Os08g0152600

From RiceWiki
Revision as of 20:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0152600

Description

Protein of unknown function DUF1336 domain containing protein

Version

NM_001067540.1 GI:115474816 GeneID:4344673

Length

2524 bp

Definition

Oryza sativa Japonica Group Os08g0152600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3012810..3015333

Sequence Coding Region

3013475..3014559

Expression

GEO Profiles:Os08g0152600

Genome Context

<gbrowseImage1> name=NC_008401:3012810..3015333 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3012810..3015333 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggaggagcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccaggggacacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtggggagtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagattctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaatcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctatattctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaaaggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggccttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttacgtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctattgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatctagcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgtgaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagcaacaagaaagtgcgccttttctgccggcaagattgtggcagggtttttcaaacatgttacataaccctggaaattccagggagccatcctctacttcacaaagcactaatgggagtttacacaaagaagatgcggatgagaatactagagaaagtttgcacaaagaagatgtggatgacaatactgctgggagcttgctcaaagaagatgggtacgagagtgctaccgggagttttgacaaagaagatacagaagaggactctaacgggagtttgcacaatggagatgctgatgaaaacactaaatga</cdnaseq>

Protein Sequence

<aaseq>MDCSNGEVQHQWMEDVKSGGAVPFLDPDNCPNGWATPPGDTFMV RGPDYLATKVKIPGGEYLLKPLGFDWMKSPAKICEILNNKSHRVRKAIDGEVLRGNQP FVWAFNLQLPSKDNYSAIFYFVSLEPVPEGSLMDQFLKGDEAFRKSRLKLIANIVRGP WIVRTAVGEQAICILGRALTCKYTQGSNFIEIDVDVGSSIVANAIVHLAFGYVQTLTV DLAFLIEGQTESELPERLLGAVRFSELNPGSAGVYEVPSEEQQESAPFLPARLWQGFS NMLHNPGNSREPSSTSQSTNGSLHKEDADENTRESLHKEDVDDNTAGSLLKEDGYESA TGSFDKEDTEEDSNGSLHNGDADENTK</aaseq>

Gene Sequence

<dnaseqindica>775..1859#gttttccccaataatgccaaacatcacacgctaagcctgcctgctctgctaatccccctacgcaacacaatccccttctctccttccccggaagaagaacaaagagcagctgaggcgagcaagcaaaggcaacaccaagaaagcatccaagatctctctctctctctctctctctctctctctctctctctccctcccttccacaacgctcgcctctgttcgtcctcctcatccgcaaccaccccgaaggcccaaccaagatccacaggtgaggtgagctctgtcttgtttgccgatgcttgacttgcttctgcttggagggtgtccgggttcttgattagatgcgtttccgggtgcaatccggagaggatatgttgctgaaatcacggtgttcaatcgagaaagctactaacttgattgcttgattctccggctgctcgctgtattgttctctcttgtttttttgttttttagttcagactttagagatcagagtgtgcgtgagctgttcttgattcgattcgatcactctagctagatcgaacctgcctgtgtggctaatttgattatgtagtttgtgcaattgaagaggcggacccgatttggggggcaaaattggttctttttttttgtgtgtgttctgctcttgcttacatctgcaatctacaactctgaatcttctgagcatctattttctgtccatttacattgctgtcagtttggtttctttgagtagtaataactaactagagttagcactttttgtatgtatagatggattgttccaatggtgaggttcagcatcagtggatggaggatgtcaagtcaggaggagcagtcccatttcttgaccctgacaactgccccaatggctgggctactcccccaggggacacattcatggtcagaggccctgattatcttgcaaccaaggtgaagataccaggtggggagtatcttctaaagcctctcgggtttgattggatgaaaagccccgcgaagatatgcgagattctgaataacaagagtcatcgtgtgaggaaagccatcgacggcgaggttttgcgtggtaatcagcctttcgtctgggctttcaacctgcaactgcccagcaaggataattacagtgctatattctactttgtgtcgctggagccggtaccggaaggctcacttatggatcagttcttgaaaggagatgaggctttccggaaatctaggcttaagctaatcgcgaacatagttagagggccttggattgttcgaacagctgtgggagaacaagctatttgcatattgggtagggctcttacgtgcaagtatactcagggatcaaacttcattgaaatcgatgtggatgttggatcttctattgtcgcaaacgcaattgttcatttggcgtttggttacgtgcagacgctaacagtagatctagcattccttattgagggtcagaccgaatcagagctccccgagagacttcttggagctgtgaggttctctgagttgaatccgggttcggctggtgtgtatgaagtgccatctgaggagcaacaagaaagtgcgccttttctgccggcaagattgtggcagggtttttcaaacatgttacataaccctggaaattccagggagccatcctctacttcacaaagcactaatgggagtttacacaaagaagatgcggatgagaatactagagaaagtttgcacaaagaagatgtggatgacaatactgctgggagcttgctcaaagaagatgggtacgagagtgctaccgggagttttgacaaagaagatacagaagaggactctaacgggagtttgcacaatggagatgctgatgaaaacactaaatggtaagtacaatggtgttcagttgtgcaattagctaatgtcctgcaaattgctttttgtcgtaactttcatagataaacaatgtttctatagaaaaacaactgcaatatgattgctagcagaacagtcacaacagaaggagatttattgactacttactagttatgaacagtttattccactaccattatctatgctaatgatgttaggttacccaatgatcaataatatccctatatgttgccattatcagagttacattttagagaggttgtagataacgttttctcgtgcttagggatataatgaaatatgattataatcctctgcagattttcttgaatctcctaccagtggaacttgatgcagctgcactgtcgtcgaaactccaaaaaggatatcttcattagttggggttaatatattagtccaccattgtgttgcaattcgttgaaacgatgatcaggctcaggtagctattctccatgttatcatgaccctgactggggctttcttgtgtgcccccacatctgttgtaaaaattatgcatactccattaccctgtacatattacattcaaatgcagaaattgttatgtgtgtcccattctcgtctggaaaaaaatgtaaactgaatggaatcaaatgcagagaagatgggggtattc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0152600, RefSeq:Os08g0152600