Os05g0428600

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0428600| Description = Similar to HSP70 precursor| Version = NM_001062148.1 GI:115464026 GeneID:4338866| Length = 2273 bp| Definition = Or...")
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Gene Name

Os05g0428600

Description

Similar to HSP70 precursor

Version

NM_001062148.1 GI:115464026 GeneID:4338866

Length

2273 bp

Definition

Oryza sativa Japonica Group Os05g0428600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21040579..21042851

Sequence Coding Region

21040755..21042818

Expression

GEO Profiles:Os05g0428600

Genome Context

<gbrowseImage1> name=NC_008398:21040579..21042851 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21040579..21042851 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggccgcggcgcgcttcgacggcaacgacaatgcagctggggcttctcctcgccgcgcttctcctcttcacgtcgtcgctggccggctctgtggcggcggccgcaccgccgccgccggcgggggccaagggtggtggtgccaagagcggcggcggcggcggcaccgtgatcgggatcgacctcggcacgacgtactcgtgcgtcggcgtctaccggaacgaccgtgtcgagatcatcgccaacgaccaggggaaccggatcacgccctcgtgggtcgccttcaccgacggcggcgagcggctcatcggcgaggcagccaagaaccaggcggcggccaacccggagcggaccatctacgacgccaagcggctcatcggccggcagttctccgacgccgaggtgcagcgcgacatgaagctgctgccgttcgccgtcgtcgaccggaacggcaagccgcacgtgcgcgtcgaggtgaaggacggcgacgtgcgcgtgttcagcccggaggaggtgagcgccatggtgctcacccggatgaaggagacggccgaggcctacctcggcgagaaggtcacgcgcgccgtcgtcaccgtcccggcctacttcaacgacgcgcagcggcaggccaccaaggacgccggcgtcatcgccgggctcaccgtcgaccgcatcatcaacgagccgaccgccgccgccatcgcctacggcatcgacaagaagggcgcggagaagaacgtcctcgtcttcgacctcggcggcggcacgttcgacgtcagcatcctcgccatcgacaacggcgtgttcgaggtccttgccaccaacggcgacacccacctcggcggcgaggacttcgaccaacgcctcatggaccacttcgtcaaggtcatccgccggaagcacgggcgcgacatcgccggcgacgcgcgcgcgctgggcaagctccgccgcgagtgcgagcgcgccaagcgcgcgctcagcaaccagcaccaggtgcgcgtcgagatcgagtccctgttcgacggcgtcgacttctcggagccgctctcccgggcgcggttcgaggagctcaacggcgacctcttcaagaagacgatggtgccggtgaggaaggccatggcggacgccgggctgggcaagggcgacatcgacgagatcgtcctcgtcggcggcagcaccaggatccccaaggtgcagcagctgctcaaggactacttcggtggcaaggagcccaaccgcggcgtcaaccccgacgaggccgtggcgtacggcgccgccgtgcaggccagcatcatcagcggccacgtcgacgagaacacggagagcatgatcctcctcgacgtcgcgccgctcaccctcggcctggagacggccggcggcgtgatgaccaagctgatcccgcgcaacacggtggtgccgacgaagaagacgcaggtgttcaccacgtacaaggacaggcagacgacggtgaccatccaggtgttcgagggcgagcggagcatgacgagggacaaccggctgctcggcaagttcgacctcaccggcatcgcgccggcgccgaggggggcgccgcagatcgcggtgacgttcgaggtggacgccaacggcatcctcagcgtgctggccgccgacaaggccaccggcaggtcggagaagatcaccatctccggcgacgaccgcaagatcagccaggaggagatcgaccggatggtgcgcgaggcggaggagttcgccgacgaggaccgccggcacagggagcaggtggacgcccggaacagcctggaggcgtacgtctacaacgtcaagagcacgctcggcggcaagatggcggacgccatggagggggaggagaaggagaaggtggaggaggcggtgagggaggcgcacgagtggctggacggcaacccggacgccggcaaggaggagtacgaggagaagctgcgggagctggaggacgtgtgcaaccccgtcatgtcggcggtgtaccagaggtccggcggcggcggcggcgcaccggaagatggcaacgtcgacgacgaggatgaccacgatgagctttag</cdnaseq>

Protein Sequence

<aaseq>MARPRRASTATTMQLGLLLAALLLFTSSLAGSVAAAAPPPPAGA KGGGAKSGGGGGTVIGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGER LIGEAAKNQAAANPERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEV KDGDVRVFSPEEVSAMVLTRMKETAEAYLGEKVTRAVVTVPAYFNDAQRQATKDAGVI AGLTVDRIINEPTAAAIAYGIDKKGAEKNVLVFDLGGGTFDVSILAIDNGVFEVLATN GDTHLGGEDFDQRLMDHFVKVIRRKHGRDIAGDARALGKLRRECERAKRALSNQHQVR VEIESLFDGVDFSEPLSRARFEELNGDLFKKTMVPVRKAMADAGLGKGDIDEIVLVGG STRIPKVQQLLKDYFGGKEPNRGVNPDEAVAYGAAVQASIISGHVDENTESMILLDVA PLTLGLETAGGVMTKLIPRNTVVPTKKTQVFTTYKDRQTTVTIQVFEGERSMTRDNRL LGKFDLTGIAPAPRGAPQIAVTFEVDANGILSVLAADKATGRSEKITISGDDRKISQE EIDRMVREAEEFADEDRRHREQVDARNSLEAYVYNVKSTLGGKMADAMEGEEKEKVEE AVREAHEWLDGNPDAGKEEYEEKLRELEDVCNPVMSAVYQRSGGGGGAPEDGNVDDED DHDEL</aaseq>

Gene Sequence

<dnaseqindica>34..2097#atcgacacaaaaccaaaagcgaagacgacgatcatggcgcggccgcggcgcgcttcgacggcaacgacaatgcagctggggcttctcctcgccgcgcttctcctcttcacgtcgtcgctggccggctctgtggcggcggccgcaccgccgccgccggcgggggccaagggtggtggtgccaagagcggcggcggcggcggcaccgtgatcgggatcgacctcggcacgacgtactcgtgcgtcggcgtctaccggaacgaccgtgtcgagatcatcgccaacgaccaggggaaccggatcacgccctcgtgggtcgccttcaccgacggcggcgagcggctcatcggcgaggcagccaagaaccaggcggcggccaacccggagcggaccatctacgacgccaagcggctcatcggccggcagttctccgacgccgaggtgcagcgcgacatgaagctgctgccgttcgccgtcgtcgaccggaacggcaagccgcacgtgcgcgtcgaggtgaaggacggcgacgtgcgcgtgttcagcccggaggaggtgagcgccatggtgctcacccggatgaaggagacggccgaggcctacctcggcgagaaggtcacgcgcgccgtcgtcaccgtcccggcctacttcaacgacgcgcagcggcaggccaccaaggacgccggcgtcatcgccgggctcaccgtcgaccgcatcatcaacgagccgaccgccgccgccatcgcctacggcatcgacaagaagggcgcggagaagaacgtcctcgtcttcgacctcggcggcggcacgttcgacgtcagcatcctcgccatcgacaacggcgtgttcgaggtccttgccaccaacggcgacacccacctcggcggcgaggacttcgaccaacgcctcatggaccacttcgtcaaggtcatccgccggaagcacgggcgcgacatcgccggcgacgcgcgcgcgctgggcaagctccgccgcgagtgcgagcgcgccaagcgcgcgctcagcaaccagcaccaggtgcgcgtcgagatcgagtccctgttcgacggcgtcgacttctcggagccgctctcccgggcgcggttcgaggagctcaacggcgacctcttcaagaagacgatggtgccggtgaggaaggccatggcggacgccgggctgggcaagggcgacatcgacgagatcgtcctcgtcggcggcagcaccaggatccccaaggtgcagcagctgctcaaggactacttcggtggcaaggagcccaaccgcggcgtcaaccccgacgaggccgtggcgtacggcgccgccgtgcaggccagcatcatcagcggccacgtcgacgagaacacggagagcatgatcctcctcgacgtcgcgccgctcaccctcggcctggagacggccggcggcgtgatgaccaagctgatcccgcgcaacacggtggtgccgacgaagaagacgcaggtgttcaccacgtacaaggacaggcagacgacggtgaccatccaggtgttcgagggcgagcggagcatgacgagggacaaccggctgctcggcaagttcgacctcaccggcatcgcgccggcgccgaggggggcgccgcagatcgcggtgacgttcgaggtggacgccaacggcatcctcagcgtgctggccgccgacaaggccaccggcaggtcggagaagatcaccatctccggcgacgaccgcaagatcagccaggaggagatcgaccggatggtgcgcgaggcggaggagttcgccgacgaggaccgccggcacagggagcaggtggacgcccggaacagcctggaggcgtacgtctacaacgtcaagagcacgctcggcggcaagatggcggacgccatggagggggaggagaaggagaaggtggaggaggcggtgagggaggcgcacgagtggctggacggcaacccggacgccggcaaggaggagtacgaggagaagctgcgggagctggaggacgtgtgcaaccccgtcatgtcggcggtgtaccagaggtccggcggcggcggcggcgcaccggaagatggcaacgtcgacgacgaggatgaccacgatgagctttagtttagtccggctggcggctgctaagctagctagctcctgtttcactaactatctagagttccttttttttttcattgccgtataaaataattttactaggcaaacaattatattgcaaatatattagtatttttgtattacattcatagtttggattcgatcgaaagtgtgttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0428600, RefSeq:Os05g0428600