Os05g0425700

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0425700| Description = Similar to F-box protein AtFBL5| Version = NM_001062133.1 GI:115463996 GeneID:4338850| Length = 3904 bp| Definition...")
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Gene Name

Os05g0425700

Description

Similar to F-box protein AtFBL5

Version

NM_001062133.1 GI:115463996 GeneID:4338850

Length

3904 bp

Definition

Oryza sativa Japonica Group Os05g0425700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20853984..20857887

Sequence Coding Region

20855311..20855570,20856314..20856662,20856737..20856878,20857171..20857550

Expression

GEO Profiles:Os05g0425700

Genome Context

<gbrowseImage1> name=NC_008398:20853984..20857887 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20853984..20857887 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttagtgggaggtcagcaaatggggaattggatgcatgcttcagaagcctcatgctttcgatcagcagcgggagggggcaggctgaaggtggtggtgcaatgccaaccttgtcaggctggaaggaccttcctattgagctgcttctgcggatcatgtcgataattggagatgaccggatgcttgtcgtggcatccggtgtttgcactggctggcgcgacgcgctgggatgggggcttactaatctttccctctcacggtgccagcagaacatgaataacttaatgatatcacttgctcacaagttcacgaagcttcaagttctcactcttcgccagaacatacctcagcttgaagacagtgcagtagaggccgtttccaactactgtcatgatctacgtgagttagaccttagcagaagttttaggcttagtgaccgttccttgtatgcattagcccgtggctgtcctcagcttacaaaattaaacattagtggatgttccaacttcagtgacactgccttgacctatcttactttccactgtaaaaattttaagtgcttgaatctatgtggttgtgggaaggcagcaaccgacagagctttgcaggccatagcccgtaattgcggccagctgcaatcattgaacttaggttggtgtgaggatgtcacagataagggagtgaccagcttggcatcagggtgtcctgatctcagggctctggacttgtgtggttgtgttcttataacagatgagagtgtgatcgctcttgccactgggtgtccacacctgcgatctttaggcttgtactactgccagaacatcaccgaccgagccatgtactccctcgcaaacagccgggtcaagagcaaacgcaggaggtgggacagtgtgaggagcagcagctctaaggaagaagacggtctcgcaaacctgaacatcagccagtgcacggccctgacacccccagcggtccaggcggtctgcgactccttcccggccctccacacttgccctgggaggcactccctgatcatcagtggctgcctcagcctgacgtctgtccactgcgcctgcgccctccacccgcaccgtgctggaagaaccatggtgcctagccacgcatactga</cdnaseq>

Protein Sequence

<aaseq>MVSGRSANGELDACFRSLMLSISSGRGQAEGGGAMPTLSGWKDL PIELLLRIMSIIGDDRMLVVASGVCTGWRDALGWGLTNLSLSRCQQNMNNLMISLAHK FTKLQVLTLRQNIPQLEDSAVEAVSNYCHDLRELDLSRSFRLSDRSLYALARGCPQLT KLNISGCSNFSDTALTYLTFHCKNFKCLNLCGCGKAATDRALQAIARNCGQLQSLNLG WCEDVTDKGVTSLASGCPDLRALDLCGCVLITDESVIALATGCPHLRSLGLYYCQNIT DRAMYSLANSRVKSKRRRWDSVRSSSSKEEDGLANLNISQCTALTPPAVQAVCDSFPA LHTCPGRHSLIISGCLSLTSVHCACALHPHRAGRTMVPSHAY</aaseq>

Gene Sequence

<dnaseqindica>1328..1587#2331..2679#2754..2895#3188..3567#ctctatccacatcccgcgccacgccccaggacgagcggaaaaaaagatttcgcccccatccgccgggcactcgcgcctcgcgagccgcgtccacctccgcgcgggcgccacgccacgccacgcccacccaaacagcttcgctcgccttcctcctctcggccctcgccgcgtccacccccccccgatcgagccgccctccccctccgcctcccgcctccgcgcgcgtttaggagggggtcgggaggcccgaagctgggccggcgtctccgccccgcagggtccgggaaggagagatagggagaagggtcctcggctcctcgcgccgcgtgctttggactgggtgagttgattgttctggtcttttttttttttggaggggattttcccctttttgttttgctgaatatttttccgcgaggatggattcattccttgtgtgggggatgaattggaggagctggctaagctttgatttacctatgcaagtctggaactcggtttctttcttgggctgtttttccgagggagcctcttggtctccgattattccctagattttcggctttcatttcgattgctccgcgattttggagccttttccccatggcttttcgcggattatcctctcgaggcctcgattcctgctattgggtcctggaactggagacataggtgaacaattgaagctttaattaatcaccaaatttccctatgtgtttcagcgcttttctaagctccgccatcttggacctagaaagatgccattgacgcagttttcgttcttgttcatgatttctctcagttgcctctctggtgttcccttccatcctctttcttgagaaaaatctatgccatgttgctattagtaggtgctttatgcttaggagtagtacaacttccctccgatccgaaggctcattcaggttcttgtatgcgcgctgcataagcaaaatcagagggtccagcacatctcgtttcgttttgtaagccctgaatctgtagcgtgcttcgattttttttcagtggtctgtgctgtttcaagtttctccttgcacgactgtacgttatgtaatttagttatgtgcttttccaaaaaatttgctccacagaaatagcctatgcttgtgcatttctattatgagtttatgaccttccagagttggtggtgcctgtatagttgtatggtctctaataactgatgctatcattacctctcgcaggtccgtaaataggccggtcgttggatagcttatctaggcttatctaatttgctgattacttgtcgggcaattgcaggagtagctggtgctagaagtaatttttggaaatggttagtgggaggtcagcaaatggggaattggatgcatgcttcagaagcctcatgctttcgatcagcagcgggagggggcaggctgaaggtggtggtgcaatgccaaccttgtcaggctggaaggaccttcctattgagctgcttctgcggatcatgtcgataattggagatgaccggatgcttgtcgtggcatccggtgtttgcactggctggcgcgacgcgctgggatgggggcttactaatctttccctctcacggtgagcaaggtttttatccttcagtgttgttctttcaatcgatggttattgtctgattggtgtgacttgtgtggtggcgttaacttttcgtgacataacgtctatacgctgttggtgtaatggtgggaagatttggattagctttgatcattgaaaatattggatatggcactaccactagaatatattccaagtgtcttagaacacacattcctatgcatcattattcaaccatgtcgtactattagaaaagtagaaaagcccatgtgcttagagcgttagatttgggtctgtgactgctgtaggtttttctgcaaccctatgcagtttcatgtacgcatcttattttaccacttatattgtctgaaggcctgaaaatcctaagaacagacttttcttttcatttgaactgatgtccaaagcaaatccagcatatatgctatagttaatataacccttaactattaaaaaactaacatgagatggccagggcaacatgcttcacctacttgaatggagactagtcactatttctgcttagggacactaagccactgacaagtgctttctatttgtattctcattcttagattaattaacatgtctctttgatgattcccatcatggagtacatgctactagtagtatttcaatctttgcaagcatattttcaaatggtattttctttgcatttccaagtttttagtatctgttagttgacctgaaaattataccatctgcaggtgccagcagaacatgaataacttaatgatatcacttgctcacaagttcacgaagcttcaagttctcactcttcgccagaacatacctcagcttgaagacagtgcagtagaggccgtttccaactactgtcatgatctacgtgagttagaccttagcagaagttttaggcttagtgaccgttccttgtatgcattagcccgtggctgtcctcagcttacaaaattaaacattagtggatgttccaacttcagtgacactgccttgacctatcttactttccactgtaaaaattttaagtgcttgaatctatgtggttgtgggaaggcagcaaccgacagagctttgcaggtactccctgttaacccattattttgataacatgtttgatgaacttccattgagtttctgtgatcttgatgcaggccatagcccgtaattgcggccagctgcaatcattgaacttaggttggtgtgaggatgtcacagataagggagtgaccagcttggcatcagggtgtcctgatctcagggctctggacttgtgtggttgtgttcttataacaggtaatttgcagtatttgtatatctatttttttgtgacctttttctcttcattcattgacgaaaagaaataagatgtcagtttgagtgctagtcatatagattactatagtattatattagtttatcaggcacctggcttctttgtactattaaaacaaagttacttttacgagggttgggacttccatagttcaattgtagcttctagcaatcatgggcatccttttttagataagaaagattaattacatccccggtctcagcaatttaatcctgttcaatcatattgcagatgagagtgtgatcgctcttgccactgggtgtccacacctgcgatctttaggcttgtactactgccagaacatcaccgaccgagccatgtactccctcgcaaacagccgggtcaagagcaaacgcaggaggtgggacagtgtgaggagcagcagctctaaggaagaagacggtctcgcaaacctgaacatcagccagtgcacggccctgacacccccagcggtccaggcggtctgcgactccttcccggccctccacacttgccctgggaggcactccctgatcatcagtggctgcctcagcctgacgtctgtccactgcgcctgcgccctccacccgcaccgtgctggaagaaccatggtgcctagccacgcatactgatggtgttttgggcgcttggtcctggtgaatgccctattgcctggtggatgatgaggtgttccttcctggcctagaggaagaagctgtgtgaataaactcagaactcaaataatgtacagtaggactctatatctgtaggaatgataaccatggagtggagaatggctggagagttgcgtctcccctgccattcaggccactgactgcaaactactacaaagatgtgtgtgtgtgtgctatgtagcggacttctattaagtggcttgtctatttgtgacttgtgagcaggggattcaatgttttgccactctctagaccggagatttgatgatttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0425700, RefSeq:Os05g0425700