Os08g0153600

From RiceWiki
Revision as of 20:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0153600

Description

Protein prenyltransferase domain containing protein

Version

NM_001067544.2 GI:297607982 GeneID:4344678

Length

2518 bp

Definition

Oryza sativa Japonica Group Os08g0153600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3081066..3083583

Sequence Coding Region

3081066..3081085,3081948..3083583

Expression

GEO Profiles:Os08g0153600

Genome Context

<gbrowseImage1> name=NC_008401:3081066..3083583 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3081066..3083583 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcctatgtcgctgcccattcctggccagtgcccggtcccacacctgctcactctccaccgtggccgtcgcggcggccgtgcggcgcggtgacctcaccggcgcggaggaggcgttcgcatccacgccacggaagaccacggccacctacaactgcctccttgccggctacgccagggcgctcggccgcctcgcggacgcacgccacctgttcgaccgaataccgaccccggatgctgtctcctacaacacgctcctctcgtgccacttcgccagcggcgacgccgatggcgcccggaggctcttcgcatcgatgccggtcagggacgtcgtgtcctggaacaccatggtgtcggggctgtccaagagtggggccgtggaggaggccaaggccgtgttcctagcaatgccagtgaggaactccgtttcctggaacgccatggtttccgggttcgcctgctctagagacatgagcgcggcggaggagtggtttaggaatgcgccggagaagggggacgccgttctgtggactgcgatggtgtcggggtacatggatatcggcaatgtggtgaaggccatcgaatactttgaggcaatgccagtgaggaacttggtttcatggaatgctgtggttgctgggtatgtgaagaattcacatgcggatgatgctttgaggctgttcaggaccatggtcagggaggccaatgttcagccaaatgcatcgacgttaagcagcgtgcttcttggttgcagtaacttgtctgcacttggatttggtaagcagatacatcagtggtgtatgaagcttccgttgagtaggaacttgacggtgggcacgtcacttgtgagcatgtattgcaagtgtggggacttgagtagcgcgtgcaaactgtttggtgaaatgcatacgagggatgtggttgcgtggaatgctatgatatctggctatgctcagcatggagatgggaaggaagctatcaatttatttgaaaggatgaaggatgaaggagttgagcccaactggattacttttgtggcagtattgactgcttgtatccacactggcttgtgtgattttggaatacggtgtttcgagggaatgcaggaattgtacggaattgagcctcgggttgatcattactcatgcatggtggatcttctctgcagagctggtaagcttgaaagagctgtggacttgatccgctcaatgccctttgaaccacatccttctgcatatggaaccttattggctgcttgtagagtttataagaacttggagtttgctgagcttgcggctggaaaactgattgaaaaggatccacagagcgcaggtgcctatgtacaacttgcaaatatctatgctggcgcaaatcagtgggatgatgtctctagagtaaggaggtggatgaaggataatgcagttgtgaaaacacctgggtatagctggatagagattaagggtgtgatgcatgagtttagatcaaatgacagattgcaccctcagctttacttgatccatgaaaaactgggccagttagcggagaggatgaaggcaatgggttatgttccagatcttgattttgtcctgcatgatgtggatgaaactctgaaggtgcagatgctaatgaggcacagaccgaccaatgtccaatga</cdnaseq>

Protein Sequence

<aaseq>MILCRCPFLASARSHTCSLSTVAVAAAVRRGDLTGAEEAFASTP RKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRL FASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSA AEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKN SHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNL TVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMK DEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAG KLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQL ANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRLHPQLYLIHE KLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHRPTNVQ</aaseq>

Gene Sequence

<dnaseqindica>2499..2518#1..1636#atgatcctatgtcgctgcccattcctggccagtgcccggtcccacacctgctcactctccaccgtggccgtcgcggcggccgtgcggcgcggtgacctcaccggcgcggaggaggcgttcgcatccacgccacggaagaccacggccacctacaactgcctccttgccggctacgccagggcgctcggccgcctcgcggacgcacgccacctgttcgaccgaataccgaccccggatgctgtctcctacaacacgctcctctcgtgccacttcgccagcggcgacgccgatggcgcccggaggctcttcgcatcgatgccggtcagggacgtcgtgtcctggaacaccatggtgtcggggctgtccaagagtggggccgtggaggaggccaaggccgtgttcctagcaatgccagtgaggaactccgtttcctggaacgccatggtttccgggttcgcctgctctagagacatgagcgcggcggaggagtggtttaggaatgcgccggagaagggggacgccgttctgtggactgcgatggtgtcggggtacatggatatcggcaatgtggtgaaggccatcgaatactttgaggcaatgccagtgaggaacttggtttcatggaatgctgtggttgctgggtatgtgaagaattcacatgcggatgatgctttgaggctgttcaggaccatggtcagggaggccaatgttcagccaaatgcatcgacgttaagcagcgtgcttcttggttgcagtaacttgtctgcacttggatttggtaagcagatacatcagtggtgtatgaagcttccgttgagtaggaacttgacggtgggcacgtcacttgtgagcatgtattgcaagtgtggggacttgagtagcgcgtgcaaactgtttggtgaaatgcatacgagggatgtggttgcgtggaatgctatgatatctggctatgctcagcatggagatgggaaggaagctatcaatttatttgaaaggatgaaggatgaaggagttgagcccaactggattacttttgtggcagtattgactgcttgtatccacactggcttgtgtgattttggaatacggtgtttcgagggaatgcaggaattgtacggaattgagcctcgggttgatcattactcatgcatggtggatcttctctgcagagctggtaagcttgaaagagctgtggacttgatccgctcaatgccctttgaaccacatccttctgcatatggaaccttattggctgcttgtagagtttataagaacttggagtttgctgagcttgcggctggaaaactgattgaaaaggatccacagagcgcaggtgcctatgtacaacttgcaaatatctatgctggcgcaaatcagtgggatgatgtctctagagtaaggaggtggatgaaggataatgcagttgtgaaaacacctgggtatagctggatagagattaagggtgtgatgcatgagtttagatcaaatgacagattgcaccctcagctttacttgatccatgaaaaactgggccagttagcggagaggatgaaggcaatgggttatgttccagatcttgattttgtcctgcatgatgtggatgaaactctgaaggtgcagatgctaatgaggcacagtgagaagcttgctatttcttttggtctgattagtactgctcctgggatgaccttgaggattttcaagaatctcagggtttgtggagactgtcataatgcagccaaggtcatctccaagatcgaggatcgagaaatcattttgagggatactacacgattccaccattttagaggagggcattgctcatgtggtgattactggtgaagaatgtcgatgacaacagatatatactggcatttttttatggggattcagcactatttagtcctgtaacaaggaaaaatgttgatcactgtatacaggaagcactcaacagtcaacatgtgagcaatttaccaatgcgatttattcctgatgttacttttgacaggtttttatgctttccagactaggtgacaagtaatatacacattccctcgagtacatatcggtgcatgaatacatatcaagactgtatggaaggattgatgaagtgcattttacttatcacatgtaggtactagcgatttggggaattgtatgagccaattcccaacactgagtagctgcaatattgtattcctagagttgtgattttctagaatagtaaatgacttttggtcaaccttgagttttaggcctgagttcctggtcacatattttaatagagttgtgattttctagaatagtaaatgactttttgtcaaccttgagttttaggcctgagttcctggtcacatatcacatttaattcagctgtgatcagtaaactgaagttcttgactttgctggcctgtgttaaattcctgcctattcatagtagaattttgtttacctgtcctatgtgtttttttttggctttaacaaattggataaaacaggaccgaccaatgtccaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0153600, RefSeq:Os08g0153600