Os08g0236200
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0236200 |
|---|---|
| Description |
Reverse transcriptase, RNA-dependent DNA polymerase family protein |
| Version |
NM_001067850.2 GI:297608212 GeneID:4345015 |
| Length |
4390 bp |
| Definition |
Oryza sativa Japonica Group Os08g0236200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:8274923..8279312 |
| Sequence Coding Region |
8274923..8275063,8277038..8278168,8278552..8278835,8278938..8279075,8279132..8279312 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:8274923..8279312 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:8274923..8279312 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggtcgccaaaacaactccggcggcagcggttacggaaattcgggtggcaacttctaccaacagcagcaggccggtcttcgtcctgccggcccgtggttctgcttcaatccatgggctgcgcaggcctctacatggcgccctcccagcaatcccggcaacagtgctggcctccttggcccgatggcctccaatgccgcaagtccagcccaactgggaccaagctggtcttgttgctgctcttaatcaactatctgtgaacagtccaagtccatgggtgcttgacacaggagctacttcgcatatgtcctcgaccgacggaactactaggtttgctcttaaaaacatccttgtcgctccctccttggttcgaaacttactttctgttcgtcaatttacccgcgacaacaaatgctcaattgaatttgacgagtttggtttctttgtgaaggaccttcaaacccagcgcgtgattcttcgttgcaatagtcgtggggacctctacactctacctactgccgtccctgccatcaccgcccacagcttcctcgccgagtcatccactttatggcatcgtcgccttggtcaccccagtccagccgcaccgcggtatcgttcttcgcttgtcctgtcatacacttctccccaaaatggcaaagccgagcgtgttcttcgcacaatcaacaactccatccgcaccctacttatacaagcttccatgcctccttcctattgggccgaggctctagctactgccacatacctactcaaccggagaccttccacctctgttcgcaattctatcccataccagctcttgcataacaagcttcctgactattccaaccttcgagtctttggttgcctttgttatcccaatcttagtgccacgacacctcacaagctctcccctcgttcagcaccttgtgtctttcttggctacccggcttctcacaaggggtttcgatgcttggacatctctactcgtcgtctctatatttcccgccatgtggtttttgatgataagacgtttccctttgcggctattccccaggatgcctcgtcttttgattttcttttacagggtttctccaccgcggtagctccctcctctgaggttgagcgtccgcgattttcctcggtgactccctcccatgaggttgagcaaccgattcccgacgatgacacctcaggcaccgaacttttccagcttctgcctggacttcggtcttctgctgccggccgtcctcttgtcggcttgcctgttaacgctcgacttccgggcgggtgtgctaatggtgccgctaatggctcttcttcaagcaatccttctccggttatggatcctcctgctgcttctgtcgttcgaccagctccatctgagggaccaaatacatcgctgatttctccttatcggcacacctacgtgcgccgatcacagccggcacctgcagctattcatggcccgattcgctcctctcgagcgttccgtagtgctacagatcaacagcagcagacaggtcacaccatggtgactcgttctcagaccggccatctccgacctatccagcgtttcacttatacagccactcatgatgctgtttcgccggttccttccaactatcgcagtgccctggccgatccaaattggcgtgctgctatggctgacgagtacaaggctcttattgataataacacctggcgattggtacctcgtcctcctggtgccaatgtggttgattactttgccaggatctttccaggagtggctcatggctttgcttgcagatataacggcagcaacccgtttgctgtcagaactgctgaacaatctcttgccttaatgcttgactggtttgagaaacacttgaaatga</cdnaseq> |
| Protein Sequence |
<aaseq>MVAKTTPAAAVTEIRVATSTNSSRPVFVLPARGSASIHGLRRPL HGALPAIPATVLASLARWPPMPQVQPNWDQAGLVAALNQLSVNSPSPWVLDTGATSHM SSTDGTTRFALKNILVAPSLVRNLLSVRQFTRDNKCSIEFDEFGFFVKDLQTQRVILR CNSRGDLYTLPTAVPAITAHSFLAESSTLWHRRLGHPSPAAPRYRSSLVLSYTSPQNG KAERVLRTINNSIRTLLIQASMPPSYWAEALATATYLLNRRPSTSVRNSIPYQLLHNK LPDYSNLRVFGCLCYPNLSATTPHKLSPRSAPCVFLGYPASHKGFRCLDISTRRLYIS RHVVFDDKTFPFAAIPQDASSFDFLLQGFSTAVAPSSEVERPRFSSVTPSHEVEQPIP DDDTSGTELFQLLPGLRSSAAGRPLVGLPVNARLPGGCANGAANGSSSSNPSPVMDPP AASVVRPAPSEGPNTSLISPYRHTYVRRSQPAPAAIHGPIRSSRAFRSATDQQQQTGH TMVTRSQTGHLRPIQRFTYTATHDAVSPVPSNYRSALADPNWRAAMADEYKALIDNNT WRLVPRPPGANVVDYFARIFPGVAHGFACRYNGSNPFAVRTAEQSLALMLDWFEKHLK </aaseq> |
| Gene Sequence |
<dnaseqindica>4250..4390#1145..2275#478..761#238..375#1..181#atggtcgccaaaacaactccggcggcagcggttacggaaattcgggtggcaacttctaccaacagcagcaggccggtcttcgtcctgccggcccgtggttctgcttcaatccatgggctgcgcaggcctctacatggcgccctcccagcaatcccggcaacagtgctggcctccttggcccgtatcctcaagctcacacagcttttgccggttcctatgtgtctccaccaactccaggatggcctccaatgccgcaagtccagcccaactgggaccaagctggtcttgttgctgctcttaatcaactatctgtgaacagtccaagtccatgggtgcttgacacaggagctacttcgcatatgtcctcgaccgacggtattctcgttacacgcctccctaactctcatacctttattaccattggtaatggtcatactattccggttatatgtcgtggtacttcttttctacctataggaactactaggtttgctcttaaaaacatccttgtcgctccctccttggttcgaaacttactttctgttcgtcaatttacccgcgacaacaaatgctcaattgaatttgacgagtttggtttctttgtgaaggaccttcaaacccagcgcgtgattcttcgttgcaatagtcgtggggacctctacactctacctactgccgtccctgccatcaccgcccacagcttcctcgccgagtcatccactttatggcatcgtcgccttggtcaccccagtccagccgcagtacaaactcttcataaattagctattctttcttgtactaggtctaataataagctttgtcatgcgtgtcagttaggaaaacacacgcgtcttcctttttctaggtctttgtctagtacttcttccccttttgagcttgttcattgcgatgtatggacctctccagttttgagtttgtctggttttaaatactatctagtggtgcttgatgatttcactcacttttgttggacttttcctcttcgtcataagtccgatgttcaccagcatctcgtcgagtttgttgcctatgtcaagacccagttcagcctacccattaaatgctttcaggccgataacggtaccgagtttgttaatcatgccacctcttctttttttgctagccgcggtatcgttcttcgcttgtcctgtcatacacttctccccaaaatggcaaagccgagcgtgttcttcgcacaatcaacaactccatccgcaccctacttatacaagcttccatgcctccttcctattgggccgaggctctagctactgccacatacctactcaaccggagaccttccacctctgttcgcaattctatcccataccagctcttgcataacaagcttcctgactattccaaccttcgagtctttggttgcctttgttatcccaatcttagtgccacgacacctcacaagctctcccctcgttcagcaccttgtgtctttcttggctacccggcttctcacaaggggtttcgatgcttggacatctctactcgtcgtctctatatttcccgccatgtggtttttgatgataagacgtttccctttgcggctattccccaggatgcctcgtcttttgattttcttttacagggtttctccaccgcggtagctccctcctctgaggttgagcgtccgcgattttcctcggtgactccctcccatgaggttgagcaaccgattcccgacgatgacacctcaggcaccgaacttttccagcttctgcctggacttcggtcttctgctgccggccgtcctcttgtcggcttgcctgttaacgctcgacttccgggcgggtgtgctaatggtgccgctaatggctcttcttcaagcaatccttctccggttatggatcctcctgctgcttctgtcgttcgaccagctccatctgagggaccaaatacatcgctgatttctccttatcggcacacctacgtgcgccgatcacagccggcacctgcagctattcatggcccgattcgctcctctcgagcgttccgtagtgctacagatcaacagcagcagacaggtcacaccatggtgactcgttctcagaccggccatctccgacctatccagcgtttcacttatacagccactcatgatgctgtttcgccggttccttccaactatcgcagtgccctggccgatccaaattggcgtgctgctatggctgacgagtacaaggctcttattgataataacacctggcgattggtacctcgtcctcctggtgccaatgtggttacaggaaaatggattttcaaacataagtttcattctgatggaactcttgctcgtcacaaggcacggtaggttgttcgcggctattctcaacagcatgggattgactatgatgagactttcagtccggttgttaagcctgctacgattcgtgttgttctcagtattgcagcatctcgttcttggcctatacatcagctggatgtcaagaatgcttctccatggcaacctcgaggagactgtgtattgtcaacaaccatctggatttgtagatccctctgcacctaatgctgtttgtttgctccagaagtcgctatatggattgaagcaggctcctcgtgcatggtaccagcggtttgcgacatatattcgtcagttgggtttcacatcctcagcttcggacacttctctctttgtttacaaagatggagacaatatcgcatatttgctgctgtatgttgatgacatcattctcacagcttcgtctgctactctacttcatcatattactgctcgtcttcactcggaatttgccatgacagatcttggtgacttacattttttcctgggtatttctgtcacacgatcttctgatggtttattcctttctcagcgacagtatgcagttgatttattgaagcgagctggtatgtctgaatgtcattctactgcgacaccaattgatgctcggtctaaattgtctgctacagatggtgctcctgtttctgatcctacagaatataggagtcttgctggtgctcttcagtatcttactctgactcgccctgagctcacttatgctgttcaacaggtgtgtctattcatgcacgatcctcgtgagcctcatcttgctcttatcaaaaggattttgcgttatattaagggcacacttcacattggtcttcaccttagaactacaccagttaactctctgacagcttactctgatgctgattgggctggatgtcctgattctcgtcgctccacatcaggatattgtgttttcctcggcgacaacttggtctcatggtcatctaagcgtcaaactacagtttcgcgttctagtgctgaggctgaataccgagctgtagcacatgccgttgctgagtgttgttggttacgacaacttctttccgaacttcatatttcgcttacttcggctaccgttgtttattgcgacaatgttagtgctgtctacatgactgcaaatccggttcatcatcgccgaacaaagcatattgaaattgatattcatttcgttcgagaaaaggttgctttgggacaggttcgtgttttacacgttccttcctctcatcagtttgctgatattatgaccaaaggcttaccagttcagttatttactgagtttcggtccagtctttgcgtccgtgataatcccgcttcgactgtgggtgggtattagaattagattagatttgtatagtctaagtatctctcgtatatgtatatatctcttatttaagagtttgttgtaatctctattgtatttggctatataaatataatcgccccccccacgttgggttgtgtggcgtctcataattttctacaggcaattctggatctagctaattagtaacattagagcaggtacaagtacaatagcaggctaagccagctttaagtatattttaaaaagataaatgaagagagaagagcagcgggctacaaatctgtagccagctgcagcacggactccaagacgtaacgagtgtatgacaggtgggaccagatattaatagtatagtaagtaattattgtatgaattaactattacattggctataaatgatttggagctagtagtaggctatactattaaacttgctcttaatgaaaagtccaaacactagcacaaataaaaaagtttacaattgtttcttaaacacaaccactctttaaaaaaagaaacaagttatgaagagcctcttatggtttgcatctttgttgcaggttgattactttgccaggatctttccaggagtggctcatggctttgcttgcagatataacggcagcaacccgtttgctgtcagaactgctgaacaatctcttgccttaatgcttgactggtttgagaaacacttgaaatga</dnaseqindica> |
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