Os09g0546100

From RiceWiki
Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0546100| Description = Auxin responsive SAUR protein family protein| Version = NM_001070374.2 GI:297609903 GeneID:4347758| Length = 670 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os09g0546100

Description

Auxin responsive SAUR protein family protein

Version

NM_001070374.2 GI:297609903 GeneID:4347758

Length

670 bp

Definition

Oryza sativa Japonica Group Os09g0546100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22417755..22418424

Sequence Coding Region

22417847..22418272

Expression

GEO Profiles:Os09g0546100

Genome Context

<gbrowseImage1> name=NC_008402:22417755..22418424 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22417755..22418424 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcagtgccaggagacttgctcaactggccaagaagtggcagaggatggcggcacttgaaaggaagaggctcacaatgaaagccaaagaaaatgaagagtgctgcacatctgtagcaggcaagggccactgtgtcatgtacacagcggacgggagccgattcgaggtcccgttggcgtacctcggcactgcagtcttcagtgagctcctcaggatgtcacaggaggagtttggtttcacgagcgatggcaggatcatgttgccttgtgatgctgtggtaatggagtatgccatgtgcttgctcaagagaaatgcttcagctgaggtggagaaagcattgctgagctccatggtggcaccttgccactacaccggttgtatggtgccaaccgttggagtcaaccagcatatttcttgcttgtag</cdnaseq>

Protein Sequence

<aaseq>MISARRLAQLAKKWQRMAALERKRLTMKAKENEECCTSVAGKGH CVMYTADGSRFEVPLAYLGTAVFSELLRMSQEEFGFTSDGRIMLPCDAVVMEYAMCLL KRNASAEVEKALLSSMVAPCHYTGCMVPTVGVNQHISCL</aaseq>

Gene Sequence

<dnaseqindica>93..518#tcacatttcatcaactcatccacaaagcgggcatcgcacttcatagtacatctcatcagatttccagctgaaaccaagatcaacaatcaaccatgatcagtgccaggagacttgctcaactggccaagaagtggcagaggatggcggcacttgaaaggaagaggctcacaatgaaagccaaagaaaatgaagagtgctgcacatctgtagcaggcaagggccactgtgtcatgtacacagcggacgggagccgattcgaggtcccgttggcgtacctcggcactgcagtcttcagtgagctcctcaggatgtcacaggaggagtttggtttcacgagcgatggcaggatcatgttgccttgtgatgctgtggtaatggagtatgccatgtgcttgctcaagagaaatgcttcagctgaggtggagaaagcattgctgagctccatggtggcaccttgccactacaccggttgtatggtgccaaccgttggagtcaaccagcatatttcttgcttgtagtttcctgaagaagagccaagtcttctcctgtagttctattatatctgtattatacctggatcagtttagaacagttagatgtaggtaatagaaagaggaaaattgccatgtaagcctttcaatattgcaagcaatcaaagaaaacgtccagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0546100, RefSeq:Os09g0546100