Os08g0161500

From RiceWiki
Revision as of 20:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0161500

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001067585.1 GI:115474906 GeneID:4344723

Length

5058 bp

Definition

Oryza sativa Japonica Group Os08g0161500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:3595521..3600578

Sequence Coding Region

3595636..3596166,3597761..3597808,3597906..3598142,3599015..3599051,3599658..3599974

Expression

GEO Profiles:Os08g0161500

Genome Context

<gbrowseImage1> name=NC_008401:3595521..3600578 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:3595521..3600578 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgtcggggtgcacggtgtccagtctcgcggcgaggttcgccttcttcccgccggagccggcgacctacgccgtcaggaaggatgaggcgtgcggcggcggagggcggctggtggcgtcgggcgtcccgcgggacgccgccgtggacgtgctgctggtggacaccaggaaggggagcaaggtggtggccttctacctgaggaaccccgccgcccgcctcaccgtgctctactcgcacggcaacgccgccgacctcggccagctctacgacctcttcgtgcagctcaaggtcaatctcaaggtcaatctgatgggatatgactactctgggtatggagcatctactggcaagccaagtgaagagaatacatatgcagacattgaggcagtttaccagtgcttagaaacagagtatggaatcagtcaggaagaccttatcttgtatggacaatctgttggcagtggacctacattgcatttagcttcccgtttaccaagattgcgtggcgtggttcttcatagcgctatactgtcaggcctccgagttgtttgccatgtgaactttactttctgctttgacatctacaaaaatgtgaagaaaatcaaaaaggttaaatccccagtgcttgttattcatggaactgatgatgatgtcgtgaactggtcgcatggtaacgagctgtggaaactggcgagggagccttacgatccgctatggatcaaaggaggaggccattgcaacctggagctgtacccggacttcatccgccacctctccaagttcatccgcgagatggagaacatcacaacgaagacaaggcttaagaagatccggcagtccctgcaacccgcacctaagaaggtccaccaccgggcgagcaccgggacgaccaccaccttcaccaccaactgctgctgccgcatccgggtccgcaaaccgagttgccgttgccctggctgcaacctaagctgcggctgctgctctggtctgatgagttgcttctcatcccggctgttcaagtgctcaacctgcttctcctcctgcagctgcaggggatgcttcaagtgcccaacctgcttctccttctcctgcagctgctgcaggagctgcctcaagtgcccaaccttcaaatgctgctgctgcggttcatgcagagatgagcaataa</cdnaseq>

Protein Sequence

<aaseq>MLSGCTVSSLAARFAFFPPEPATYAVRKDEACGGGGRLVASGVP RDAAVDVLLVDTRKGSKVVAFYLRNPAARLTVLYSHGNAADLGQLYDLFVQLKVNLKV NLMGYDYSGYGASTGKPSEENTYADIEAVYQCLETEYGISQEDLILYGQSVGSGPTLH LASRLPRLRGVVLHSAILSGLRVVCHVNFTFCFDIYKNVKKIKKVKSPVLVIHGTDDD VVNWSHGNELWKLAREPYDPLWIKGGGHCNLELYPDFIRHLSKFIREMENITTKTRLK KIRQSLQPAPKKVHHRASTGTTTTFTTNCCCRIRVRKPSCRCPGCNLSCGCCSGLMSC FSSRLFKCSTCFSSCSCRGCFKCPTCFSFSCSCCRSCLKCPTFKCCCCGSCRDEQ</aaseq>

Gene Sequence

<dnaseqindica>4413..4943#2771..2818#2437..2673#1528..1564#605..921#gcgtgcgtggctggctgaaggctgtgagagtgtgaggtctagctgtgcaatgtgcaggtgcagccatcgctgctgctgctgctgctctgctcttttcatgttgacacttcgctaaacccctcccaaaacctcctccccccccccccccccccgatgcgttcttggccagggtcgggagcgaggcgttcttgatttttttcttcttctgtttttgttcttgattgattggattggggagtgattcggtttgttcttgattttgattttttgttgttgttgttgttgtttggggagaaagagacgaaggggaagctgtgattttctcttcctttccaccgagagaaaattttttgatctgtttgttgtttcttggaatcggttttggttcaagaacaggcgccgccttttgttccgggaaattcgcttgtgatcctccgaaacccagaatttcttttttcgatccgttttgatcgattgaaagcaaatatcatcttgaaaaggatcgttcttgctggtgttggtttggggaggagggggaggttttccctctgacgagcaagcaaagcatttggggccgcctgtcgatgactgagggtttgatccgatgctgtcggggtgcacggtgtccagtctcgcggcgaggttcgccttcttcccgccggagccggcgacctacgccgtcaggaaggatgaggcgtgcggcggcggagggcggctggtggcgtcgggcgtcccgcgggacgccgccgtggacgtgctgctggtggacaccaggaaggggagcaaggtggtggccttctacctgaggaaccccgccgcccgcctcaccgtgctctactcgcacggcaacgccgccgacctcggccagctctacgacctcttcgtgcagctcaaggtcaatctcaaggtcaatctgatggggttagtggtgccattatcatgctgctttcttggtcatctatctatctatctatactatagtactagcatcttttcctgttgtctttttctttatttatgtactctgttagtcaaatcaaatgcttatttaattgcttagagattgtggtgcagcaaagcaatgcattccttgttaggagatactgtgctttgtggtgtaattgaagaatttgctttggtgaaatttgtgagtagtagtgtgcaatgcatgtattggttttgttaagcatgagataattgaaagcagacaaataattgggaatggtgggtatgtgggggagggggggagttgctgctactttttccccactaggtattttggggagttgctcaataatgaattgtagcatgttctgttcagtcctgaagtttcactaattgttcaaattattgcatatcactggttttagtccagagcatccttaatcttatcacataagtagtccagtcattactccaggaagcagttcatttcccctttcattatgaatttatgatttcaatatgttttggaggtacagttatgagaacatactggtggaatttactatgtaattttgtatgcagatatgactactctgggtatggagcatctactggcaaggtaacttatttatcatgtgtgaactgtgttaaatcatgccatgtacatgctacagctgagttgatattcaagtttggccagtgattgcttattatactagctgtaaaatttactagtagcgttcctggactaatgcaggcataattaggattttagcagcctaattagaaagttgccgtaataaatctgaaaggatctatacatgctagatacctcgacaactgtggttcagtttcacttttcaagaatatgctgcatgtatctctaccagaagagagtttggcccatacctgactggtccatttcaggcatagcatggccagtgcatcttaaactgcttctccatgatagcaatcatcactatgtttttaacttattgttatatccttatagcttttgtttttagccatgcttgctgtcgaaatatgtcagcccattagatatttgggcgctatatttttataatatatgtcgtgcactggatatcaccacatacatgttctctatttaagtggagttgtttactgttatttaattgtttgattcattcttgaagtttcaaaaaagtgaatgccatcctatcttgattattttcggtcatcaatgctgagaaacctgctttcagtacagggagaattcccaccttagtaatgttaggcatggtgtgtttgaatctcttttttgcctataggatattaatggctgcttggatggtatatgtccatttgagctaaatcagatgtcacgtaaacttttaaatactgccccttattggcgtttgtactgaattactactatcaagtgtttctgatttattcctgaagaaacacacttttgaggcgccaatcttatgcttgttatttgaagtgcagccaagtgaagagaatacatatgcagacattgaggcagtttaccagtgcttagaaacagagtatggaatcagtcaggaagaccttatcttgtatggacaatctgttggcagtggacctacattgcatttagcttcccgtttaccaagattgcgtggcgtggttcttcatagcgctatactgtcaggcctccgagttgtttgccatgtgaactttactttctgctttgacatctacaaagtaatatatcggatttattctttttaatctttagctttgttgcctttaggagtaactttttatattttactaatatctgatcaactttcctctgcagaatgtgaagaaaatcaaaaaggttaaatccccagtgcttgttattcatgtaagtatcttactaattaaataggaatctttttctgtatatatttgctgttctcttggatagtttgttatacattcaaatcaatctgcatcttccgctttttcaatcttttggaataattaactgcttatgctttggtagtgctgtggttaccgatgctacttagttgcggttattggagaaatagccagataatcaaactagttctagtaacaggcgatcaatgtattcaagtcctagcaagctagttcatgactatacaaaagatgttatagtagggtagtaaggtactgttgcatatattcctttatactccctccgttttttaatagatgacgccgttgactttttctcacatgtttgaccattcgtcttattcaaaaaaattacgtaattataatttattttgtaataggttgttttatcactcatagtactttaagtgtgatttatatcttatacatttgcataaaatttttgaataagacgaatggtcaaacatgtgagaaaaagtcaacggcgtcatctattaaaaaacggaggtagtacatgttaaagtaaagaccaaaagaaatcggcctcatttcttttagtaatatactatatacctgaaactgcttcaactagtttacgactgcagttataggctaatccattggactggaatacaataaatagaatggactctcaaagaagaaataaatcatagaatattagaacaactgatgtgcattagcacatgctggacattaggacatatgaggaggtgggaggtgccactaactatggcagtgtcacgctgtgaacttctgctgttctgggtttgtttgagactaagccaaatgtgtagtcattgaagacagctgtggggttaggcccatattttctggcccaaaacttgcataggtatctgaaagtaggaggtctggagagttatgtggcaggaagccaagccaggaaatgtaatgtaatcgacagctctaactgaaacatcccttataagttatttttagggaacaaacccttataagtaatcacacttcataatgaggcacattactcctctaactgaaacatcccttataagttatttttagggaacaaacccttataagtaatcacacttcataatgaggcacattactcatctataaaatcaatgtggatagattgatcatcatgacctacatgtgagctgtcgattagattagatttcctggcttcctgtcacataactctccacgcctcctattttcagattatgaaatgacttcgtggcaattaggtaaaaacaattaacgttgcttttcccaccattttgatgatgccatgaaactgggggacctatatcttttctacagacgcacactttgaccttgaccagttttaaaaccaatgcaacagcagcttcctgaccaaacgaacctgttttgttgaagacaaataatatgagggttttataatatctaatgttgataatttatcttactctgtcaaattttatttaatgcgctctccacaatcgtgttgtgtccatttctttcctaaatttcctgagtatcaacttcattgtatgcccgattgatattggcagggaactgatgatgatgtcgtgaactggtcgcatggtaacgagctgtggaaactggcgagggagccttacgatccgctatggatcaaaggaggaggccattgcaacctggagctgtacccggacttcatccgccacctctccaagttcatccgcgagatggagaacatcacaacgaagacaaggcttaagaagatccggcagtccctgcaacccgcacctaagaaggtccaccaccgggcgagcaccgggacgaccaccaccttcaccaccaactgctgctgccgcatccgggtccgcaaaccgagttgccgttgccctggctgcaacctaagctgcggctgctgctctggtctgatgagttgcttctcatcccggctgttcaagtgctcaacctgcttctcctcctgcagctgcaggggatgcttcaagtgcccaacctgcttctccttctcctgcagctgctgcaggagctgcctcaagtgcccaaccttcaaatgctgctgctgcggttcatgcagagatgagcaataatgcaaatctctatgtgcttgtgtataggaaaaagagtggttccgatatatctgacaagtttaattctgtagaaactagaccttggttctcttagctaaacaaaccatagcaagat</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0161500, RefSeq:Os08g0161500