Os05g0433400

From RiceWiki
Revision as of 10:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0433400| Description = Protein of unknown function DUF1218 family protein| Version = NM_001062172.1 GI:115464074 GeneID:4338890| Length = 8...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os05g0433400

Description

Protein of unknown function DUF1218 family protein

Version

NM_001062172.1 GI:115464074 GeneID:4338890

Length

840 bp

Definition

Oryza sativa Japonica Group Os05g0433400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21247588..21248427

Sequence Coding Region

21247588..21247683,21247805..21248019,21248118..21248427

Expression

GEO Profiles:Os05g0433400

Genome Context

<gbrowseImage1> name=NC_008398:21247588..21248427 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21247588..21248427 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacaagacggtgatcgtcgtctccgccgtcgtcgggtccctggggttgctgagcgccattctgggattcgccgccgagagcacaaagatcactatttcggacgtgcgggtttccggcgacgagtgcctgtacccgcagaacccctcgctaaggctggggctctgcgccgccgtattgctgcttctggcgcaggtcaccgtgtccgccatcggcggctgcggctgctgctgcggcaacggcaagccccgcggcatcccgtcctccaagaccaaccgggtcgtcggcatcgtcttcgccgttgcctcatggatagcggcggtgatcgccgtagtgctgttcgtggagggggcggcgtggaacgccaacgtggcgagggacaccgcgccggtgtgctacttcctcaaggacggcgtcttcgcggccgcggccgtgctggccctcgccgccacggcgctcggtgtcgcctcctacgtcatgctccgcaggcagctgcccgacgacgacgacgacgcaccggcgggcgcggtcgcgtcctggaggcagccgctgctgcactccgggatcgcgatgggccacccgcagttcccgccgcatcctcaatggcattcgcaggtttag</cdnaseq>

Protein Sequence

<aaseq>MDKTVIVVSAVVGSLGLLSAILGFAAESTKITISDVRVSGDECL YPQNPSLRLGLCAAVLLLLAQVTVSAIGGCGCCCGNGKPRGIPSSKTNRVVGIVFAVA SWIAAVIAVVLFVEGAAWNANVARDTAPVCYFLKDGVFAAAAVLALAATALGVASYVM LRRQLPDDDDDAPAGAVASWRQPLLHSGIAMGHPQFPPHPQWHSQV</aaseq>

Gene Sequence

<dnaseqindica>1..96#218..432#531..840#atggacaagacggtgatcgtcgtctccgccgtcgtcgggtccctggggttgctgagcgccattctgggattcgccgccgagagcacaaagatcactgtaagcacattgccgatctctctcctggcccctgaagcgtacgttcttgcttcattggaatggatgcgccgtggcgcatatacgtggccaacaactgacagttgaacgatcgattttgcagatttcggacgtgcgggtttccggcgacgagtgcctgtacccgcagaacccctcgctaaggctggggctctgcgccgccgtattgctgcttctggcgcaggtcaccgtgtccgccatcggcggctgcggctgctgctgcggcaacggcaagccccgcggcatcccgtcctccaagaccaaccgggtcgtcggcatcgtcttcgccgttgcctcatggtgagcaaattaagcacgcagcgacgactgctttcatgcgcaacctcggtgtggtctcacgacaagtgtcgcgtgcgttcgtgcgtgcgtgcgtacaggatagcggcggtgatcgccgtagtgctgttcgtggagggggcggcgtggaacgccaacgtggcgagggacaccgcgccggtgtgctacttcctcaaggacggcgtcttcgcggccgcggccgtgctggccctcgccgccacggcgctcggtgtcgcctcctacgtcatgctccgcaggcagctgcccgacgacgacgacgacgcaccggcgggcgcggtcgcgtcctggaggcagccgctgctgcactccgggatcgcgatgggccacccgcagttcccgccgcatcctcaatggcattcgcaggtttag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0433400, RefSeq:Os05g0433400