Os05g0427300

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0427300| Description = Similar to RNA binding protein (Fragment)| Version = NM_001062142.1 GI:115464014 GeneID:4338860| Length = 3728 bp| ...")
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Gene Name

Os05g0427300

Description

Similar to RNA binding protein (Fragment)

Version

NM_001062142.1 GI:115464014 GeneID:4338860

Length

3728 bp

Definition

Oryza sativa Japonica Group Os05g0427300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:20954410..20958137

Sequence Coding Region

20955533..20955663,20955748..20955934,20956151..20956362,20957917..20957950

Expression

GEO Profiles:Os05g0427300

Genome Context

<gbrowseImage1> name=NC_008398:20954410..20958137 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:20954410..20958137 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaggaatccgggctgcaccgtcttcataggtaacttggatgaaaaggtacctgagagggtcttgtatgagattcttattcaggtaggtcgtgttgtagacctacacataccacgtgacaaggaaactaatcgctccaaaggttatgcttttgctgagtatgaaacagaggagattgcccagtatgctgttaagctattttctggccttgttcgtcttcataatagaacacttagatttgcgatttctggacaagacaagcaatcttctaatggaaatattcctgtaacacctaaagtgaaccctataccgccaccaaagccggctcagctaatgagatctagtgatactcccgcatcgcaacatacagtggtaaatggcaggattgctggtatttctccaaaccattcttatagtgcgcactctgaggcaccaagtgggatatcgagtagaggattaagcaatggtacatacgaatatagtagacgcgtatttggttctgttctgaatgacgttagccgtcgtactgacaggcaaccaattccatacccgtcctactag</cdnaseq>

Protein Sequence

<aaseq>MSRNPGCTVFIGNLDEKVPERVLYEILIQVGRVVDLHIPRDKET NRSKGYAFAEYETEEIAQYAVKLFSGLVRLHNRTLRFAISGQDKQSSNGNIPVTPKVN PIPPPKPAQLMRSSDTPASQHTVVNGRIAGISPNHSYSAHSEAPSGISSRGLSNGTYE YSRRVFGSVLNDVSRRTDRQPIPYPSY</aaseq>

Gene Sequence

<dnaseqindica>2475..2605#2204..2390#1776..1987#188..221#gtgagctgattgccaacgaattccccgtgcgccgtgcgcctcgccctcccctccctccctcctcgtgccgttgccccccggttggactcggcgcgcttgcttctcgctcgcggctgctcgtaacctcgcctcgcctcgccctcctgcagcacgcgcggctggctgcccgacccagatccggagcgccatgtcgaggaatccgggctgcaccgtcttcataggtgagatgagatctccccttcccttcccgcctacgggtcctagctctcgctggttcatccggggctttccccccccaattcccccaattctctgtggctggctgctgggctggttcgcgggattttggtgggggggattcgtggtgattttggcgtggccggctcgtaatttcggcgggtttgtgtttgcctgagttctgattgattggtcgctgctgcgtcgtccccaaatcgggattgcttttcccccgcggcgggatacgttgtttcctgtcgattcgatttgattagcaaccgggtttgtattgcatatctcatgctgtttgtgctccgtggatagatgtagtacctgttgctgttcggtacgggcgattagacgagttatgcagcgaaattagctagactagtacaaagttgcaaaggtagaggtagggtttcgagttatcaccacatacactagattgatgattgcgtggttgaggtgttattaagcaggatactgtgcccccgttagcattaggatttaaaccgtagatttattttgtatttgccctcatatttagcctagcacgtccattgcttcatcttgtataggctctgatttctttctgctagcgctttaattgcttgtgcttgtatatattctcctagagtaggaacagtactctttcgtgttcatattcttttgttaactaacaacacgatctccacttgcccaaataccatttcgagatgtcacttgtcccctgctatttatgcataactagtggatcttcccatgcaattttgtacgagctagacaataaaggaagtatttgatatgcatctctcttctctttccttgattacaattatatttttgtattcaactattttgcttatgttttcataagttcgttcagtattttgtatagaactatgaatcaatcaacaccattctactttggatccaccacggtttaacgatatatttcttctagagcaaacctggtggcttcttttcaagctatcttatattagagattggcagagtggcagctgggaactttttaaatatggatgtagtaaaattaagcattcaatggatcatattggacatatgtttatagaaatccattaggctgaattctaacttggtaatacatcccaactaggggttcagatttggagaagtttttatttgtgcttgtcgtatcattatgaactcagttacttaaggtgttataatccttacgttcaagtaaggaatatcagaaaaatcctttgcaagtcatcctccatcgccatgttctttgattgcatcatgtgtgttcttggcttgtcagtttcttaatttggtagtatagctgatttattgtcttttcaccagcattatgtgcaccttcatctttatttgatgcttgtcagatgcagatctgtggcatggctaactgtgttatcgttcgctggtgttgatatttcacaatgattgttcttatgctactttgtctcttgtttttgtcttcagctacaataagctgtataatttcgctaactcttatttttcttaaataggtaacttggatgaaaaggtacctgagagggtcttgtatgagattcttattcaggtaggtcgtgttgtagacctacacataccacgtgacaaggaaactaatcgctccaaaggttatgcttttgctgagtatgaaacagaggagattgcccagtatgctgttaagctattttctggccttgttcgtcttcataatagaacacttagatttgcggtgcgtttctttatgccctctatttatataacttatttttgtgtaacagaatcatgttctgttgttcttataatttggtttgttactgttaataacttaataatatgcactatatgatactatatttgaatggttggctaagtttttgcttgacctattatggttgactagttgtgaagtgattccggctgagcgctttattcctattttcttcagatttctggacaagacaagcaatcttctaatggaaatattcctgtaacacctaaagtgaaccctataccgccaccaaagccggctcagctaatgagatctagtgatactcccgcatcgcaacatacagtggtaaatggcaggattgctggtatttctccaaaccattcttatagtgcgcactctgagggtgagagagtttccttattcctttcaaaatataagacactgtatggtttttaattaaatcttacaattcccttttcttgtccagcaccaagtgggatatcgagtagaggattaagcaatggtacatacgaatatagtagacgcgtatttggttctgttctgaatgacgttagccgtcgtactgacaggcaaccaattccatacccgtcctactagcatattgagctccagggaagaacatggtatgctaacagattagcccagcgatgtcaatgttcgttgtctcagcccttctgtaatatcatctatgtattcaccattacatgcatgtaaatatgtcttatggcttagtcgtgtaggccgatgcttatcttttccattgttctgttctcaacattgtagtcagacttgtgcccgctggttatctcccatgtcatgtcctagtgatagcatcatgcctccactaatgcagctgtaccaagacttagtctaattgcagggatggctggcaatttgtgttttaatatttaatctagtgatgtttgttgttgcttctgtgttccagtgggaccaagtttgtgcttgagttcttggtgtattttgttcttctcgtcaaagttggtttgtattatgttgggcatcacaaaagataatgtcattgtctactatttaaaaaacagtgcaaatctactgaaatttaatgtttatttatgaatatgaaagatgttttagatgacttgttcgtcttgagcaatatttttatggaagtcacaggcattcatatgcatcatcactctggatccagcattggccgcctctggctctggagtgatggagacgtgcatttcctattgcttgagtgctcagctgcaacatcaatcttctggtatgcctacttgctcatcttgctgtgagtccaaggatgccattgatgccaaattattcagttggaaatattgctgtgagtccaaggatgccattgatgccaaattattcagttggaaatatttataatgtcgaacaacaattcaagatggactttgcctgtcatgcaagcttgctacttgtttttttgaccctgtgtgcagtcagtttgtgaagaaccctactgaaggtgggtaattttgatgcggaagatagtgcgacttctgagctgcaccgcctgcacagatcttaggtgagctactgtttaaattgtggagtttgtaagcatcaggcggtttatcttgtgaagttttgcttcatagactcgacatccaggattcaggaacgataagaattgaacctttccttcctgctttctcagatcgtcttttttcataattagcttcttccaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0427300, RefSeq:Os05g0427300