Os05g0429700

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0429700| Description = C2 calcium/lipid-binding region, CaLB domain containing protein| Version = NM_001062155.1 GI:115464040 GeneID:4338873...")
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Gene Name

Os05g0429700

Description

C2 calcium/lipid-binding region, CaLB domain containing protein

Version

NM_001062155.1 GI:115464040 GeneID:4338873

Length

2917 bp

Definition

Oryza sativa Japonica Group Os05g0429700, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21087952..21090868

Sequence Coding Region

21088323..21090737

Expression

GEO Profiles:Os05g0429700

Genome Context

<gbrowseImage1> name=NC_008398:21087952..21090868 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21087952..21090868 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagggagcaatgccgccgcggccgttcatgatgccggggcctgggggcccgatgcccccgccgcagcagttcggcctggtggagacgcgcccgccgctggccgccgtgctgcggccgcggttcaacatcccgggcctccacccctccgccgccgcggcctccgcggcgggcaagatcgcgtccacctacgaccttgtcgagtcgatgcggttcctctacgtgcacgtggtgaaggccaaggacctccccgctgtctccgccgccggcaccatcgaccccttcgtggaggtgaagctcggcaacttcaagggcaccacgccggtcctcggcggcaaccacaacccgtcgtggaagcaggtcttcgccttctccgcgacgcacctccaggcgcacgtgctcgaggtggccgtcaaggccaaagatctcgccggcggcgacgacctcatcggccgcgtggggttcgacctctccgaggtgccgatccgtgtgccgccggactccccgctggctccccagtggtaccggctcgagaacaagcgtggcgagaagacccgcggcgagatcatgctctccgtgtggctggggacccaggccgacgaggccttccccgacgcctggcattccgacgcccatgcggcggccggcccgggggccgtcgcctccacgcgcgccaaggtatacttctcccccaagctcgtttacctccgcgtcgccgccatcggagcgcaggacctcgtgccgctggacgcgtcgcgccccgcgaacttctgcgtcaagctgcagctcgccgggcaggtgcggcgcacgcgccccggcgcgccgcccggcacgttgaacccgatttggaacgaggagttcatgttcgtcgtgtccgagcccttcgacgagccgctgttcgtcaccgtcgaggaccgcgtcgggcctggccgcgacgagcctctcggccgcatcatgctgcccctcaacgccgcaatgccgcgccatgaccacttcggcaagccggtggagccgcggtggtacagcctcgcgcgccccagcgacgatcctgacaagaaggaaggcaagttcgcgagcaagatacagcttcggatgtcgctggactttgggtaccatgttcttgatgagtccacctactacagtagtgatctccagccatcatcgaagcacacacggaagccaagcattgggatccttgagctggggattcttggagcacgaaacttgataccaatgaaggggaaagatgggcgcaccaccgatgcttactgtgttgccaagtatggaccgaagtgggtgcgcacgagaaccattctcaacactctgaatcctcagtggaatgagcagtatacttgggaggtgtttgatccttgcacggtgattacagtggtggtgtttgacaataaccagattggcaagaatggcgatgcccgggatgagagtatcggcaaggtgagaatccggctctctaccctggagactgacagggtgtacacccatttctaccctttgttggctctcaagcccagtggccttaagaagactggagagttgcatttggctgtgcgatttacatgtacggcatgggtgaacatgattgcgctgtatggccgtccattgctgccaaagatgcactacacacagccaatctcagtgatgcagttggattacctgaggcaccaggcaatgcagattgtcgcggcgaggcttagccgtgccgagcctccacttcgcagggaggttgtggagtacatgctcgatgtgggatcgcacatgttcagtctccgccgcagcaaggccaacttctaccgtatcacctcgctgttctgtggttttgcagcgacggccaagtggtatgatggcatcagaagctggcgaaacccaattacaaccgtgttggtgcatatgttgtttctaatactgatctgctacccagagctcatcctgcctaccatcttcctctacatgttcatgattggattatggaactaccgttacaagccaaggcatccaccttacatggacactaagctatgccatgctgagtttacaaacccagatgagcttgatgaggagtttgattcattccctagcagcaggccagcggacattgtaagaatgcgctacgatagactaaggagtgttggaggtcgtgtgcagacagtcgttggtgacctggcgacacaaggtgagagagcccatgctttgcttagctggagagaccctcgggccaccgccatcttcatattcttgtccctggttgttgccattgtgctgtatgtgacaccattccaggttctgctggttattgcaatgctatacctgttgcgccacccccggttccgcagcaggatgccctctgtgcctttcaacttctacaggagattgcctgccaagtctgatatgctcctttga</cdnaseq>

Protein Sequence

<aaseq>MKGAMPPRPFMMPGPGGPMPPPQQFGLVETRPPLAAVLRPRFNI PGLHPSAAAASAAGKIASTYDLVESMRFLYVHVVKAKDLPAVSAAGTIDPFVEVKLGN FKGTTPVLGGNHNPSWKQVFAFSATHLQAHVLEVAVKAKDLAGGDDLIGRVGFDLSEV PIRVPPDSPLAPQWYRLENKRGEKTRGEIMLSVWLGTQADEAFPDAWHSDAHAAAGPG AVASTRAKVYFSPKLVYLRVAAIGAQDLVPLDASRPANFCVKLQLAGQVRRTRPGAPP GTLNPIWNEEFMFVVSEPFDEPLFVTVEDRVGPGRDEPLGRIMLPLNAAMPRHDHFGK PVEPRWYSLARPSDDPDKKEGKFASKIQLRMSLDFGYHVLDESTYYSSDLQPSSKHTR KPSIGILELGILGARNLIPMKGKDGRTTDAYCVAKYGPKWVRTRTILNTLNPQWNEQY TWEVFDPCTVITVVVFDNNQIGKNGDARDESIGKVRIRLSTLETDRVYTHFYPLLALK PSGLKKTGELHLAVRFTCTAWVNMIALYGRPLLPKMHYTQPISVMQLDYLRHQAMQIV AARLSRAEPPLRREVVEYMLDVGSHMFSLRRSKANFYRITSLFCGFAATAKWYDGIRS WRNPITTVLVHMLFLILICYPELILPTIFLYMFMIGLWNYRYKPRHPPYMDTKLCHAE FTNPDELDEEFDSFPSSRPADIVRMRYDRLRSVGGRVQTVVGDLATQGERAHALLSWR DPRATAIFIFLSLVVAIVLYVTPFQVLLVIAMLYLLRHPRFRSRMPSVPFNFYRRLPA KSDMLL</aaseq>

Gene Sequence

<dnaseqindica>132..2546#agtaacccacgctgcggcgctccccccacgccaccaccaagcaactgttcggcggaatgccacactagaggcgagacccaaggacacgctccccacgccgcaaacaaagcgccgccgccgccgccgccgagatgaagggagcaatgccgccgcggccgttcatgatgccggggcctgggggcccgatgcccccgccgcagcagttcggcctggtggagacgcgcccgccgctggccgccgtgctgcggccgcggttcaacatcccgggcctccacccctccgccgccgcggcctccgcggcgggcaagatcgcgtccacctacgaccttgtcgagtcgatgcggttcctctacgtgcacgtggtgaaggccaaggacctccccgctgtctccgccgccggcaccatcgaccccttcgtggaggtgaagctcggcaacttcaagggcaccacgccggtcctcggcggcaaccacaacccgtcgtggaagcaggtcttcgccttctccgcgacgcacctccaggcgcacgtgctcgaggtggccgtcaaggccaaagatctcgccggcggcgacgacctcatcggccgcgtggggttcgacctctccgaggtgccgatccgtgtgccgccggactccccgctggctccccagtggtaccggctcgagaacaagcgtggcgagaagacccgcggcgagatcatgctctccgtgtggctggggacccaggccgacgaggccttccccgacgcctggcattccgacgcccatgcggcggccggcccgggggccgtcgcctccacgcgcgccaaggtatacttctcccccaagctcgtttacctccgcgtcgccgccatcggagcgcaggacctcgtgccgctggacgcgtcgcgccccgcgaacttctgcgtcaagctgcagctcgccgggcaggtgcggcgcacgcgccccggcgcgccgcccggcacgttgaacccgatttggaacgaggagttcatgttcgtcgtgtccgagcccttcgacgagccgctgttcgtcaccgtcgaggaccgcgtcgggcctggccgcgacgagcctctcggccgcatcatgctgcccctcaacgccgcaatgccgcgccatgaccacttcggcaagccggtggagccgcggtggtacagcctcgcgcgccccagcgacgatcctgacaagaaggaaggcaagttcgcgagcaagatacagcttcggatgtcgctggactttgggtaccatgttcttgatgagtccacctactacagtagtgatctccagccatcatcgaagcacacacggaagccaagcattgggatccttgagctggggattcttggagcacgaaacttgataccaatgaaggggaaagatgggcgcaccaccgatgcttactgtgttgccaagtatggaccgaagtgggtgcgcacgagaaccattctcaacactctgaatcctcagtggaatgagcagtatacttgggaggtgtttgatccttgcacggtgattacagtggtggtgtttgacaataaccagattggcaagaatggcgatgcccgggatgagagtatcggcaaggtgagaatccggctctctaccctggagactgacagggtgtacacccatttctaccctttgttggctctcaagcccagtggccttaagaagactggagagttgcatttggctgtgcgatttacatgtacggcatgggtgaacatgattgcgctgtatggccgtccattgctgccaaagatgcactacacacagccaatctcagtgatgcagttggattacctgaggcaccaggcaatgcagattgtcgcggcgaggcttagccgtgccgagcctccacttcgcagggaggttgtggagtacatgctcgatgtgggatcgcacatgttcagtctccgccgcagcaaggccaacttctaccgtatcacctcgctgttctgtggttttgcagcgacggccaagtggtatgatggcatcagaagctggcgaaacccaattacaaccgtgttggtgcatatgttgtttctaatactgatctgctacccagagctcatcctgcctaccatcttcctctacatgttcatgattggattatggaactaccgttacaagccaaggcatccaccttacatggacactaagctatgccatgctgagtttacaaacccagatgagcttgatgaggagtttgattcattccctagcagcaggccagcggacattgtaagaatgcgctacgatagactaaggagtgttggaggtcgtgtgcagacagtcgttggtgacctggcgacacaaggtgagagagcccatgctttgcttagctggagagaccctcgggccaccgccatcttcatattcttgtccctggttgttgccattgtgctgtatgtgacaccattccaggttctgctggttattgcaatgctatacctgttgcgccacccccggttccgcagcaggatgccctctgtgcctttcaacttctacaggagattgcctgccaagtctgatatgctcctttgagcccaatgcattgagaacaagagaaaatggaggaaaccctgtaactttgtttctctcttccattcagttccctactgattagcatcagatcagatgtgaatatacttaaggagttggtaaattagaggcaagttagcggccagggaataatgtgttcattcgaatgttatttgctcagataggcagaaagaagggattgactggaccccttcgagtttgggggggcagagtttgttaatgtcgtgtttcttggggtaagaacaataggcaggcgcaagctaatcttcagtgtattttgtttatggatttgtgccaattttgttattttcttcatgtaatcatgtactacctgttggatgatgatgttttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0429700, RefSeq:Os05g0429700

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os05g0429700&oldid=14219"