Os08g0267800

From RiceWiki
Revision as of 20:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0267800

Description

Cyclin-like F-box domain containing protein

Version

NM_001067943.1 GI:115475622 GeneID:4345126

Length

2802 bp

Definition

Oryza sativa Japonica Group Os08g0267800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:10216771..10219572

Sequence Coding Region

10217034..10217417,10217512..10217661,10218570..10219427

Expression

GEO Profiles:Os08g0267800

Genome Context

<gbrowseImage1> name=NC_008401:10216771..10219572 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:10216771..10219572 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacctcgggttcctcctcctccccctcctccccgtcctcccccaagcgccagcgagtggcgccgccgccgccgcggcgcacggacatgctgatggcgctcccgccggacatcctcgacgaccgcatcctcgcgctgctccccttcgacaagctggtccgcacctcctgtctctcccgcgcgtggcgccgccgctgggagtcggtcagaaacctcgagatcgagctgccccgtgcctactccggcggcggccgcgccctgtggcggtgcgcgcggcccgtccgcttcttcagcgcccgcgtcgcccgccgcgacgtcttccgcgccgcccgctggctccgcgccttggcgcggaagggcgtccaggatctaagtctggagttctcgttagccggtaagcagcgcccccttcccggacccgccctcttctcctgcgccgcactcgtccaactcgacctcgagcaatgcgacatgccggcggcgccgccgggctttctgggcttccccaaccttgagcgcctcgacctcgtgtatgtcaccctcccgttcgccggtgccggcacgcagctcgaacacctcatcgtcgcggcggagaaactcgccgtgctaaatttgtcacccgtgatcaccatcaacggcggcggcgtggacacgtgggccatcagagcgcccaaactccggaagctctacatcaccatggagatgggtgacgacaacggctgccgaataccaatgccgctccccatgctggaggaggtgaccatctcattcgatcgcctcttcggaacccaagacttcctcgatgctttccagaatatttctactgtcaataagctctttttcaagagtgataagttcaacattaatatgctggagggaattacatgcaagtttgagaatctgagggagggcggcctgatcatagattttggccagcgctcaagtgttctatcgttagtttctttactgaagtttgccccgcacattgaacacctttatattaggactgatcattccatattggaccccgtgagttctgaagatgagatggatgaagactccctgaattctgaagatgagtttgatgaagactccctgaattctcaagatgagattgatgaagactccctgaattctgagataagcagcgacttgcttgcaagcctcaaatatgtgaccctgattaatatgaagtacaactcaaatcaaatgtgctttatgaagcttttactgtccaaagcgagatctcttcaaacatttgacgtcactttcgtctacagttatgaaagcaatggacgctatggaaatgcatgcagagaattaacggagtgccaaaaggcttcaccccaagttgtgttgacagcaaaagtgacaacacacggcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MATSGSSSSPSSPSSPKRQRVAPPPPRRTDMLMALPPDILDDRI LALLPFDKLVRTSCLSRAWRRRWESVRNLEIELPRAYSGGGRALWRCARPVRFFSARV ARRDVFRAARWLRALARKGVQDLSLEFSLAGKQRPLPGPALFSCAALVQLDLEQCDMP AAPPGFLGFPNLERLDLVYVTLPFAGAGTQLEHLIVAAEKLAVLNLSPVITINGGGVD TWAIRAPKLRKLYITMEMGDDNGCRIPMPLPMLEEVTISFDRLFGTQDFLDAFQNIST VNKLFFKSDKFNINMLEGITCKFENLREGGLIIDFGQRSSVLSLVSLLKFAPHIEHLY IRTDHSILDPVSSEDEMDEDSLNSEDEFDEDSLNSQDEIDEDSLNSEISSDLLASLKY VTLINMKYNSNQMCFMKLLLSKARSLQTFDVTFVYSYESNGRYGNACRELTECQKASP QVVLTAKVTTHGM</aaseq>

Gene Sequence

<dnaseqindica>2156..2539#1912..2061#146..1003#acccgcaccccacgaggccgaggcggcgtggtatggctccttcgctttccaaacaaccctataaatatcttgcagaaggttccagaagaaggccgttggatcatagcgtcgtcagcaagccacctccacctccacctccaaaacaatggcgacctcgggttcctcctcctccccctcctccccgtcctcccccaagcgccagcgagtggcgccgccgccgccgcggcgcacggacatgctgatggcgctcccgccggacatcctcgacgaccgcatcctcgcgctgctccccttcgacaagctggtccgcacctcctgtctctcccgcgcgtggcgccgccgctgggagtcggtcagaaacctcgagatcgagctgccccgtgcctactccggcggcggccgcgccctgtggcggtgcgcgcggcccgtccgcttcttcagcgcccgcgtcgcccgccgcgacgtcttccgcgccgcccgctggctccgcgccttggcgcggaagggcgtccaggatctaagtctggagttctcgttagccggtaagcagcgcccccttcccggacccgccctcttctcctgcgccgcactcgtccaactcgacctcgagcaatgcgacatgccggcggcgccgccgggctttctgggcttccccaaccttgagcgcctcgacctcgtgtatgtcaccctcccgttcgccggtgccggcacgcagctcgaacacctcatcgtcgcggcggagaaactcgccgtgctaaatttgtcacccgtgatcaccatcaacggcggcggcgtggacacgtgggccatcagagcgcccaaactccggaagctctacatcaccatggagatgggtgacgacaacggctgccgaataccaatgccgctccccatgctggaggaggtgaccatctcattcgatcgcctcttcggaacccaagacttcctcgatgctttccagaatatttctactgtcaataagctctttttcaagagtgataaggtacgacgtcaaaccatttgaatacctcgttggatcccaattttcattacatgcctatcttgcttgcctcattgtctgcttgtgaatcccatgtagcatgttcatccacatttatgaattttagttagctcatttggacaaataatttgcagatttgattgggagtactgctgatccatttatgtctgctatatatgtgtcatcttctgcatttttgctgagtttcaatcactaagactgcaactgctattgtaactcaagagtcattaacctgaactgattatttccagaacttgttaagagagatattcatcatgatctgactcagggtgatctctctcctaaaatttggttgtgatagttgttggaggataattcttttactgcttctagtttcccttgattcctcagattaaagctgttggaatgatcaaacttgtgtttcgatcgatagtagtttttttttactgaattggtccttgtgagaaacttaattacaatttgactgaattgttcaatgtgagactaggagcttgtaccgatggtatgtcatgtttagtcaattaaatagctatatagtagtttactcacggaatgggcctaaaccatgtaatggttgatcgaaggatgaagggtgtggattaaagcaatggcaaactctgcctttggcctcaaaggcagatgatgcgaacctgtcatgtttcggcctcaaagagatgtactctgatacaaacgctaactttcctaacaatatggctcttatcttttctcaaaaggaagcttcaagaacctttctaactacaagatcatggtgtcctaatatttgaatatttgcttaggttagtaggtctatgtaaacttgaatcatggacatatgtcaggcctaactatgttcttatgattttcagttcaacattaatatgctggagggaattacatgcaagtttgagaatctgagggagggcggcctgatcatagattttggccagcgctcaagtgttctatcgttagtttctttactgaagtttgccccgcacattgaacacctttatattagggtaatattagattcacaccttcaagtgatatgttacagtttaaaggcatctcttggtcaattgtattaattgaaatttcggccttgttttgtagactgatcattccatattggaccccgtgagttctgaagatgagatggatgaagactccctgaattctgaagatgagtttgatgaagactccctgaattctcaagatgagattgatgaagactccctgaattctgagataagcagcgacttgcttgcaagcctcaaatatgtgaccctgattaatatgaagtacaactcaaatcaaatgtgctttatgaagcttttactgtccaaagcgagatctcttcaaacatttgacgtcactttcgtctacagttatgaaagcaatggacgctatggaaatgcatgcagagaattaacggagtgccaaaaggcttcaccccaagttgtgttgacagcaaaagtgacaacacacggcatgtaagacagacatcctgtccttgttgatgttgccttcgtattatgggagaaatacttcggaacttgctactgttcagattctagatgaggctgttcttgggcaaccagctgcttgttttccttcttgagaaggcagagagttgtacatagagaagctagtcgatggagtatcaggcttgtttgtgaaacactacgattactcgagatgtatacactgatatagcatgtggcggtattattgaatgacagactgatttagtatgatac</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0267800, RefSeq:Os08g0267800