Os05g0424000

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0424000| Description = Similar to Amino acid carrier (Fragment)| Version = NM_001062127.1 GI:115463984 GeneID:4338844| Length = 2209 bp| D...")
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Gene Name

Os05g0424000

Description

Similar to Amino acid carrier (Fragment)

Version

NM_001062127.1 GI:115463984 GeneID:4338844

Length

2209 bp

Definition

Oryza sativa Japonica Group Os05g0424000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20785885..20788093

Sequence Coding Region

20785993..20786122,20786204..20786437,20786514..20786607,20786691..20787723

Expression

GEO Profiles:Os05g0424000

Genome Context

<gbrowseImage1> name=NC_008398:20785885..20788093 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20785885..20788093 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggagaacggtgtggtggcgagcaagctgtgctacccggcggcggccatggaggtggtcgccgccgagctcggccacacggccggctccaagctgtacgacgacgacggccgcctcaagcgcaccgggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgctcttctcgttcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcgacgagagcaccggcaagcgcaactacacctacatggacgccgtgaacgccaacctgagtggcatcaaggtccaggtctgcgggttcctgcagtacgccaacatcgtcggcgtcgccatcggctacaccattgccgcctccattagcatgctggcgatcaagcgggcgaactgcttccacgtcgaggggcacggcgacccgtgcaacatctcgagcacgccgtacatgatcatcttcggcgtggcggagatcttcttctcgcagatcccggacttcgaccagatctcgtggctgtccatcctcgccgccgtcatgtcgttcacctactccaccatcgggctcggcctcggcgtcgtgcaggtggtggccaacggcggcgtcaaggggagcctcaccgggatcagcatcggcgtggtgacgcccatggacaaggtgtggcggagcctgcaggcgttcggcgacatcgccttcgcctactcctactccctcatcctcatcgagatccaggacaccatccgggcgccgccgccgtcggagtcgagggtgatgcggcgcgccaccgtggtgagcgtcgccgtcaccacgctcttctacatgctctgcggctgcacggggtacgcggcgttcggcgacgccgcgccgggcaacctcctcaccgggttcggcttctacgagcccttctggctcctcgacgttgccaacgccgccatcgtcgtccacctcgtcggcgcctaccaggtctactgccagccgctgttcgccttcgtcgagaagtgggcgcagcagcggtggccgaaatcatggtacatcaccaaggatatcgacgtgccgctctccctctccggcggcggcggcggcggcggaaggtgctacaagctgaacctgttcaggctgacatggaggtcggcgttcgtggtggcgacgacggtggtgtcgatgctgctgccgttcttcaacgacgtggtggggttcctcggcgcggtggggttctggccgctcaccgtctacttcccggtggagatgtacatcgtgcagaagaggataccgaggtggagcacgcggtgggtgtgcctgcagctgctcagcctcgcctgcctcgccatcaccgtcgcctccgccgccggctccatcgccggaatcctctccgacctcaaggtctacaagccgttcgccaccacctactaa</cdnaseq>

Protein Sequence

<aaseq>MGENGVVASKLCYPAAAMEVVAAELGHTAGSKLYDDDGRLKRTG TMWTASAHIITAVIGSGVLSLGWAIAQLGWVAGPAVMLLFSFVTYYTSALLADCYRSG DESTGKRNYTYMDAVNANLSGIKVQVCGFLQYANIVGVAIGYTIAASISMLAIKRANC FHVEGHGDPCNISSTPYMIIFGVAEIFFSQIPDFDQISWLSILAAVMSFTYSTIGLGL GVVQVVANGGVKGSLTGISIGVVTPMDKVWRSLQAFGDIAFAYSYSLILIEIQDTIRA PPPSESRVMRRATVVSVAVTTLFYMLCGCTGYAAFGDAAPGNLLTGFGFYEPFWLLDV ANAAIVVHLVGAYQVYCQPLFAFVEKWAQQRWPKSWYITKDIDVPLSLSGGGGGGGRC YKLNLFRLTWRSAFVVATTVVSMLLPFFNDVVGFLGAVGFWPLTVYFPVEMYIVQKRI PRWSTRWVCLQLLSLACLAITVASAAGSIAGILSDLKVYKPFATTY</aaseq>

Gene Sequence

<dnaseqindica>109..238#320..553#630..723#807..1839#cacgcacagtctctcccaccaacaaacacgtacgactttgaacgcaaagtcttggcgccactcgatcgatcactctctgctcatcaggtgtttgtggaaagtgcagagatgggggagaacggtgtggtggcgagcaagctgtgctacccggcggcggccatggaggtggtcgccgccgagctcggccacacggccggctccaagctgtacgacgacgacggccgcctcaagcgcaccggtaaggatcggagctcgcgcctcgagccaagcttcatccatggaccatggctgtcgttgctgacattgatgtgttgtctagggacgatgtggacggcgagcgcgcacatcatcacggcggtgatcggctccggcgtgctgtcgctggggtgggcgatcgcgcagctgggttgggtggccggccccgccgtcatgctgctcttctcgttcgtcacctactacacctccgcgctgctcgccgactgctaccgctccggcgacgagagcaccggcaagcgcaactacacctacatggacgccgtgaacgccaacctgagtacgtatcattgtcagagacggcctcgtacgcgcccatgtcgtcgtgctcactgtgctggcatttcttcgaacaggtggcatcaaggtccaggtctgcgggttcctgcagtacgccaacatcgtcggcgtcgccatcggctacaccattgccgcctccattagcatgctgtgagtatcgatccgcacgaactctccattgatggtgattcgtggtgagctcatgtcgcgtgtggttggcatggcatgaacagggcgatcaagcgggcgaactgcttccacgtcgaggggcacggcgacccgtgcaacatctcgagcacgccgtacatgatcatcttcggcgtggcggagatcttcttctcgcagatcccggacttcgaccagatctcgtggctgtccatcctcgccgccgtcatgtcgttcacctactccaccatcgggctcggcctcggcgtcgtgcaggtggtggccaacggcggcgtcaaggggagcctcaccgggatcagcatcggcgtggtgacgcccatggacaaggtgtggcggagcctgcaggcgttcggcgacatcgccttcgcctactcctactccctcatcctcatcgagatccaggacaccatccgggcgccgccgccgtcggagtcgagggtgatgcggcgcgccaccgtggtgagcgtcgccgtcaccacgctcttctacatgctctgcggctgcacggggtacgcggcgttcggcgacgccgcgccgggcaacctcctcaccgggttcggcttctacgagcccttctggctcctcgacgttgccaacgccgccatcgtcgtccacctcgtcggcgcctaccaggtctactgccagccgctgttcgccttcgtcgagaagtgggcgcagcagcggtggccgaaatcatggtacatcaccaaggatatcgacgtgccgctctccctctccggcggcggcggcggcggcggaaggtgctacaagctgaacctgttcaggctgacatggaggtcggcgttcgtggtggcgacgacggtggtgtcgatgctgctgccgttcttcaacgacgtggtggggttcctcggcgcggtggggttctggccgctcaccgtctacttcccggtggagatgtacatcgtgcagaagaggataccgaggtggagcacgcggtgggtgtgcctgcagctgctcagcctcgcctgcctcgccatcaccgtcgcctccgccgccggctccatcgccggaatcctctccgacctcaaggtctacaagccgttcgccaccacctactaattcatcgagcacctcgcgtgcatgcacataccgtacgttattacgcgtggtcgagatgaagtacagatgattgtatcctaattaatcaattaatcaaccaaaattaattaactaattactatttagttattattgtcacacgtgtggtgaaaaaaaaagtgaaaagaggaatttgagacaggttgcatagagtgttgtttatgctattgttgcttgtatactgcctgtattaattccaaccgatgctactaattttgattgtttctggtccgtgttaatgttaaccaaaaggaggtagaatggtgtatttccaagtgaagagatgtgtttgtaattacataattaaatgagaaatgcactttcttatggc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0424000, RefSeq:Os05g0424000