Os05g0423400

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0423400| Description = Similar to PISTILLATA-like MADS box protein| Version = NM_001062125.1 GI:115463980 GeneID:4338842| Length = 2303 bp|...")
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Gene Name

Os05g0423400

Description

Similar to PISTILLATA-like MADS box protein

Version

NM_001062125.1 GI:115463980 GeneID:4338842

Length

2303 bp

Definition

Oryza sativa Japonica Group Os05g0423400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20766336..20768638

Sequence Coding Region

20766418..20766620,20766757..20766823,20766920..20766978,20767145..20767247,20767375..20767404
,20767517..20767561,20768202..20768342

Expression

GEO Profiles:Os05g0423400

Genome Context

<gbrowseImage1> name=NC_008398:20766336..20768638 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20766336..20768638 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggcgcggcaagatcgagatcaagaggatcgagaactcgacgaaccggcaggtgacgttctcgaagcgccgcgccgggatactcaagaaggcccgcgagatcggcgtgctctgcgacgccgaggtcggcgtcgtcatcttctccagcgccggcaagctctccgactactgcacgcccaagaccacgtccgtgtttcccccgctgtcaaggatcttggagaagtaccagaccaactccgggaagatactctgggatgagaagcacaagagcctcagcgcagagatcgatcgtgtcaagaaggagaacgacaacatgcagatcgagctcaggcatatgaaaggggaggatctgaactccctgcagcccaaggagctgatcgcgatcgaggaggcgctcaacaacggccaggccaatctgcgggacaagatgatggaccactggaggatgcataaaaggaatgagaagatgctggaggacgagcacaagatgttggcttttagggtgcaccagcaggaggtcgagctgagcggcggcataagggagctggagctcggctaccaccacgacgacagggacttcgcggcctcgatgccgttcaccttcagggtgcagcccagccaccccaacctccagcaggagaagtag</cdnaseq>

Protein Sequence

<aaseq>MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVG VVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKE NDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLED EHKMLAFRVHQQEVELSGGIRELELGYHHDDRDFAASMPFTFRVQPSHPNLQQEK</aaseq>

Gene Sequence

<dnaseqindica>83..285#422..488#585..643#810..912#1040..1069#1182..1226#1867..2007#accctcttgtttcttcgagagcgaggtgaagatttgtttcttggtttgtgttcttggagtggaggaggaggaggagttggatatggggcgcggcaagatcgagatcaagaggatcgagaactcgacgaaccggcaggtgacgttctcgaagcgccgcgccgggatactcaagaaggcccgcgagatcggcgtgctctgcgacgccgaggtcggcgtcgtcatcttctccagcgccggcaagctctccgactactgcacgcccaagaccacgtccgtgtttcccccgtctctctctctcctcttccttgtttttttttcttttcttcttttcttgctcttaatttcagtgtttcctgagatatgcatgttctctttgcattgtgtttggcctttaatttgatttgtttttttggcgttttaggctgtcaaggatcttggagaagtaccagaccaactccgggaagatactctgggatgagaagcacaaggtgcgtgcttttctggattattttttttccaaacttttattcctacaaaatcgaatagaaatgcttaaaaaaatgtattcttggaaaacgtttcagagcctcagcgcagagatcgatcgtgtcaagaaggagaacgacaacatgcagatcgagctcaggctagtgtcccaacttattactatcatgcatctttatttctttcacttcctattaattaaagagacaactataaatcacccattgtagcgttttcagctttagattttgctcttgttggggacatcagggatggtggtgatttgtcaagcctgttccatgttgcaggcatatgaaaggggaggatctgaactccctgcagcccaaggagctgatcgcgatcgaggaggcgctcaacaacggccaggccaatctgcgggacaagatggtgattactgtctttgaagcttgatgtttacttcagcatggcatgcagagattgcaagtgccgcatctcttctttttcagagagagtttttgtttctgatgtcacctttgtttccatgatgttgcagatggaccactggaggatgcataaaaggaatgtatgagctctagatatctggatgattcttgtgcttcttttgtggatgatgaagtcaatatcttttgcaagctctgatcactcacctcacatgtctctgtgttcggcttcaggagaagatgctggaggacgagcacaagatgttggcttttagggtggtaatttccttcagagtaacttgtttttctattgaactttcacttgaaaaattccttgtgttctcatttctatttctaaaaaccatctgaaattgaggacaaataccatctgatataactgctctaactgttcaactaggttcgataataagtgacccttcgtagttgcgcctatcactactttagctatttttcagtgccatgctcattctaatgcggtcacttagatcactggtcaatattcaatcagaaccattctacgcaacaaatctctagactaactacccctgcattcagaattcatatagcgattgaaaattgaactccgtgcacggtagtagtagtagtcagatctattgtttctaatcaattgctatatggattcagaatgcaggtgtagtttgttcatatatgacaaaacatcctattgaatcttgaccagtgatctaattgactgctccattagatgttatcatctatgaacaaactacccctgcattctggatccatatagcaattgatcagaaatgccagatctgattactacttccctgcacagagctcaaacctcagtgagggaagctttactgaaagaagcctgaaagctgagagttcactgagctcctccccgtgttttcagcaccagcaggaggtcgagctgagcggcggcataagggagctggagctcggctaccaccacgacgacagggacttcgcggcctcgatgccgttcaccttcagggtgcagcccagccaccccaacctccagcaggagaagtaggctgctgagcactgccaatttggctgaacctcctgcttgctagctttgcatttcctcatgcgctgctagatgtatctgtggtttctctcatgcctgtctgaatgaactcacactgatgagagggtgtcagttgttttgtgctcctcccagcattagcactcagaattcagaaatgactcaatgtcagttgcttttgtgcttctcccagcattagcactcagaattcagaaatgactcaatgtcagttgcttttgtgcttctccctgcttgtttaattagccactgttcttgtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0423400, RefSeq:Os05g0423400