Os05g0424800

From RiceWiki
Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0424800| Description = Similar to AER274Wp| Version = NM_001062130.1 GI:115463990 GeneID:4338847| Length = 4096 bp| Definition = Oryza sat...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0424800

Description

Similar to AER274Wp

Version

NM_001062130.1 GI:115463990 GeneID:4338847

Length

4096 bp

Definition

Oryza sativa Japonica Group Os05g0424800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20813933..20818028

Sequence Coding Region

20814299..20814444,20814523..20814628,20815331..20815423,20815576..20815713,20815815..20815942
,20816052..20816212,20816333..20816423,20816516..20816572,20817344..20817500

Expression

GEO Profiles:Os05g0424800

Genome Context

<gbrowseImage1> name=NC_008398:20813933..20818028 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20813933..20818028 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggggcgaggctggggagatgggtggaggggatgtcggcggacaacgtcaagggcctcctgctggcgctctcctccagcctcttcatcggcgccagcttcatcgtcaagaagaagggcctcaagaaggccggcgcctccggcgtccgcgcaggtgttggtggctactcttacttgcttgaaccattgtggtgggcaggaatgacagcaatgattgttggagaaatcgccaacttcgcagcttatgcttttgctcctgctatcttggtcactccacttggtgcacttagcataattatcagtgctgttcttgcacacattattctgagagagaagctacacatatttggtatactcgggtgtattctttgtgttgtgggttcgacaagtattgtgcttcatgcccctccagagcgtcaaattgagtctgtggcagaagtatgggatctagctactgaaccagcatttctactatatgcagccattgtgcttgcagcagcttttgtgctcatattccattttgtcccacaatatggtcagacccatatcatggtgtatattggtgtctgttctctcgtgggatccttatcggtcatgagtgtcaaagctcttgggatagcattgaagctgacattttcagggatgaaccagcttgtttatccacagatgtgggtgttcttactttttgtagttgcatgcatagtaacacagatgaactatctgaacaaggcccttgacactttcaacactgcagtggtttcgcccatatattatacgatgtttacatccttgaccattttggccagtgtgataatgttcaaggactgggatcgtcaagatccaacacaaattgtcacggagatgtgcggttttgttacaatcctttctgggacatttcttcttcacaagacaaaggatatggtggatggtctcccaccaaatttacctatccgactacctaaacacgccgaggaggatggttatgctgctgaaggaattcctctcagatctgctgctgatggcattccactcaggtcaccgagggccacggaatcgtttcgtgcgacattataa</cdnaseq>

Protein Sequence

<aaseq>MGGARLGRWVEGMSADNVKGLLLALSSSLFIGASFIVKKKGLKK AGASGVRAGVGGYSYLLEPLWWAGMTAMIVGEIANFAAYAFAPAILVTPLGALSIIIS AVLAHIILREKLHIFGILGCILCVVGSTSIVLHAPPERQIESVAEVWDLATEPAFLLY AAIVLAAAFVLIFHFVPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALKLTFSGMNQ LVYPQMWVFLLFVVACIVTQMNYLNKALDTFNTAVVSPIYYTMFTSLTILASVIMFKD WDRQDPTQIVTEMCGFVTILSGTFLLHKTKDMVDGLPPNLPIRLPKHAEEDGYAAEGI PLRSAADGIPLRSPRATESFRATL</aaseq>

Gene Sequence

<dnaseqindica>3585..3730#3401..3506#2606..2698#2316..2453#2087..2214#1817..1977#1606..1696#1457..1513#529..685#accgtgatctgtgtgactgatctctcacgttgcagccgcggccccgcgcggctcccctccccccaccgaccggcatggcgacacccagaaaaacctccaaaatcaccgcgaaaacaccgcgcgccaccgtgatctgactgactgatctgatctctcacgttctagcggcgcaccgcgcacgcggacccgcacacgcgagagagcgcgcgcgcgcacggcgattcggtcgtcctcctccggtttactactactagtacttgccaccttcccgacgacgtcgccgtcgtcgtcgtcggcgcgcgcgcgcctctctctctctcaaaggagtggactgcgtgctagtgctagtgctacaggctacgggtcgagaaaggcgaggccaccagcagagagcaagctgagggaggagacggggcggcctctccgccttgcagatctcgcatgcgcgggcggagtggacggcggcggaggaggtggcggaggaggagggcgcagtaggggaggcgtacgggcggcggcggcggcggcatgggcggggcgaggctggggagatgggtggaggggatgtcggcggacaacgtcaagggcctcctgctggcgctctcctccagcctcttcatcggcgccagcttcatcgtcaagaagaagggcctcaagaaggccggcgcctccggcgtccgcgcaggtgcgtgacgtgactctcacccacctccacctccgccttccgcttaaccccttctcagctcgcaacccaagcgaatcgcagggatgcccacgctctcctctgctgctgctgctgctgctgccgcggtgctagctctgtagcgtagatctgagccccgcgagatttggatcttgatcgtgttgtcggtggccaagtggtgttagggagtttggtgctgcacgcgcattggagatcgggctgtcggttaagcctgtagttgtttgggtactaagaaatagttgttcttgtaggactagctcagttgatgatgatgttccagcaagatgattaatagagtaatagtacaatagtagcaattgttatagttcatggcgcagtggtgatatcacgatgtgcaatatcccctcttgtttataatgtgactgcattgcgattcgttatctatggtttctgcgtcaaaattagcagtttgaacaagcttacacaaacatggaaggctgtagaatatgaaaatctttgacggtaggaggagcctatgattgcagaaatggttgcaagcagaaaaaaaaaactactatgtgattgctgttgctctatttgttgcctttttgtgctttaaacttccatggatgatcaatccgcgttgtgtaattggtctcccatgatatgttggttagtcacggaagtaccatatagggaattttgctaccctctggccaaatgggtttcagctttttcagtaattatgcttatgttgttgacttgctacaggtgttggtggctactcttacttgcttgaaccattgtggtgggcaggaatgacagcaagtaagtggtttcttcatgcatgaatatactggttgacaaagttcttccatctgtggtgatagtgctaattgatgtactatgctttttgtcagtgattgttggagaaatcgccaacttcgcagcttatgcttttgctcctgctatcttggtcactccacttggtgcacttagcataattatcaggtaagactagaattgtatgactgaagtggtatggtaaaatcttcttctgtgcatattcctgtaaatcttcttctgtgtatattcctgtaaatctgataatatcggcatcccttcttacagtgctgttcttgcacacattattctgagagagaagctacacatatttggtatactcgggtgtattctttgtgttgtgggttcgacaagtattgtgcttcatgcccctccagagcgtcaaattgagtctgtggcagaagtatgggatctagctactgaaccaggtataatcctaccatgtacacaagataataatataacaaatattagaaaatagtgactcatttagacattggtttttcaagtactaatatttaaacctttatgttccagcatttctactatatgcagccattgtgcttgcagcagcttttgtgctcatattccattttgtcccacaatatggtcagacccatatcatggtgtatattggtgtctgttctctcgtgggatccttatcggtatgcatgtcattaataattcttgatacgttttcacaatatccttcttagtcggtttacggtgtaaatgaattcattctgtaaacttctttctctggcaggtcatgagtgtcaaagctcttgggatagcattgaagctgacattttcagggatgaaccagcttgtttatccacagatgtgggtgttcttactttttgtagttgcatgcatagtaacacagatgaactatctgaacaaggtatgatcaatatctatgttgtaggataattttgggcatgccaagagaaaaaaataaacgatgaatagactgattttgtttttctatatggaagtcttgtacatttgtcttctactctatacgactttgaatttgactgtttacttttgcaggcccttgacactttcaacactgcagtggtttcgcccatatattatacgatgtttacatccttgaccattttggccagtgtgataatgttcaaggtaacaggttttgggcttaatttatttgttgacataattttaatacaaacaccatgtagctgccttcttaaaaggtgatggcgacactataaactattgtactgattttgtttaatatggcaatatgtcaatataccagaagtatacttaattctttttaatgaatttgctgcttgaatggaaatcaatcttttatacattgtgtatcgatagcgcagtttggcatatcaaattaactcttgacttatccttctggactattttcaaaaacatgttgggacctttggcattcagtttttgaccatggccattgaactttttgttccatcttcctagatgactacccatcatgtttccttgctgcatcaactgccgccttaatgtgatactgtagctgtttgatattcaattacacttaaatatcctgattgatgttcaaactcctcttatatggggcccatatatctaaaaatgttctctaatctgaataggacatgtaggcctgtcagtatacatgtaaacataacattaacattgaaaggcctttcatactacaatgaatttctgaatcatgataatgctataaattctatcggcaaactgtatcatcagaatggcgcatcatggttcagtcaaccccttattgtgttccattgacaatgcttctgaactatctgttgatgcaaccctgattgcatgcaggactgggatcgtcaagatccaacacaaattgtcacggagatgtgcggttttgttacaatcctttctgggacatttcttcttcacaagacaaaggatatggtggatggtatgactgcctttcgtcccatcttgtgttgacttgaaatagcacccattggtaaattcttattcattgccatcgcaggtctcccaccaaatttacctatccgactacctaaacacgccgaggaggatggttatgctgctgaaggaattcctctcagatctgctgctgatggcattccactcaggtcaccgagggccacggaatcgtttcgtgcgacattataacctgctaatgcttgcaaccgtgcttcaaggtttatactccagcagcaacgctagctcctcaatgtgggaagggaagaatctccattctttcattggatacacactccataggttgactgtaggatccaaaggtaacggctcggccccccctgtaattttttcagacatccgtacaaaattttgggggtcattacatcagttattatacatatcttcgggtgagataaccaggatggccaagaatcccaagttctgaactgtaaatcgctgtgagccatagaggtcattggtctggaactgttgtattctttcaaatacaataggcaaatagctcactcataatacaagaagaggttgaaagagcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0424800, RefSeq:Os05g0424800