcttgaacattgaaaaaaaaatcataggatgttgtgatctaatcatccattgataaaggtagcctgtagattcattgagatatttaaacgagtgctagttaggtaacaagagatagacactctttttgtccagttctttatgcatcgttttcgtaggccttgggcaccagtacaaatattccactctttttatgtggtttcttgaactattcttatattctacaactaagtggattctagattcctgttggcatgctgaaatcttttttttttttttttttggaggggggggggtgttgcatctaaggatttgttcttgcctttgtttgtgttgacaggcatgggctttgttactctttagtaagcgtggtagaataaatatatgttgcatagtgatcctgtcaaatgaacatatattcaaaagacataccaagaggcaccggcaaaaagaatctccttgtgttgtatggtgacttggtgagttttaaagattttacttaccaaatgttttttggcacagagaaacatgaaagaaatggtgcaatcaggtttatgtgctaaacaagagaaggctgggaaattgcaacaagtgaaaatggaaatctatgaaatggtcaaagcacgtctagccaccaaacctaaggtgaaataattaccttgtcagtaaagtggtgtaatctgctttattttcagacacattgcgttttgttccagtcttcattcttatgaaaagctttggtagtaggaactcttatatctgtatgctttcagggtgctgaacataaggttgaatctatagatggctttcaggatcctgttactcatgatgacagaatggccttgagaggaaaatctgtcatggatgctgtattggaggacaggatctgcgacctgtatgatctgtatgttgaggtatagtcgtattatcatgtttacttcaatgataattgcaatgcatagccaattgcccaattgctgtgctgaaagaacgacatcagcaatagagacattttctctattttattttaccttttgtctatttttaagtgtatgttggtgaaaggatatttttttatttcccccttcaataaggaggccgctagagttggtttagaacaggagtgtcttggataaagtcttatcgttttgcttttttacttattttatatgtagtatcgcttggaagttcaaaaccatgtatttttacaaattgtgattatgcttactagcatgagtaatgcatgcttttcagggtatggatgaagataagggccctcagagtcgtaagttgtatctagaggtaccatcctgcctcttttaccacacctttttatttctgtgattgctaaaaaactcctctacatttatatgtgcctttagtctgattgagtgtttcaacttgaatcaatggattagaaaattccagccttccctttctgattcactacgcagtcacactccttagacagactgttgatcatgaactttattttccttaactcacttttatatttgtaaatttgtaatgccgacttgcttatgtatgttgggataaggggctaatttttgaccagcaaacgaattgcactggtatattgtgtcaaggatagcactttgttacttagtttaaagtgcctgtaagcaaagcaacataatttgagtttgtatgatcccttagcttgtttatatatccaactatccaagtttgctaaacagccttaagttccttaaatatttatttagctattcataattatcaaagtaaatgtataccctgttaatttctataatggatttgttttctttcagaaactttaaattttatcacccgagcatatgaatttggtattttggttgtgatcgttctctttgtgtaccgtactgtgctttcagtaaaagctgggtgaaagcctttcctctaaaattttttttgggtattttggtgatgttctgtttcaaagtgcattttttgtacaacttctccagttttcctagcgaatgtgattatacttgtccataacgctcatacaaattacaatatctttgtttctgcaccagcttgctaacttatggccacatggcgacatggataaagttggaattcgagatgccatttctagatctaaggagcgaaggaatttattatataggcagaggaaggtgaaagatcttctcttaaggcgtgaatgccattttagcttaaccatgtctttatttttaaccgtcataatcatatggagtgaaggaaaacaagtgtacaattcagtaatgtaaatttccaaattatcctattttatagtacctcattcaaaccaatcatgccattcaggtccgcaatgaccagaggatgaagaggagaaggctggctgctgctgccaagttgcgtgacagcgaccctgccgccccacaatctgcacagtccctgcaaaatatgacaagcacccataccatgtatcctgtggttaacaatggaaatagtcagagtagcagaagtgtcgacaaagttaatgaaatgagcgtcggtgcaggatcggatggcaacaggagttctaccagcatgaagaaacgaaaaatagactctgaagataggcaagttaacccaccgaaggctactgctgaacttcatcatcatggtattgaaatacagaagccggcaaagcgtgcagatgaggcaacaaaggtcagtaaccttccccagacgctgcttgccattccaagcagcgacagtcgccccagcagcagctaacgtcctgatcgtgctggcatagctttggagaacaaaataaatcatcggcaaaggtcgttgataaccaatatagtagaacacactagctaggtgattgctactgggatgctctcggagcctatttgttggcttctgagcaaccactaattcttgaagatcttgtttgatactaaaaataaggtgtatttataagaaccctctgtaacacaatgtctagccggtttcgtttttactgttgctgttatattctgcacttcactctgatagcctgcaacgtagataatttcatctttagattgccatttttcttcccctcttagactataaattgagaaaaacctagctctgtacaatctagatcgtcaatatatctcggaagcactttttaggtatggatatattcacagaataaagtgttgtgtgaatcattctgctgtcaaatctggtctcttgatttttctagaggcaagttatgcaatttatgtactacttccgttttttaatagacaccgttgactttttatcacatatttagacaatttatgtaattatattttctttttttagttgttttaaataagacgaatgatcaaacatgtgtttagaaaatcaacggcgtcgtctattaaaaaacgaagcgagtagtaacttttttgttagtgatatagcaatttttttccgttttataccccgtcctttctataaaaaacaactaagtacgaagtaccaattcgtagttggaatgtcctccatccgtctcatttttttatccaattttggtcgtttgtgttatttgaaattcttttatgattaatatttttattgttattagatgataaaacataaataatactttatgcgtggcttatgtttttattttttaaaaaaaaattaaataaaacggacgattaaagttggaaacagaaactcatggctgcgcttaaaatgagatagattgagtacgtaattcgcacggggcctttttcttggaataagttcatctgcggtcccttaactttacgtcgagttttgttgacgtcccttatctccaatattagaaatctccaccctaaactatacaaaaccgtacaatttcgatcccatggcagtatggatccttgatttcgctgatgtggcatcatagtcagaaaaaaagaaagtgcgtggggcccacatgtcgaagccctctcctcttttcttcccaagccggcgttggcacagcctctggcgctccctcggtgtagagcgccgcggccactggcgacttgcaatggagcatcagctttcggggaaattggggaggaggacagccatcgccgaagcgttcgtggccatacttcttctggggccattcccaacccaaccacaacgcggcaaagaggcagcctgtgggggaggcgaaggcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0422600, RefSeq:Os05g0422600