Os08g0203700

From RiceWiki
Revision as of 20:45, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0203700

Description

Protein kinase-like domain containing protein

Version

NM_001067760.1 GI:115475256 GeneID:4344916

Length

8034 bp

Definition

Oryza sativa Japonica Group Os08g0203700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:6039533..6047566

Sequence Coding Region

6039609..6039717,6041200..6041386,6041636..6041707,6042413..6042484,6042599..6042670
,6043034..6043105,6043214..6043285,6043366..6043437,6043685..6043756
,6043839..6043910,6043998..6044072,6044162..6044233,6044335..6044400
,6044510..6044575,6044695..6044739,6044816..6044880,6044962..6045341
,6045417..6045615,6045701..6045859,6045946..6046064,6046152..6046362
,6046502..6046733,6046816..6046966,6047072..6047431

Expression

GEO Profiles:Os08g0203700

Genome Context

<gbrowseImage1> name=NC_008401:6039533..6047566 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:6039533..6047566 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagttgcagcagcagcagcgtccatggcttcttgtggctgatgctcgtttatgcgtcctgtgcagctgttcaagctcagcaagcagcgagaactgatccagcagaagtggctgcactgaacacgatcctggggagatggggcctgcgggcgtcgccggcgtggaacatcagcggcgagccctgcagcggcgtcgccatcgacgagaccggcgtcgacaacaaccccaacatcaacccggccatcaagtgcgactgctccttcaacgccggcaccgtctgccacatcatcagactgagagtgttctcgttgaacgttgttggtcaaatacctgaggagctgcagaatctctcttatctgaataacttggatcttcggcgaaattacttgacgggtcccctgccatcctttattggaaacttttctgccatgcagtacttggcggtgtccctcaatccgttatctggacctcttccgaaggagatcgggaatcttagaaatcttctatcattgggcattagttcaaacaattttactggtgaactccctgcagaactgggcaatttggaaaaactcgagcaaatgtatattattagttctggcttcagtggtcccttcccttcaacattctcaaagcttaagaatttgaagattctgtgggcatcagataatgatttaacaggaaaaatacctgattattttgggagctttccaaatttacaagatttaaggttccaaggaaattcttttcaaggtccaattccagcaagtctatcaaatctaaccagattaacaagtttgcggatcggtgatattctaaatgggagctcctcgctgtcgtttatctctaatctgacatctttgaatgtcttaatactgaggaactgcaagatatctgataatcttggaacagttaacttttctaagcttgcagggttaaccttactggacttgagctttaacaatatcacaggtcatgttcctcaatccatactgaatctggacaagcttagcttcttgtttcttgggaacaacagcctttctggaagcttgccatatgacaaaagcccttcactgaacaatttagatttttcatataaccatctctctggaagctttcctccatgggttactgggaacaatttgcaactgaatttggtggctaatgacttcattcttgatagcaccaacaatagcattttaccttcagggctaaactgtctccagcaagatactccttgtttccgtggttctccagaatattattcctttgcggtcgactgtggcagtaataaatctacaaggggatcagataatactttgtatgaaactgatgctcaaaacattggagccgcatcttattatgttagtgacaatgcgagatggggtgtaagcagtgtaggtaaattcaatgaggcttccaatggaagttatgcaatatatagcccccagcagtttcagagtgcacttaactcagaattattccaaactgcaagaatgtcaccatcatcacttagatactatggtattggacttgagaatgggaattacactgtctcacttgagttcgcagagtttgtttatccaaactcactaacttcaaatagcatcgggcggagagtttttgacatatatgttcagggtgagctgaaggaaaagaacttcaatataaggaagatggctggtggaaagtctcttattgctgtcaataagagatatactgcaactgtgtccaaaaacttccttgagatccatctgttctgggctgggaagggtacttgttgcattcctactcaaggacattatggacctacgatctcagcattaagcgtgaccccaaattttattcctactgtgcaaaatggtgttccaaaaaagaaaagtaaagcagggacaatttctggagtagtgatcggcgcttcattctttggattagcagtcctagttggattatttatgttgctaaagaagagaaggagaacgtcacaacggaaagaagaactctacaacatggttggaaggcgtaatgtcttcagcaatgcggagcttaagttagctacggagaattttggttctcaaaacattcttggagaaggaggatatggaccagtctataagggtatattaactgatggaagggtggtagctgtgaaacaactttctcaatcatcccagcaggggaaaagccagtttgtgacagaggttgcaacaatctcttctgtgcaacatcggaaccttgtgaaattatatggctgctgcattgacagtaatacaccattgttggtttatgagtacctcgaaaatggaagtctggatcaagcactcttcggggatggtaggttcaaccttggctggtcaacacgttttgaaatcattttaggcattgcaagagggctaagttatcttcatgaggaggccaatgtgcgcatcgtgcatcgggacatcaaggctagtaacatcctactcgaccctgatttaacacccaagatatctgattttgggcttgccaagctctatgatgagaagaagactcatgttaacacaaaagttgccggcacgtttggctacctggcacctgagtatgcaatgagaggccatttaactgaaaaggttgatgttttctcatttggtgtggtcgctctagagactgtcgctggtcgatcaaacaccgactactcccttgtggaagacaagaaatatctctttgaatgggcttgggggctctatgaacgagagcaagcgctcggaatcgtggacccaaggctcgaggaaatcaatgaagaggaggtcttgagagtcattcgtatgtcgttcctttgcacccaaggctcaccacaccaaagaccacctatgtcaagggtggtggcaatgctcaccggagacattccggtgagtgatgtggtggcgaagccgaactacatcattgagttgcagctcaggggaaggaatagcagccatgtcaccaccggctactccgggtctactgccgatgagctcagtgggcagagggagacatcccctctcacaccttccctagagattaacagagaaattatcgatgatggaagatga</cdnaseq>

Protein Sequence

<aaseq>MSCSSSSVHGFLWLMLVYASCAAVQAQQAARTDPAEVAALNTIL GRWGLRASPAWNISGEPCSGVAIDETGVDNNPNINPAIKCDCSFNAGTVCHIIRLRVF SLNVVGQIPEELQNLSYLNNLDLRRNYLTGPLPSFIGNFSAMQYLAVSLNPLSGPLPK EIGNLRNLLSLGISSNNFTGELPAELGNLEKLEQMYIISSGFSGPFPSTFSKLKNLKI LWASDNDLTGKIPDYFGSFPNLQDLRFQGNSFQGPIPASLSNLTRLTSLRIGDILNGS SSLSFISNLTSLNVLILRNCKISDNLGTVNFSKLAGLTLLDLSFNNITGHVPQSILNL DKLSFLFLGNNSLSGSLPYDKSPSLNNLDFSYNHLSGSFPPWVTGNNLQLNLVANDFI LDSTNNSILPSGLNCLQQDTPCFRGSPEYYSFAVDCGSNKSTRGSDNTLYETDAQNIG AASYYVSDNARWGVSSVGKFNEASNGSYAIYSPQQFQSALNSELFQTARMSPSSLRYY GIGLENGNYTVSLEFAEFVYPNSLTSNSIGRRVFDIYVQGELKEKNFNIRKMAGGKSL IAVNKRYTATVSKNFLEIHLFWAGKGTCCIPTQGHYGPTISALSVTPNFIPTVQNGVP KKKSKAGTISGVVIGASFFGLAVLVGLFMLLKKRRRTSQRKEELYNMVGRRNVFSNAE LKLATENFGSQNILGEGGYGPVYKGILTDGRVVAVKQLSQSSQQGKSQFVTEVATISS VQHRNLVKLYGCCIDSNTPLLVYEYLENGSLDQALFGDGRFNLGWSTRFEIILGIARG LSYLHEEANVRIVHRDIKASNILLDPDLTPKISDFGLAKLYDEKKTHVNTKVAGTFGY LAPEYAMRGHLTEKVDVFSFGVVALETVAGRSNTDYSLVEDKKYLFEWAWGLYEREQA LGIVDPRLEEINEEEVLRVIRMSFLCTQGSPHQRPPMSRVVAMLTGDIPVSDVVAKPN YIIELQLRGRNSSHVTTGYSGSTADELSGQRETSPLTPSLEINREIIDDGR</aaseq>

Gene Sequence

<dnaseqindica>77..185#1668..1854#2104..2175#2881..2952#3067..3138#3502..3573#3682..3753#3834..3905#4153..4224#4307..4378#4466..4540#4630..4701#4803..4868#4978..5043#5163..5207#5284..5348#5430..5809#5885..6083#6169..6327#6414..6532#6620..6830#6970..7201#7284..7434#7540..7899#tatatttcaaaacaaaccaaaccaaacctgctgcttttgctttggttaattagctgagagagaaattaagagagagatgagttgcagcagcagcagcgtccatggcttcttgtggctgatgctcgtttatgcgtcctgtgcagctgttcaagctcagcaagcagcgagaactgatccagcagaaggtatgtgaattcagttttgcaaattacatatctctattgatcttgttctacctgcaactctgcaagtggtagctagagggtgttaattcagaaactggcaggattactagtaattagcagagcttagttaattgcgtgcaaactgtgtcttgtcgcttaatttgttctccggtttcattcactaattttgaagagctagcttcaaattcaatctataatactcaaatccgaaataaaacagcatccggttagtacccaggttgtttagttcactgaacaacaggttaatgacagaagcaaatcctaaaattcagataataacttagctcctatgctttcaaaataaaaagttaggcctgtagacaacgtaagtgaaatacaagtcagaaatttaactggcaacattttcagtaaacagggatcaattatgacgcatcagaaggttaaagtctatctagacgctgaatattaaaggacggactttgatattaaaggaaggctattggaagaattaatggtgagcagcttgaagtcaaacccaattggcagcttagagatgggttgctggcatgcaccccatccgcctgagttcgattttgctcgagcatgctcacctgaaatatttgcttctttcttcttaaaaccatggacaccaattccttccttgatttccgacttatttttttttcaattggcaacctagggcccatagggtaggaaaaggtgagatgtatttgtcccacttaattaaataaatgttttatttagacaattgaaatggacttgagtgggactattttaatataaaataagtattagataattttctcatatcttctaccatatatgtgccttttgagtctaactaattagacacctaattcaatccacaattctctcctccttcaaatgacacatgaagtaccacaatgagttgtgtttgtcccacttaattaaggaaatggactcgactcatatatttcaatataaaaataagtagaaatttaactagaacggtaagatagcgagccggtaatgttaagtactccctccgttttagattatatgtcgttttgactttgatcaaagttaaactgctcaagtttgatcaagtttgtagaaaaacgtagtaacattttcaacataagataagtatattatgaaaatatatttaattgtagatttaatgaaactattttagtgttgtaagtaaacttgattaaacttaaagtagtttggttttgaccaaaatcaaacttgattaaacttaaaatagtttgattttgaccaaagtcaaaacgaattataatctaaaacggaaaacggagggagtaggtgtttacagaagtagagcgtgtggttatatggcttgagcgtgcatatgtatacgagcatctgccttggtatcttgtttagcggaaaacaaagaaaaggttttcgagctacatttgcttaaactgaattgcgtatgtgtctctccagtggctgcactgaacacgatcctggggagatggggcctgcgggcgtcgccggcgtggaacatcagcggcgagccctgcagcggcgtcgccatcgacgagaccggcgtcgacaacaaccccaacatcaacccggccatcaagtgcgactgctccttcaacgccggcaccgtctgccacatcatcagactgtacgtatcctctcaacctgcgctgatccagctgcacaccaggtgttcgatataatgcctacaagaggccatgagtgaccatggtgttgctgaggattaggcttgcacacatgaaaatgaaattgtttgatattagttccttccaatccgtctctgcaaactcctatgtttggtttgtttttttccctgaaatcacgatctttaggatccaaggagctctagctaacaggtttttgtgtgtctattcaggagagtgttctcgttgaacgttgttggtcaaatacctgaggagctgcagaatctctcttatctgaataacttgtatggcctctaaactttctcttctctgttttgaagataaagcagtaaagcactactttttctgagagctagctagtaggatgtagagaacatcgactgaggaatggcaattgagatgctcttcagctcttgagggtccttttatccaatttatgaataatcttttgagtccaacttctcatggtaaaattatgctaaaaggatatatcacttcaaagtgctaaatctggaagaaagaatcagttgtatgcgccgacaagatgggtgcacatgtcattcacacattcttggaaaaattcttaaggtgtgatctttgtgggggtagattatatataattgttctgtctgttgactgtgatttggcttcaatatagcagatattgggaaatacattatatagcagaagctataatcctataccacaatcttgatagtattaaataagtatggaacaaataccatatatatgttttacgaggacaatacacataaatattttgagaagtttgaaaataaagcttgcagaatacctatcaccataccctgttctccattgtgttactcaagcgttcagtaaaaaaatcctaataactagcgaagaactatcatcttcctcatctagaaaaactagcaagaataatcagggtacaggagcctgattatgaagtgtttatgtttagcttgatggttttgatattactgaagggatcttcggcgaaattacttgacgggtcccctgccatcctttattggaaacttttctgccatgcagtacttgtaagaatctgatttcgatcactgctttagttttattttctcttagcattcatcagttgttactttctgtttctctaatcagtaatcgcataatgttgaaaaaaaaattactagggcggtgtccctcaatccgttatctggacctcttccgaaggagatcgggaatcttagaaatcttctatcattgtaagagatatcttagttaaatttcttcagagttgaagtttacattacagactattttttctactcggagttgaagtttatactacggactatctgaagtaaattagttacacaggagacacaaatgtgtaactgtaacttattaagaattttataaaaatttatcatttctacatgagtttcttatgcttgcatcagatccaaacagtaataaatagttcttatctgctatccaaaataacaaaattgtagattcttaagcagtgttttgtaacatgcttaattcttacagaggcgaatttatgctattttctgtctgtacataaacaaaatcgtagtcaacatgtttctttgggatttcaggggcattagttcaaacaattttactggtgaactccctgcagaactgggcaatttggaaaaactcgagcaaatgtaatcccattgtccattttgagcttccaaatttagactcctgttaactaaaattttgatgaggcccatctaaagttgtttttaattactgcagtcttccttttataggtatattattagttctggcttcagtggtcccttcccttcaacattctcaaagcttaagaatttgaagattctgtaagctattggagtgtcacaaatgttattttcattttggttccatatgctcgaagtaacagattctattttgcctgcaggtgggcatcagataatgatttaacaggaaaaatacctgattattttgggagctttccaaatttacaagatttgtaagattaattatcaacctcttgctccatttaaatatttatcctgatttattataacagaaaatcaatggaactgtagcacaaaatgcttctccttcatttcttgcccttacattaggacaagaacatatcatattctcagccctagtcctaacaggagtgcaacacattgcctgagtgataaatttgtataattttaccttttgacatcatatatttatgatctaatcaaaacattaacctgtagaaggttccaaggaaattcttttcaaggtccaattccagcaagtctatcaaatctaaccagattaacaagtttgtaagtatttttacattacactgcctgtttcctccatggagatcaatataagtactttattctctaagtgtccgtgcttcaggcggatcggtgatattctaaatgggagctcctcgctgtcgtttatctctaatctgacatctttgaatgtcttgtacggtgaaaagcttttgctatagagttcataattgcttagtcttcacaaagtggcaagttactaagttagatacttttattacagaatactgaggaactgcaagatatctgataatcttggaacagttaacttttctaagcttgcagggttaaccttactgtaagtatttcttttcctgctctttacttttggtcagtttgatataaggcatctgtatcgacgatgttgctgcttccctattggcacagggacttgagctttaacaatatcacaggtcatgttcctcaatccatactgaatctggacaagcttagcttcttgtaagaaattaaaaaattctttctgaatattcctgttcctgtcatacaatggcttcggaaggtaatcttttgggggccatactgacctgtacataaaccaggtttcttgggaacaacagcctttctggaagcttgccatatgacaaaagcccttcactgaacaatttgtatgtgtagcaaattaacatttaagtgtagcacatggccacatgttactcctatatttttgaatattttgtacttggtttttttgaacttctgatggaacctttgcagagatttttcatataaccatctctctggaagctttcctccatgggttactgggaacaatttgcaactgtaagttttatgttctgaaatttcttataaacttttgaatgcaggcagaggggaaaatatacatactctaggttgtgcttacatgtttcctagcaagttaaccattttgcgttctataggaatttggtggctaatgacttcattcttgatagcaccaacaataggtatgtgtcacattaaattgtacagatgaaaacatttgtgcgcgatctgagattggtgattcaattatttgtgcagcattttaccttcagggctaaactgtctccagcaagatactccttgtttccgtggttctccagaatgtataattccaagtttccaactcttcactcacattggtagttgatatgacctcagtactattataaccatctcaattgcagattattcctttgcggtcgactgtggcagtaataaatctacaaggggatcagataatactttgtatgaaactgatgctcaaaacattggagccgcatcttattatgttagtgacaatgcgagatggggtgtaagcagtgtaggtaaattcaatgaggcttccaatggaagttatgcaatatatagcccccagcagtttcagagtgcacttaactcagaattattccaaactgcaagaatgtcaccatcatcacttagatactatggtattggacttgagaatgggaattacactgtctcacttgagttcgcagagtttgtttatccaaactcactaacttcaaatagcatcgggcggagagtttttgacatatatgttcaggttcatactgagtgtgtcacataatattttgtgcatgtctgcatggaatgttttctaactagacgttttgcatagggtgagctgaaggaaaagaacttcaatataaggaagatggctggtggaaagtctcttattgctgtcaataagagatatactgcaactgtgtccaaaaacttccttgagatccatctgttctgggctgggaagggtacttgttgcattcctactcaaggacattatggacctacgatctcagcattaagcgtgaccccaagtactgaccaattagtcaatatatatgtacaaccaagaaaagggaattccattgatttttaattaatgtaaaactcatgtttcagattttattcctactgtgcaaaatggtgttccaaaaaagaaaagtaaagcagggacaatttctggagtagtgatcggcgcttcattctttggattagcagtcctagttggattatttatgttgctaaagaagagaaggagaacgtcacaacggaaagaaggtagatattcttctagcaattcactttttaaatagatgattttaattcctaattatttccaatatgtgatggtttttttttggcagaactctacaacatggttggaaggcgtaatgtcttcagcaatgcggagcttaagttagctacggagaattttggttctcaaaacattcttggagaaggaggatatggaccagtctataaggttggttatttcccctaatttactcaatgttaattgtaagtgaatatttatctgatctagcaataaggaaagttcatcttttgatagggtatattaactgatggaagggtggtagctgtgaaacaactttctcaatcatcccagcaggggaaaagccagtttgtgacagaggttgcaacaatctcttctgtgcaacatcggaaccttgtgaaattatatggctgctgcattgacagtaatacaccattgttggtttatgagtacctcgaaaatggaagtctggatcaagcactcttcggtgagttcacatcgtatcaccatcacctatcaaattgcttatgctgcactccgttatcgagatacctggttcttaactctttatatttttcttctctttatcatcatgtcatttatcttggtcgtttttggaaatgcaggggatggtaggttcaaccttggctggtcaacacgttttgaaatcattttaggcattgcaagagggctaagttatcttcatgaggaggccaatgtgcgcatcgtgcatcgggacatcaaggctagtaacatcctactcgaccctgatttaacacccaagatatctgattttgggcttgccaagctctatgatgagaagaagactcatgttaacacaaaagttgccggcacgttgtaagcgcattcatcatggctatcatgttcgtgtatatgttaaataacctgtactgattgcacttgcttgaactttgtctagtggctacctggcacctgagtatgcaatgagaggccatttaactgaaaaggttgatgttttctcatttggtgtggtcgctctagagactgtcgctggtcgatcaaacaccgactactcccttgtggaagacaagaaatatctctttgaatgggttagctgataagaaatctttgaatcctagagaatacatcagtttatcagtttatccttttataggttactgaaacatgttcccttcgtatgttaaaccttataggcttgggggctctatgaacgagagcaagcgctcggaatcgtggacccaaggctcgaggaaatcaatgaagaggaggtcttgagagtcattcgtatgtcgttcctttgcacccaaggctcaccacaccaaagaccacctatgtcaagggtggtggcaatgctcaccggagacattccggtgagtgatgtggtggcgaagccgaactacatcattgagttgcagctcaggggaaggaatagcagccatgtcaccaccggctactccgggtctactgccgatgagctcagtgggcagagggagacatcccctctcacaccttccctagagattaacagagaaattatcgatgatggaagatgaatgcgaagttgcaaagtgatggtagtgatcttcgtttcaagagctaattttggacattattcgtgttcaaataaattgcatttttatgtgagttagagctaataaaattgaatgtgacatgtgctactattgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0203700, RefSeq:Os08g0203700