Os08g0171800

From RiceWiki
Revision as of 20:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0171800

Description

Protein of unknown function DUF617, plant family protein

Version

NM_001067634.1 GI:115475004 GeneID:4344776

Length

1472 bp

Definition

Oryza sativa Japonica Group Os08g0171800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:4210446..4211917

Sequence Coding Region

4210909..4211856

Expression

GEO Profiles:Os08g0171800

Genome Context

<gbrowseImage1> name=NC_008401:4210446..4211917 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:4210446..4211917 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcttcgctccccaccccgtcgtcgtccccaccgccgccatggacgggaccagcagcgttagcgcgcggacggcctcgtctctgtcgtcgtcgtcgtcgtcgctcgacgacggcggccgtggccggcctccgccggccgggtcgacgctggagctgccgtcgcggaagcactaccggtacccttcccggtcggcgaggctgttccagaagctgcgccgctcgctcccgctgctgacgctggcgccgcggtgcggccggatgcaggtcggctcggcgagcgaggtcgccgcggcggcggcgtccggcggaggaggaggaggagcagccgactcgcacctgatgtcgcacgtcgtgtcgtcgttctccggcgcggcgcggccgatgcggcgggtgacggggacgctgttcggccaccgcaagggccgcgtcgcgctggcgctgcaggagacgccgcgctgcctgcccaccctcgtcatcgagctcgcgatccagacgaacgcgctgctccgggagctcgccaaccccgccggcgcgcgcatcgtcctggagaccgagcgccgcgcgccatccacggacgccgccgccggcaagcaccggagggcgccgccgctgctggacgtggcggcgtggaccatgttctgcaacgggaggaagaccgggctcgcggtgcggcgggaggcgacggacgacgacctcgcggtgctggagacgctgcgccccgtctccatgggcgccggcgtgctccccgcctccaacaggtcgtcgtcgtcgtcgtctcagtcgccggagaagggggcggcggcggcggacgacgaggtggcctacatgcgcggctgcttcgaccacttcgtcggctcgcgcgactccgagtcgctctacatgatcgcgccccagggcggcggcaccggcccggagctcgccatcttcttcgtcaggctatga</cdnaseq>

Protein Sequence

<aaseq>MGGFAPHPVVVPTAAMDGTSSVSARTASSLSSSSSSLDDGGRGR PPPAGSTLELPSRKHYRYPSRSARLFQKLRRSLPLLTLAPRCGRMQVGSASEVAAAAA SGGGGGGAADSHLMSHVVSSFSGAARPMRRVTGTLFGHRKGRVALALQETPRCLPTLV IELAIQTNALLRELANPAGARIVLETERRAPSTDAAAGKHRRAPPLLDVAAWTMFCNG RKTGLAVRREATDDDLAVLETLRPVSMGAGVLPASNRSSSSSSQSPEKGAAAADDEVA YMRGCFDHFVGSRDSESLYMIAPQGGGTGPELAIFFVRL</aaseq>

Gene Sequence

<dnaseqindica>62..1009#attcccccaaggcgccgcaacgttccccgacgccggccggccgcccacggccctcgcgcgcatgggcggcttcgctccccaccccgtcgtcgtccccaccgccgccatggacgggaccagcagcgttagcgcgcggacggcctcgtctctgtcgtcgtcgtcgtcgtcgctcgacgacggcggccgtggccggcctccgccggccgggtcgacgctggagctgccgtcgcggaagcactaccggtacccttcccggtcggcgaggctgttccagaagctgcgccgctcgctcccgctgctgacgctggcgccgcggtgcggccggatgcaggtcggctcggcgagcgaggtcgccgcggcggcggcgtccggcggaggaggaggaggagcagccgactcgcacctgatgtcgcacgtcgtgtcgtcgttctccggcgcggcgcggccgatgcggcgggtgacggggacgctgttcggccaccgcaagggccgcgtcgcgctggcgctgcaggagacgccgcgctgcctgcccaccctcgtcatcgagctcgcgatccagacgaacgcgctgctccgggagctcgccaaccccgccggcgcgcgcatcgtcctggagaccgagcgccgcgcgccatccacggacgccgccgccggcaagcaccggagggcgccgccgctgctggacgtggcggcgtggaccatgttctgcaacgggaggaagaccgggctcgcggtgcggcgggaggcgacggacgacgacctcgcggtgctggagacgctgcgccccgtctccatgggcgccggcgtgctccccgcctccaacaggtcgtcgtcgtcgtcgtctcagtcgccggagaagggggcggcggcggcggacgacgaggtggcctacatgcgcggctgcttcgaccacttcgtcggctcgcgcgactccgagtcgctctacatgatcgcgccccagggcggcggcaccggcccggagctcgccatcttcttcgtcaggctatgaccaccaccaccacctactcgccggctcgccggcgatgcaccgatcaatccatcgccaccgccatcgcgcgcgccatgcaaagcaagacgaagggcgcgtcgtgattcgtgcagccctcttgacggcctcgagattcgtgaggagcaggcgagccacctcgactccctacgtcagagatggcttagcttaaatttaatcatctgattaagcactaatcttgtgctcttagtgggtgattaggttgtgaggaggtcattgcataaatcgggtttaatggtggtgcccaacacctcattgcacacacaatctagtggagtacggagaaaattatattaattaattaagttgcttgcttttgctttcttctctctcgcgtttaattatcggatggtaattttgcataatttatttgtcagtgcaaagaatttgagaattacatataaactccattttggtttagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0171800, RefSeq:Os08g0171800