Os08g0191200

From RiceWiki
Revision as of 20:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0191200

Description

Phosphoribosylglycinamide synthetase domain containing protein

Version

NM_001067705.1 GI:115475146 GeneID:4344854

Length

3943 bp

Definition

Oryza sativa Japonica Group Os08g0191200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:5340452..5344394

Sequence Coding Region

5340889..5341153,5341345..5341718,5342201..5342731,5343647..5344060

Expression

GEO Profiles:Os08g0191200

Genome Context

<gbrowseImage1> name=NC_008401:5340452..5344394 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:5340452..5344394 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtctgctgctgccgcttacggcgtcggggctccactcaagctcgctgcaaggcggcatggggcactcgcgctggccggtagccatcgctgcagtggatggaagtcttcagtgtcttgccctgttcctcaggcttggatgggcagttgctcttctgtcgcaatgcgccgtgtcgcctccggttctcgattgattgttcaggcttcaaacagcgggggctcaagcttgaaggcatcattggctgatgctagcctgcttactgaagagaggataactgttttggtgattggaggtggaggaagggagcacgctctctgttacgccttgaatcgctctccgtcttgtgatgcggtcctatgtgcccctgggaacgcaggtattgctcagtctggagatgcgacctgtatatcggacttagacgtctccgatagcgatgccgttatcgcgttctgctgcaagaggggagtgggaatggttgtagtaggtcctgaagctcctcttgttgccggtcttgtgaatgaccttgtgaaagctgagataccagcatttggtccttcctcagaagctgcggctttagaaggatcgaaggactttatgaagaaattatgcgataagtacaatattcctacagctaagtatcgcacattcacagatcctgcagaagctaaacaatatgtcaaagatcaaggcgcccctattgttgtcaaagctgatggattggcagctggaaaaggcgtggttgttgctatgactttggatgaggcatttgaagccatagactctatgctggttcaagggtcatttggttctgctggttcacgggttatcattgaagaatatctggagggtgaagaagcctctttctttgcattagtggatggtgaaaatgcattgccacttgaatcggcacaagatcacaaaagggttggtgatggtgatgtaggcccaaatactggtggtatgggtgcatattcccctgcaccaatagtgacagaagagcttaagcacacaattatggatagtataataatcccaacagttcaaggtatggcagctgaaggatgcaagtttgttggtgtattatatgctggacttatgattgagaagaaatctggtctgcctaagcttatcgagtacaacgtacgattcggtgacccagaatgccaggttcttatgatgcgattagaatccgatctagcacaggttctgatgtctgcgtgcagaggggaactgggcgatgtttcactaacctggtcacctgaaatggcaatggtggttgtgatggcaagcgaaggataccccggatcttataagaaggggactgtaataagaaatctcgagaaggccgagcaggtctcgcccgcggtaaaaatattccatgctggaacagcactggatggggatggaaatcttgtcgctgtcggaggccgggtgctcgggatcacggctaagggcaaagacattgaggaagcacgggcaagagcatatgatgcagtagatgttgttgactggcctgaaggattcttcaggcgcgatattggttggagagcactgaagcacaagcaagtggccaattactga</cdnaseq>

Protein Sequence

<aaseq>MASAAAAYGVGAPLKLAARRHGALALAGSHRCSGWKSSVSCPVP QAWMGSCSSVAMRRVASGSRLIVQASNSGGSSLKASLADASLLTEERITVLVIGGGGR EHALCYALNRSPSCDAVLCAPGNAGIAQSGDATCISDLDVSDSDAVIAFCCKRGVGMV VVGPEAPLVAGLVNDLVKAEIPAFGPSSEAAALEGSKDFMKKLCDKYNIPTAKYRTFT DPAEAKQYVKDQGAPIVVKADGLAAGKGVVVAMTLDEAFEAIDSMLVQGSFGSAGSRV IIEEYLEGEEASFFALVDGENALPLESAQDHKRVGDGDVGPNTGGMGAYSPAPIVTEE LKHTIMDSIIIPTVQGMAAEGCKFVGVLYAGLMIEKKSGLPKLIEYNVRFGDPECQVL MMRLESDLAQVLMSACRGELGDVSLTWSPEMAMVVVMASEGYPGSYKKGTVIRNLEKA EQVSPAVKIFHAGTALDGDGNLVAVGGRVLGITAKGKDIEEARARAYDAVDVVDWPEG FFRRDIGWRALKHKQVANY</aaseq>

Gene Sequence

<dnaseqindica>438..702#894..1267#1750..2280#3196..3609#atcaacgccgctcgctcactactcgcgccgccgcttccgccgccgctccgctccagtcgcgtcggcttcccgcctcctcgccggcgagccgtgcctcgacgctctccctctgttgctccgccggccagcagcatgccgcgcttctgctcccactagctcccgccaccgccgcccctactgagcccggtgagaccgtgaggcggtggtgtgcaccagtccggcagttcgcccccctcctcctcccaatccggccgccgcttcatcaccgccggcgaggctccgcgtctcctcctaggtcgcgctgcttcgtatcacagagagaggtgagccccttgcaacttgttgccagagttgccagaaacaaaaaagatcgatgttcttggactgaatcgattgtttcttggtaggccagctcggtctccggataagcaagaaccatggcgtctgctgctgccgcttacggcgtcggggctccactcaagctcgctgcaaggcggcatggggcactcgcgctggccggtagccatcgctgcagtggatggaagtcttcagtgtcttgccctgttcctcaggcttggatgggcagttgctcttctgtcgcaatgcgccgtgtcgcctccggttctcgattgattgttcaggcttcaaacagcgggggctcaagcttgaaggcatcattggctgatgctagcctgcttactggtaaagtagtattagattagctcagcttattttgttctttcttcaggtggtttatgtttatggaaaagaaaaatccaaagtcccaatgcgctatgagatgaaactttgtcgttgagttagtcgagagaacttgttattagatgcaaagtctggggcaatggtttaatttcctgtttcctgtttcatttcagaagagaggataactgttttggtgattggaggtggaggaagggagcacgctctctgttacgccttgaatcgctctccgtcttgtgatgcggtcctatgtgcccctgggaacgcaggtattgctcagtctggagatgcgacctgtatatcggacttagacgtctccgatagcgatgccgttatcgcgttctgctgcaagaggggagtgggaatggttgtagtaggtcctgaagctcctcttgttgccggtcttgtgaatgaccttgtgaaagctgagataccagcatttggtccttcctcagaagctgcggctttagaaggatcgaaggactttatgaagaaattatgcgataagtacaatattcctacagctaaggtaccttctttttacattagttttcagccctataagtttaatctttctgggacaatgaacatttgctccaatgagagtacggggtgcctaaatttggttgatgtgatatccatgtttaagaaagaaccaaagatgcatcatttcaggcataatcacactgatatttcctttgtattgttacaaggttgctaaccaagttcatatttgacttgcttgatagtatatcagttatagacaatataagtaatcatctcagagttaatgatatatcttcagctttctaggtgaactgtacttaagcattgcccatatgtcctgaaatttcccttgggattgcctgagttttgaaataaagtcattgtgttgtactgtaaacgttctagaaaagatagggaaaaacagagctcctctacataagtctatatgtataatttgagatgttaataataatggtaacataagtgcttatatttcttttatagtatcgcacattcacagatcctgcagaagctaaacaatatgtcaaagatcaaggcgcccctattgttgtcaaagctgatggattggcagctggaaaaggcgtggttgttgctatgactttggatgaggcatttgaagccatagactctatgctggttcaagggtcatttggttctgctggttcacgggttatcattgaagaatatctggagggtgaagaagcctctttctttgcattagtggatggtgaaaatgcattgccacttgaatcggcacaagatcacaaaagggttggtgatggtgatgtaggcccaaatactggtggtatgggtgcatattcccctgcaccaatagtgacagaagagcttaagcacacaattatggatagtataataatcccaacagttcaaggtatggcagctgaaggatgcaagtttgttggtgtattatatgctggacttatgattgagaagaaatctggtctgcctaagcttatcgagtacaacgtacgattcggtgacccagaatgccaggttagtgattctctatctataaactctaaccttcaatgatgcactatctattaggaaactatgtatatctattataatttagattttggtttatctgatcatgctttggccaaggtgttcttgttggacattatagtaaaacaaaattgcatgactattttggattctggttcctctgatcacactatggctaagatgttcttgttggacaatagaatgaaacaaacatgcgtgtcttatcatcagaatttttctcgttctacagttttgacaccctggtctgcatctagcaggtcaaactctacagggggtctagtaagaagctgagtagatttcattcctgtagtgcaatgagtggtgcatttttgtgtcattttagtgatggtcaaatttcaaattttatctacttttgcatatttgttagtgatggccaaccgtttgatgtatgaaattttcgaatttataccagtgcagattaaacaattctgactggctactaaaatgtttatctttgaagtaaaattgcttttagagtatagacttttaaaattatgcatattattggcaaataacaaaggcaaaatgttaaaatcatgaagattgtcaattgaaaaggtatattatatttttatggccagaggtagtagttgtttatctcagcctgaattgttcatccagcatctggcccaattatccaagattcccttgtgggctgcattttcatgaatagattgatagtcctgtggcatattcgttctgcttgtctggtacgtatcccaactatagattttccagataagatcgggtttttgttcttttgctgctaagcaatctagttgaactgttcactatttttaccatcaaatttcgattatacttttctctactgatatatacttcttttttgcacctcaggttcttatgatgcgattagaatccgatctagcacaggttctgatgtctgcgtgcagaggggaactgggcgatgtttcactaacctggtcacctgaaatggcaatggtggttgtgatggcaagcgaaggataccccggatcttataagaaggggactgtaataagaaatctcgagaaggccgagcaggtctcgcccgcggtaaaaatattccatgctggaacagcactggatggggatggaaatcttgtcgctgtcggaggccgggtgctcgggatcacggctaagggcaaagacattgaggaagcacgggcaagagcatatgatgcagtagatgttgttgactggcctgaaggattcttcaggcgcgatattggttggagagcactgaagcacaagcaagtggccaattactgatgcggattttcctgagcacaccacaactatggtgagcatgtaatgttaagagcaataaagagaaaatttgtcacttctgtggttgaggaaaggcaaaaccatagctcaaatttgagtttttttttttgtaccaactgttaaatttgagttgggcttgcattttgaggaacagccagatgaacaatgaccgagttttgacttccacaagtagagagagagcattgttcggtgcttaatatctacttccgttggttagtggtattaagggattccatatgtaagtcgttttagacttgtgcacaagaattaagataacaatctcaatgattttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0191200, RefSeq:Os08g0191200