Os05g0432400

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Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0432400| Description = Protein of unknown function DUF1682 family protein| Version = NM_001062166.2 GI:297604560 GeneID:4338884| Length = 2...")
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Gene Name

Os05g0432400

Description

Protein of unknown function DUF1682 family protein

Version

NM_001062166.2 GI:297604560 GeneID:4338884

Length

2844 bp

Definition

Oryza sativa Japonica Group Os05g0432400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21208852..21211695

Sequence Coding Region

21208894..21209934,21210779..21210982,21211067..21211294

Expression

GEO Profiles:Os05g0432400

Genome Context

<gbrowseImage1> name=NC_008398:21208852..21211695 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21208852..21211695 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcctcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccgacgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggctcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctcccgtcaccaccaccaccaccaccacctccgctccaaaccctaaccccgatcccaacccgacgctgaccccgccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtcccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatcccgcggccgatgccgcggccgaggcggcgccagccccgccccggcggcccgcggagctgctccgcgcgtacaccgtcgagatcgcgtgcgtcagcttcctgatctgcttcctgctcaactacttcaccgggaagcggcagaacgaggcgatcgcgctcgcctgggccaccaggttcgccaccagggactccatcttcgacaagaacttcagcctcctcggcaccggcgacggcaaggacacgccgctcctgatgaaggaagggcaggacgtgttcaagttctacgcgagcgggaggcggtactgccaggggatgctcgccaccatggagatgcgcgcgcggcacgacctgctgtccaagctggtggagctggtgttccccaggaaggacaccatcacgttcgaggtggtgatgaacgaggaagccatggaccacgtcatgttggccgtggcgaggaagaaggcggccaagacgatgcagaaggaggagagggatctgcagaaatttgccggggttctgacctcggcacccgccgggaggagatgggttgcggatgagcttgcggtagtggccgagtcaaaggaggttgctggggatatgattactgaagccgtgctggaccaggtccttggtgacaaagcttttgagaaatttgggaaatggttcatctcacttcatttttcagatcaactggcaggctcttacaagaaagtcctttctttcaagtttgtactgccagatgcaagcaacatggctgagatgacaagattagttgctctcgtgccatactacattgatttggtggggcgttacaagctcagcaaccatgctcgttccaaaactgaagctgcaagaacaaaagcttcccaggaggctttcagggagcaacagggtctaaggcaggaagcccttcaaaggaagaaggctgagaagaaaaaacttatggaagaggcagaggccaaattgagcgccgaggcactccgcaagaaagaggaaaaagaaagggctcgtcagatgaagaagtccatgcccaaagttaaaatgctccgttcctag</cdnaseq>

Protein Sequence

<aaseq>MATASSIRPPRAALVLLLLALSFSLTLAAHFEGFGSDDLHSAHA DAASADDEDDEGLDVELPPPPRISLSTSTPSPPVTTTTTTTSAPNPNPDPNPTLTPPN PTPTLDLWDEDEFEGIPVPEAASSDESSTPAEAAPSDPAADAAAEAAPAPPRRPAELL RAYTVEIACVSFLICFLLNYFTGKRQNEAIALAWATRFATRDSIFDKNFSLLGTGDGK DTPLLMKEGQDVFKFYASGRRYCQGMLATMEMRARHDLLSKLVELVFPRKDTITFEVV MNEEAMDHVMLAVARKKAAKTMQKEERDLQKFAGVLTSAPAGRRWVADELAVVAESKE VAGDMITEAVLDQVLGDKAFEKFGKWFISLHFSDQLAGSYKKVLSFKFVLPDASNMAE MTRLVALVPYYIDLVGRYKLSNHARSKTEAARTKASQEAFREQQGLRQEALQRKKAEK KKLMEEAEAKLSAEALRKKEEKERARQMKKSMPKVKMLRS</aaseq>

Gene Sequence

<dnaseqindica>43..1083#1928..2131#2216..2443#aggagaattatccccacttccagagtccaaacctccccgtccatggcgacggcgagctcgatccggccgccacgcgcggcgctagtcctcctcctgctcgcgctgtccttctccctcaccctcgccgcccacttcgagggctttggctccgacgacctccactccgcccacgccgacgcggcctcggcagacgacgaagacgacgaggggctcgacgtcgagctcccgccgccgccgcgcatctccctctccacttcaactccttcccctcccgtcaccaccaccaccaccaccacctccgctccaaaccctaaccccgatcccaacccgacgctgaccccgccgaaccccaccccgacgctcgatctctgggacgaggacgagttcgagggcatccctgtcccggaagcggcctcctccgacgaatcctccacgccggcggaagccgccccgtcagatcccgcggccgatgccgcggccgaggcggcgccagccccgccccggcggcccgcggagctgctccgcgcgtacaccgtcgagatcgcgtgcgtcagcttcctgatctgcttcctgctcaactacttcaccgggaagcggcagaacgaggcgatcgcgctcgcctgggccaccaggttcgccaccagggactccatcttcgacaagaacttcagcctcctcggcaccggcgacggcaaggacacgccgctcctgatgaaggaagggcaggacgtgttcaagttctacgcgagcgggaggcggtactgccaggggatgctcgccaccatggagatgcgcgcgcggcacgacctgctgtccaagctggtggagctggtgttccccaggaaggacaccatcacgttcgaggtggtgatgaacgaggaagccatggaccacgtcatgttggccgtggcgaggaagaaggcggccaagacgatgcagaaggaggagagggatctgcagaaatttgccggggttctgacctcggcacccgccgggaggagatgggttgcggatgagcttgcggtagtggccgagtcaaaggaggttgctggggatatgattactgaagccgtgctggaccaggtgatgatttaacctgcttacttatttttagaattgctgtttttagcttcggtggtactgggtaaatggttcttctggtaagattgtacagatgatatagtgaggtgtcctgttgatgttgattcttttatgaaagtaatataggtaagtgccttctaaaacgaaacggtatatattacaaattatcatcaaataatttggaagtgagaaaggtgcaatattcgacattcgagaaacatctcactcccttcaattatatcattaatcactaacttcaatatggatgaagtgtaaaggaattaaattgtgaattgatctgagtttcttactttttgggtgaattggcaccaattggattctattatgttcataactattcttgtaccaagattttcccagaatagtaactgtggatcaagtaatgtgatgatggcttgtattatcatttcattatgtttgtaatttaataatatcatcaggcttttgcataaggcagtgttgatattgaacatgccatatttgtcttgggaaagtcggggtactgttcctagctgttgatgttttgcacatttggatagcgaagaacttagggagtaccttgaatttttgactgctagagttctaccaaagtcgccatctatatcttttttaacgactgaagtagcctgtcttaatgctatgataaagaaaattagatggaaggtttagtaattaaggattgacatagctttgctcagaattttgtcatgggctggctcaatatgatccgcatgtctttagtaagactgagcaatgctatacagtggcatacatatataatgttttacaacctgtttctctgcaggtccttggtgacaaagcttttgagaaatttgggaaatggttcatctcacttcatttttcagatcaactggcaggctcttacaagaaagtcctttctttcaagtttgtactgccagatgcaagcaacatggctgagatgacaagattagttgctctcgtgccatactacattgatttggtggggcgttacaagctcagcaaccatgtgagtatctcctctatctttgttttaggccacaaccatttttcggttacagtgtctaattcttcttattcatggtaattgcaggctcgttccaaaactgaagctgcaagaacaaaagcttcccaggaggctttcagggagcaacagggtctaaggcaggaagcccttcaaaggaagaaggctgagaagaaaaaacttatggaagaggcagaggccaaattgagcgccgaggcactccgcaagaaagaggaaaaagaaagggctcgtcagatgaagaagtccatgcccaaagttaaaatgctccgttcctagtaacatcaaagatatatcacagcactggctttagctattcagttgctgattagcttattgttgcctgccagactcttttatgttcttctgggccatcaacttttctttgccatggggggatacaagcgaaaggaaataggtgaagataatcttttgctgttgtttcagcttgtcgcttgttgggggattaatttgaaacgctgttttccttgtattaatatacgcaggctggaatggcgtcaagtttgatttgcccccacgatcgttcattttagttcatctgaatgttgttatgcagcagctcgtttgtaagagaactccatgacttgctgtgtaatgcgtttatagatacgctgccagaaactcaagactagatcacataatttgagttgatttatgag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0432400, RefSeq:Os05g0432400