Os05g0423701

From RiceWiki
Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0423701| Description = Glycoside hydrolase, family 9 protein| Version = NM_001187501.1 GI:297724132 GeneID:9269477| Length = 1312 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0423701

Description

Glycoside hydrolase, family 9 protein

Version

NM_001187501.1 GI:297724132 GeneID:9269477

Length

1312 bp

Definition

Oryza sativa Japonica Group Os05g0423701, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20775079..20776390

Sequence Coding Region

20775198..20775953

Expression

GEO Profiles:Os05g0423701

Genome Context

<gbrowseImage1> name=NC_008398:20775079..20776390 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20775079..20776390 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtacgtcacctccagctccttcctgctgctcacctacgccaagtacctcgccttctccaagacgactgtctcctgcggcggcgccgccgtcacgcccacgcgcctccgcgccatcgcgcgtcggcaggtggactacctgctggggagcaacccgatgggatgttcgtcggcgctgccatcggagggcccaacatgcaggactagttccccgaccagtgcagtgaccacgagcactccgagccagccacctacatcaactcgccgctcgtcggagcgcttgcctacctcgcccactcctacggccagctcttctccggcctccccgccatcgcctacggcgtcctcaagcgcgccaacgacgttgtcgacgacctcctctcccagatcgacgccgccaaccgcgaccgcaacagggcgcaggagcagatggagcaccgcgccagcgccgtcggcggcgccgcgtcgttgcctcgtcgccgccggactcccacctcccccaccggcctcctccccacccgccggctgtgctgcctgtgagagaaaagaagaggagagaggaagagaggtggagcggggaggggaagaagagatggatatgtgggacccacgtgggtctcatgctgagtcagctgccacgtcggataaaactggagtgaaaatcgctgagggacttagtttgcactggttttgtaagttgagtgatgcgttatatccggttttatggttctgggatgattttgtaactcgatga</cdnaseq>

Protein Sequence

<aaseq>MQYVTSSSFLLLTYAKYLAFSKTTVSCGGAAVTPTRLRAIARRQ VDYLLGSNPMGCSSALPSEGPTCRTSSPTSAVTTSTPSQPPTSTRRSSERLPTSPTPT ASSSPASPPSPTASSSAPTTLSTTSSPRSTPPTATATGRRSRWSTAPAPSAAPRRCLV AAGLPPPPPASSPPAGCAACERKEEERGREVERGGEEEMDMWDPRGSHAESAATSDKT GVKIAEGLSLHWFCKLSDALYPVLWFWDDFVTR</aaseq>

Gene Sequence

<dnaseqindica>438..1193#gtgctctccaacaagaggcggtgcgcgcgaccgcagggtggtgcagccggcgacgacggctcccgggtggcggcgcgcgggctcaaggcgacgcgagctcgccgccctccccgtccccctcgtgcgatcggcgatggcggcgcggctgcggccatcatcaccgggagtccgtcggagatggcgcgcggctgcggccggcgggggaggcgggagtccggcagcgaggcggcgacggcgacgacgcgacgacgaggaccctctcgcgccccctacccctccctccacctcctcctcccaaaaatccccatccggccatccccttcacaaccccaacccgacagcttcatatgctccatggtgcccggcaggccggcacccccacggactagacgcagtacagccgtggcggcctcctcttcaagctcagcgacagcaacatgcagtacgtcacctccagctccttcctgctgctcacctacgccaagtacctcgccttctccaagacgactgtctcctgcggcggcgccgccgtcacgcccacgcgcctccgcgccatcgcgcgtcggcaggtggactacctgctggggagcaacccgatgggatgttcgtcggcgctgccatcggagggcccaacatgcaggactagttccccgaccagtgcagtgaccacgagcactccgagccagccacctacatcaactcgccgctcgtcggagcgcttgcctacctcgcccactcctacggccagctcttctccggcctccccgccatcgcctacggcgtcctcaagcgcgccaacgacgttgtcgacgacctcctctcccagatcgacgccgccaaccgcgaccgcaacagggcgcaggagcagatggagcaccgcgccagcgccgtcggcggcgccgcgtcgttgcctcgtcgccgccggactcccacctcccccaccggcctcctccccacccgccggctgtgctgcctgtgagagaaaagaagaggagagaggaagagaggtggagcggggaggggaagaagagatggatatgtgggacccacgtgggtctcatgctgagtcagctgccacgtcggataaaactggagtgaaaatcgctgagggacttagtttgcactggttttgtaagttgagtgatgcgttatatccggttttatggttctgggatgattttgtaactcgatgacaagttcagggaccttgggtgtactttttccaatcctggaattggtagctcggcaaaccagcccaacgatgctgccgccgccgaagaatctgatgacttcgcctccggcccattttcgg</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0423701, RefSeq:Os05g0423701