Os05g0428400

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0428400| Description = UspA domain containing protein| Version = NM_001062147.1 GI:115464024 GeneID:4338865| Length = 2545 bp| Definition ...")
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Gene Name

Os05g0428400

Description

UspA domain containing protein

Version

NM_001062147.1 GI:115464024 GeneID:4338865

Length

2545 bp

Definition

Oryza sativa Japonica Group Os05g0428400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21013844..21016388

Sequence Coding Region

21013844..21013991,21014760..21014878,21015978..21016388

Expression

GEO Profiles:Os05g0428400

Genome Context

<gbrowseImage1> name=NC_008398:21013844..21016388 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21013844..21016388 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcagcggtggcagcagcgagcacttcctgcgccagttcagcgcgagcgacggcgcaccgctgccgcgtgagctgggcgaggagtgggcggcggccgagtgcggcaggagggggtcgaggcggtggtccaggaagaaggcgagggggcaccaccgccgcggcgggggcggaggcggcggcggcgggctctgcaggagcagggaggaggcccccgcggggaggaagcgggtgatggtggtggtggaccagagctccggtgccaagcacgccatgatgtgggcgctcacccacgtcgccagcaagggggacttcctcaccctgctccacgtcctcccccacggcggcggcgacgcctccgcgctcgccaactccctcggctcactctgcaaggcctgcaagcccgaggtggaggttgaggcgcttgtgatccaagggcccaagctgggcaccgtcctcagccaggtgaagaagctggatgcatctgtgctggtgctgagccaatgcaagccatctcctttctgctgcttcatgaggagcagcggcgaggagttcgtggaggagtgcatcaacagggcggactgcctgacgctggcggtgaggcggcagagcaagggcgtcggcggctacctcatcagcacccggtggcagaagaacttctggctgctggcttga</cdnaseq>

Protein Sequence

<aaseq>MGSSGGSSEHFLRQFSASDGAPLPRELGEEWAAAECGRRGSRRW SRKKARGHHRRGGGGGGGGGLCRSREEAPAGRKRVMVVVDQSSGAKHAMMWALTHVAS KGDFLTLLHVLPHGGGDASALANSLGSLCKACKPEVEVEALVIQGPKLGTVLSQVKKL DASVLVLSQCKPSPFCCFMRSSGEEFVEECINRADCLTLAVRRQSKGVGGYLISTRWQ KNFWLLA</aaseq>

Gene Sequence

<dnaseqindica>2398..2545#1511..1629#1..411#atggggagcagcggtggcagcagcgagcacttcctgcgccagttcagcgcgagcgacggcgcaccgctgccgcgtgagctgggcgaggagtgggcggcggccgagtgcggcaggagggggtcgaggcggtggtccaggaagaaggcgagggggcaccaccgccgcggcgggggcggaggcggcggcggcgggctctgcaggagcagggaggaggcccccgcggggaggaagcgggtgatggtggtggtggaccagagctccggtgccaagcacgccatgatgtgggcgctcacccacgtcgccagcaagggggacttcctcaccctgctccacgtcctcccccacggcggcggcgacgcctccgcgctcgccaactccctcggctcactctgcaaggcctgcaagcccgaggtgcgtgcttaaagctacccagctttctaatcatgcaagcccaaatattaattttttttaggaatgagcacttcaatttctagtgtttttggttcattgatcgtgtagaactgcactgtttttttttcaacttatgaattgcacaatgtgatatgtttcttgttctcctatacttgtcattctgacttctgaggtggcacactgtgcttatcattttgaacttgagtgacacactgaggttgccattctgagcttgtcactcacttaatataattacggcgaggtgctttacatttttgcattccgagcttataagtggcagactacagtaaagggcgttctagtttgctcaggaacatataagtcatacagtgtatgaactatgaatggcaaaagtttggtttaattgacactgtaacaagtgaactggttgtaggttatggttctcctcgctttcaagaaagtactctgttgttctcattaagcatatattaagagaacttcggttgttttttgttgctctttttcacatgtgcatttggttcttgggcaacctggagccaagagttatgcaaggtagatggagtagatcagatcagaacattcatggaaaaagaatcatagccaacttttcattgatggatcatggcagacttaaagctaaagcctaaaaggcctcaacttcataaaagcaagataaagaaaaaatcgtggggctcccatctagatgctctcataaccatagtcaaattctcaaaaatttgatggcctttaaggactgcaccaaaagttgttcagaagcatttcaaaagggttttaatgcaaaatccgtgtccttttctggggctaaaatgtaaagaactcaacatttgtgaccttgtaaccctgttgcacgaataaaaaaaccagcatcccagtgtacttcacatctccattttttttattcgtgaatgtacttgtctttgttttgtttagcagaggatgcatgcactgttcctcgtctttttgcccgtgaaaacggagggctcatccatcacggttatctcacattctcactgtactctgcaatgtttacaaagctggtttggatgaatgttaggtggaggttgaggcgcttgtgatccaagggcccaagctgggcaccgtcctcagccaggtgaagaagctggatgcatctgtgctggtgctgagccaatgcaagccatctcctttctgctggtaaagcttgtactactacatctaagcatatgcatgcatgcatcacaatccctcatctatgcccacagaatagtagttctgcacaaaggtgaaagagagagaatctttacatagctggcacagtagcacagcccatcgcactgtcaagtcccttgtttctttataagcaaaatgttagtactttaatagctggtcatgtctgaaggttcctcagagtaatattttaacagcttaagttgtgtttctaaaatgtacaaatataggatcacactatttggtatagtcaggaaattttgggaagaaactttatcagtaagtaggccaggaatggggtcactgccttttgtgtgaaaactcatcaacagcaagagccatgtgccaataccatccttaaatcacagatgcctttcgtagtagtcaaagatgtccttccaggcagcttaaactctcctaaatgaatcaagcagcaagaaccatgataatagtactgtgtggtagtgtatcactgaggccctgaccactgcttgagttgctgctgctgtcgtactactatgtagtagtagtagacatctgaagttttaaaaactccacgaaaacctttcaaagttactctgaaaagtgaaaagtttctcagggaaagttaccttttcaccaagtgcaaatgaactcaaaactggccacgcagccacgctgtgtgcacctgctatagtccttgttgagattaaagaaaattttctgttgtttgttccctgtgtgcttgaaatgcagcttcatgaggagcagcggcgaggagttcgtggaggagtgcatcaacagggcggactgcctgacgctggcggtgaggcggcagagcaagggcgtcggcggctacctcatcagcacccggtggcagaagaacttctggctgctggcttga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0428400, RefSeq:Os05g0428400