Os08g0106900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0106900 |
|---|---|
| Description |
Transposase, IS4 domain containing protein |
| Version |
NM_001067328.1 GI:115474392 GeneID:4344453 |
| Length |
2581 bp |
| Definition |
Oryza sativa Japonica Group Os08g0106900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:334242..336822 |
| Sequence Coding Region |
334242..334751,334839..335168,335600..335973,336059..336284,336373..336822 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:334242..336822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:334242..336822 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccattattattcaatctagaaaaagaaagagatgtgcacggagacaaggtgttaagtatggcccaatggatgaaagggatcgaatgagatttgaatacctagacacaaaaatttggaggaatgatacaacttgtatcgacatgcttagacttagaaaagattctttctttcgattttgtaagctgtttagagatcggggtttgcttgaggataccatccacatgcgtgttgaggagcaggttgctatgtttctaaatacagtgggacacaaccttagaaataggttagttcgcactaattttgataggtccggagaaacagttagtcgttatttcaacaaagtacttcatgctattggtgagctacgagatgaactaatcaggcccccctcattggacaccccaaataaaatagccgggaaccccagatgggatccttactttaaggattgtattggagctattgatggtacacacattagagcctctgtccggaagaatatggagtcttcatttcgtggtaggaagtctcatgccacgcaaaatgtaatggcggccgtagattttgatcttcggttcacttatgtcttggttggttgggaggggacagcacatgatgctgtagttttaagagatgcattggaacgtgaaaatggccttcgtattccacaaggaaaatactacctagttgatgctggatatggagccaaacaaggattccttcctccctttcgtgctgtccggtaccacttgaatgagtgggggaataatccggtgcaaaatgagaaggagttgttcaaccttaggcactcatcccttcgaatcacggttgagcgtgcatttgggtcactaaagagaagattcaaaattcttgatgatgccactccattcttccctttcccaactcaagtagatattgtagcagcttgctgcattattcataattgggtcataaatgatgggattgatgagcttttcataggtccaaatgaaataattgaacccaatgaaacatctattggcgaagcaaatgaacatgcattgatggaaatggatagcaaaggaaagggaggaagcaaccatgcttcatggacatatgcaatgtcctctttcatgttgtctcatctagccaatcttgtggctagtgggacgaggacttcttctggcttcaaacaggcccatctcaacgcatgtgcgagggctctcaatgagatgttttgtactaattttaccggtgatcagattaagaatcacttgaaaacatggcaaaagaagttcacaaagatgaacaggcttaggaaagtgagtgctgctggttgggatgaagttaattttgttattactcttgatgctgagcactacaatgaatatatcaaggatcacaagaccgatgctgagttttttaacaaacctcttctgcactatggtgagatgcttacaatctttgggagcacaatggctacaggaaagtttgcaaaggactcaagttcagttcttggtactgaagatgtagaaactgaaaacgaagaggtgaatcgtgctccaactactattgatcttgatgctgaaacttcatctgcaagcaagccaaagaaggccaaaacatctgaaagtgaagatgatgggttgattagggcaatcaccaatgtgggtgacaagcttgctgctgctatagtgaaggctggtgagccagataatacgctaccggtaggtttatttgacaccctgaaaagccttcctggttttcaggacatccacatatcattttactatgcttatttggtggctaaccctcacattgctagagctttcgatggacttccattcgaaaacaagctacattgggttgctatgttcattagtgacaagtttcctggatcaatgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MAIIIQSRKRKRCARRQGVKYGPMDERDRMRFEYLDTKIWRNDT TCIDMLRLRKDSFFRFCKLFRDRGLLEDTIHMRVEEQVAMFLNTVGHNLRNRLVRTNF DRSGETVSRYFNKVLHAIGELRDELIRPPSLDTPNKIAGNPRWDPYFKDCIGAIDGTH IRASVRKNMESSFRGRKSHATQNVMAAVDFDLRFTYVLVGWEGTAHDAVVLRDALERE NGLRIPQGKYYLVDAGYGAKQGFLPPFRAVRYHLNEWGNNPVQNEKELFNLRHSSLRI TVERAFGSLKRRFKILDDATPFFPFPTQVDIVAACCIIHNWVINDGIDELFIGPNEII EPNETSIGEANEHALMEMDSKGKGGSNHASWTYAMSSFMLSHLANLVASGTRTSSGFK QAHLNACARALNEMFCTNFTGDQIKNHLKTWQKKFTKMNRLRKVSAAGWDEVNFVITL DAEHYNEYIKDHKTDAEFFNKPLLHYGEMLTIFGSTMATGKFAKDSSSVLGTEDVETE NEEVNRAPTTIDLDAETSSASKPKKAKTSESEDDGLIRAITNVGDKLAAAIVKAGEPD NTLPVGLFDTLKSLPGFQDIHISFYYAYLVANPHIARAFDGLPFENKLHWVAMFISDK FPGSM</aaseq> |
| Gene Sequence |
<dnaseqindica>2072..2581#1655..1984#850..1223#539..764#1..450#atggccattattattcaatctagaaaaagaaagagatgtgcacggagacaaggtgttaagtatggcccaatggatgaaagggatcgaatgagatttgaatacctagacacaaaaatttggaggaatgatacaacttgtatcgacatgcttagacttagaaaagattctttctttcgattttgtaagctgtttagagatcggggtttgcttgaggataccatccacatgcgtgttgaggagcaggttgctatgtttctaaatacagtgggacacaaccttagaaataggttagttcgcactaattttgataggtccggagaaacagttagtcgttatttcaacaaagtacttcatgctattggtgagctacgagatgaactaatcaggcccccctcattggacaccccaaataaaatagccgggaaccccagatgggatccttactttaaggtgtggcatttatctatctccttttcagatttttatttccaaatatatatgtggtccctaattatttatggtactgaacacaaattaggattgtattggagctattgatggtacacacattagagcctctgtccggaagaatatggagtcttcatttcgtggtaggaagtctcatgccacgcaaaatgtaatggcggccgtagattttgatcttcggttcacttatgtcttggttggttgggaggggacagcacatgatgctgtagttttaagagatgcattggaacgtgaaaatggccttcgtattccacaaggtaatagatatatttagttccatcaatttgtccatgggaaatgttaaaaggtagaaatttgatcaacttgtccctcatttgataggaaaatactacctagttgatgctggatatggagccaaacaaggattccttcctccctttcgtgctgtccggtaccacttgaatgagtgggggaataatccggtgcaaaatgagaaggagttgttcaaccttaggcactcatcccttcgaatcacggttgagcgtgcatttgggtcactaaagagaagattcaaaattcttgatgatgccactccattcttccctttcccaactcaagtagatattgtagcagcttgctgcattattcataattgggtcataaatgatgggattgatgagcttttcataggtccaaatgaaataattgaacccaatgaaacatctattggcgaagcaaatgaacatgcattgatggttcaattcaggcaagcccttgctgatcaaatgtgggaggaccgtcaaaaccatcgtggacactaatatgtagcagttctgttgtatggacatcttgatttttttgaatttctattgtatgtttaatttctggaccgagtttcacttgtatggacaacttgtttgctgatggtcatttgtatggacttgttggctgatttgtatggacttgtttgctgatggtcatttgaatggatgagctagttggttgaatttaatttgtatggttaaatatgctgttgatggtcatttttcttcactttatgtgtgaatttcatttaaatggacaacttgtttgctgaaaggtatttttatggtcattggtttattatttctgtaccatatcatgcttgctgaacttaattttcatttctaaatattatggcttgtaggaaatggatagcaaaggaaagggaggaagcaaccatgcttcatggacatatgcaatgtcctctttcatgttgtctcatctagccaatcttgtggctagtgggacgaggacttcttctggcttcaaacaggcccatctcaacgcatgtgcgagggctctcaatgagatgttttgtactaattttaccggtgatcagattaagaatcacttgaaaacatggcaaaagaagttcacaaagatgaacaggcttaggaaagtgagtgctgctggttgggatgaagttaattttgttattactcttgatgctgagcactacaatgaatatatcaaggtataaacactcctgttccatgaaaatttctacagacttttcatttttgttgcaagcacttattttgttaaatatgttacatgataggatcacaagaccgatgctgagttttttaacaaacctcttctgcactatggtgagatgcttacaatctttgggagcacaatggctacaggaaagtttgcaaaggactcaagttcagttcttggtactgaagatgtagaaactgaaaacgaagaggtgaatcgtgctccaactactattgatcttgatgctgaaacttcatctgcaagcaagccaaagaaggccaaaacatctgaaagtgaagatgatgggttgattagggcaatcaccaatgtgggtgacaagcttgctgctgctatagtgaaggctggtgagccagataatacgctaccggtaggtttatttgacaccctgaaaagccttcctggttttcaggacatccacatatcattttactatgcttatttggtggctaaccctcacattgctagagctttcgatggacttccattcgaaaacaagctacattgggttgctatgttcattagtgacaagtttcctggatcaatgtag</dnaseqindica> |
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