Os08g0290100
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0290100 |
|---|---|
| Description |
Pentatricopeptide repeat containing protein |
| Version |
NM_001067996.1 GI:115475729 GeneID:4345184 |
| Length |
5226 bp |
| Definition |
Oryza sativa Japonica Group Os08g0290100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:11646491..11651716 |
| Sequence Coding Region |
11646601..11646815,11647381..11647432,11648158..11648358,11648709..11648785,11648986..11649058 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:11646491..11651716 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:11646491..11651716 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacgccggcgacacatccgccgccgccgctgtagcccctaccccggcgcggctgcgggaagcgctcgccgccctctccaaggcgttcgagtccggggattgctccgatggatccgccgcggcggccgtctccgacctcctcaacgccgccgccgatgcagctgatgcggaggccgacgccgaagacgaggcggcggccggggtcgtcgaggagatgctccgggaggtgcacgcgttcctctcgtccccgtcctcgaatcagttggccatagatgctctctcactagagctggtaaaacctgtggcgaagctgggggcactgatgaggaattgctgggacattgccaacgctatcattgaattcttcgtgtcaaactgcaacccgagggacatgctctccatcctatgtgaggcagtagatgcaccattggcatcaaatggctcagtgtactttgttcttctattcaaggagctagccaaagtgcttgttttgattcagaggaggcatactgagcaagtaaaagtcacacttcctgctgtccttcgagttatgaatgctgttataccagaatgtgacgaggaacatggaaagatcatcgttgatatgtacaatgcagcacttagaattggcaatgccattcaagaaatgtgcaaaaaaatggtaaaccagacgaatgaagaactctgttctgtacttagtctatactcccttcagaacatagctcttgtatcaagatgcaaacaacagcatattctctctgcttgtggttcagttgttcttcagcattcaaaaattctgacattttgtgggttcacttatttgggtcttttgactggtaatgatgtcacctcagccaccgataagatttcaaaagatgaagatgcggatttgctcgagtgcttttcttttgcaatgaatggtgcaaatcttgcagttatctggacctatatggatgatgaaatctcaaaatatgctggcgctgagctggaatcagcgctgaaagatgttaagggcaaccatacgaggatgtggcaagcaattaacattcttagatatgtgttgtcttcaactcattacccatgggtaataaaatcccacagtttggacttactgctgactatagctaatgaaagtcgtattgaggaaatcaatgatcatgtagatgtttcatcttctggtcctcaaatttttgcaacactcaaggccattgaaagtgtcatgatttccgccccagatgcattaatgcggaagaaagcttttgctactttgaaacaggttatttcaatggtgccatcctctcagagattcaacatcttacaggctcttataaagaacagcatcttcccttcattgactgcacttctcctagatctggtgaaggatgaagtttcgagagagattcgtcgagctgatcaggatattgttgaatcggatcaattacaagatggtggcgaatggccaccaccttggttttctcatgcacttgagttggtggagctgatcttgaagcctccagaaggtggccctccttgtcttcctgatcatggtgaacaggtattatcagctttgaatttgctgcgatttgttctgataatagattcaagaggatcaagatcaagaaaaatgtttggggaagagactatgaggaaggtgtactcagagtggctgatgccattaagaccaattgttgcaggaattcaatcagaaagtgaagaggatggtagcgacgttgcaaatcatatcatgtgctcgttaaatcctgttcaattagtattgtaccgctgcattgagctggcagaggaaaagatgaaaggtttctaa</cdnaseq> |
| Protein Sequence |
<aaseq>MDAGDTSAAAAVAPTPARLREALAALSKAFESGDCSDGSAAAAV SDLLNAAADAADAEADAEDEAAAGVVEEMLREVHAFLSSPSSNQLAIDALSLELVKPV AKLGALMRNCWDIANAIIEFFVSNCNPRDMLSILCEAVDAPLASNGSVYFVLLFKELA KVLVLIQRRHTEQVKVTLPAVLRVMNAVIPECDEEHGKIIVDMYNAALRIGNAIQEMC KKMVNQTNEELCSVLSLYSLQNIALVSRCKQQHILSACGSVVLQHSKILTFCGFTYLG LLTGNDVTSATDKISKDEDADLLECFSFAMNGANLAVIWTYMDDEISKYAGAELESAL KDVKGNHTRMWQAINILRYVLSSTHYPWVIKSHSLDLLLTIANESRIEEINDHVDVSS SGPQIFATLKAIESVMISAPDALMRKKAFATLKQVISMVPSSQRFNILQALIKNSIFP SLTALLLDLVKDEVSREIRRADQDIVESDQLQDGGEWPPPWFSHALELVELILKPPEG GPPCLPDHGEQVLSALNLLRFVLIIDSRGSRSRKMFGEETMRKVYSEWLMPLRPIVAG IQSESEEDGSDVANHIMCSLNPVQLVLYRCIELAEEKMKGF</aaseq> |
| Gene Sequence |
<dnaseqindica>4902..5116#4285..4336#3359..3559#2932..3008#2659..2731#2315..2583#2170..2229#1923..2076#1760..1819#1468..1646#1151..1220#483..632#183..362#21..104#cacgcctccgccgccgctccatggacgccggcgacacatccgccgccgccgctgtagcccctaccccggcgcggctgcgggaagcgctcgccgccctctccaaggtaatcgcgcaagctgagccctaggatctccttctgccgtgtaccctagctaaaccctaggatctccttctgctccaggcgttcgagtccggggattgctccgatggatccgccgcggcggccgtctccgacctcctcaacgccgccgccgatgcagctgatgcggaggccgacgccgaagacgaggcggcggccggggtcgtcgaggagatgctccgggaggtgcacgcgttcctctcgtccccgtcctcgaatcaggttcgatatcctgtgcttgcgtgtgattggtctctccgcgtggtgtttcatgttgcgattcgcggggtgggacgggagtaattttggtgatctcctgacattgttgccgtctcgtaatagttggccatagatgctctctcactagagctggtaaaacctgtggcgaagctgggggcactgatgaggaattgctgggacattgccaacgctatcattgaattcttcgtgtcaaactgcaacccgagggacatgctctccatcctatgtgaggtcagtcacgcgtgcgtttattcttgataaatcctggcatttggctttacagttgcgtcttgcaatgttgatgaaattcagaatatagacccatacagaggtaacctgtgtctcctttaactctgaaagatcctgtgattggaaagagttctggtttttattttattgagggatgaaggaaaaagtccatttacaagactgaactatcatcaaaatctgaaattcaactcggaactttgaaatgtgacactattctttaccctttcaaatagatctggataagttttatagttttttaaatatgaactgatgttccattgtttatttgttgcatccagtccaaacttgcacaatgccagggcactggaatgtccattcataattgagcatattttcattttgcattcaatatttccagacgacaatatatctctacctccttccctcgcttctgctctctgggttcctatggtatattgctcacctttttgtcatgacattatgttgctttaatacaggcagtagatgcaccattggcatcaaatggctcagtgtactttgttcttctattcaaggagctagccaaaggtatatgtttttatatgaagatttccacagccatctctctgctcatcgtttggaaattttggtttctaatggatgaatttccagataggaattgagatacttaatgctctatgcctatatatatataagtttagatatattcgcttgacatatgttacacaccttgtgtgaatattaactggttaacatttgtattattaaatatgttttttttctattcttcctagctaattgtgctttgggctagtgcttgttttgattcagaggaggcatactgagcaagtaaaagtcacacttcctgctgtccttcgagttatgaatgctgttataccagaatgtgacgaggaacatggaaagatcatcgttgatatgtacaatgcagcacttagaattggcaatgccattcaagaaatgtgcaaaaaaatggtttgttgagttaaaatgccattcaagttgaccctgtgtcctaaacaatatgcggtcgccttttcatttgtcttttctgattaattttgcattattgtttccatcaccaaaaggtaaaccagacgaatgaagaactctgttctgtacttagtctatactcccttcagaacatagtaagtacaaaactgtgttatttatatatgttattttcaattagatttagaaagatttattttcttaatatgttattaattattatacactcctatcttgcaggctcttgtatcaagatgcaaacaacagcatattctctctgcttgtggttcagttgttcttcagcattcaaaaattctgacattttgtgggttcacttatttgggtcttttgactggtaatgatgtcacctcagccaccgataagatttcaaaaggtgtttaacttttccaaattatttttcacttggaaatattgtattctgtttgcttgattgtcaactgatgcatttgtttgcaaagtgatgtagatgaagatgcggatttgctcgagtgcttttcttttgcaatgaatggtgcaaatcttgcaggtttgatgatcattttgactacactttcattggacaatgcatgttgtttagataccacttggtcacatgcttgagctttttgcagttatctggacctatatggatgatgaaatctcaaaatatgctggcgctgagctggaatcagcgctgaaagatgttaagggcaaccatacgaggatgtggcaagcaattaacattcttagatatgtgttgtcttcaactcattacccatgggtaataaaatcccacagtttggacttactgctgactatagctaatgaaagtcgtattgaggaaatcaatgatcatgtagatgtttcatcttctggtcctcaaatttttgcaacactcaaggtaatgttacgctttacttatatatttaaaaatatgtcccaatctactatatcaacaatttaagaacattcacaggccattgaaagtgtcatgatttccgccccagatgcattaatgcggaagaaagcttttgctactttgaaacaggcaagtatcatatatactgttgggttttttctttctctttgttttaacaattgtcatgaatatatttttgacttgtgtttgtatatgtctgtaagataatatgggcaggatggtaacatgttccttcttcagtctgtactgtggcatttcttctttttcattttgaatgtcacttctttataacgctgaaattttatcaggttatttcaatggtgccatcctctcagagattcaacatcttacaggctcttataaagaacagcatcttcccttcattggtaagaactaagaacacaatctctgcatgcagtttaaatggtattctctctatcccaaaatatagcaaccaagtactagattagatgtctcgtagcactagtggtgtctaatcttgtactaggttgctatattttgggacggatggagcaagtaagagcatcctgttgatgcccaatatacatatagggaaagaaaggaccatacaatggatctcagattttcagttaccgccacctaacattttctggtgtatgatgtgcttggattgatagaaacatgcagttttatgatttttaacttcatttttcaactccatcctttaaatcgtgaattatgttttttcttctagactgcacttctcctagatctggtgaaggatgaagtttcgagagagattcgtcgagctgatcaggatattgttgaatcggatcaattacaagatggtggcgaatggccaccaccttggttttctcatgcacttgagttggtggagctgatcttgaagcctccagaaggtggccctccttgtcttcctgatcatggtgaacaggtaccctctttttatgtcactactcatgaggagcataaatatctgttggaagaactcaggcaacagcaacatagatggaatagcattagttgatacaagatgcctgtttccgtattaaaataaaaggaggatgactgttgggcaggaatagatctagataagacagacatgaacttggagacttgtctaaatccacagaaggacgtcaaggactaggagagttctgttcatctttaccttattaaatctcagtgaaccagctgtgtcatcttaggctcttgagaaattagcgaatgattataacaaatggcttcaatacttataaagatactcttaacaactgaataaaatatagaataattaaagtctcaactccaatccaaaacattgaatatcgatctatcatttttcctttttcttttcgacttaatttgtcagactctcgtaatctcatttttgtaacttttaacattgaatgaatttatactagtaaattgagatgagaaatgcatgtaaattttgtgggaatatttcatgttaaatttgatgtataaatcaaagctggattgcgtgaatatctggattcaccttatatgttgcccacttgtgttgtgcttcgttattcttatgtgtcctgctaaagtggtaattttgttttacatcattttatggcttatgcctagaaaataatctgccatggttcacttttttttatttgtatgcaggtattatcagctttgaatttgctgcgatttgttctgataatagattcaagaggtaatctacaaaaaacctgtgcttaaaattatatgtacttaactgaactgtaacaataattgcatggatttgctattgcaaaactaatgctacatgatcacaccatctataagactataatctgcaagtttctctgtggctctcgaagcttaatgttttcataaattaaatatttgattaaacataattttggttatcaacgtgctggtgcatggttctaatgttcatttatctaaccaatagttgtctaaaacactttcttctttttcattcttccaaatgtcctttaataaagagctgtaacattgaaactctgttaatgtgaacctatatagtgtactaatcccaagtaatgtgttgaaaaaattgcatatgtcctttttagtttccaagcttgtaaacccatagaatcaaagatggctcgagacataaaaagaagtggttgcatcttatttgaacaaaagatgcatggtgttcgacttcatgaatggattaaggctcatgtgatttagtcctgggattaatgtgaatcgtcagtttgatatatttttcccattttgtccaggatcaagatcaagaaaaatgtttggggaagagactatgaggaaggtgtactcagagtggctgatgccattaagaccaattgttgcaggaattcaatcagaaagtgaagaggatggtagcgacgttgcaaatcatatcatgtgctcgttaaatcctgttcaattagtattgtaccgctgcattgagctggcagaggaaaagatgaaaggtttctaacgttttcagttcactggtttttgtacaatatactgctgtctcgaggcaaaacatgaacaagttgtgaatattatcccaatgatttgaagttgcgtttttttatgttgtac</dnaseqindica> 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| External Link(s) |
