Os05g0439300

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0439300| Description = Protein prenyltransferase domain containing protein| Version = NM_001187518.1 GI:297724166 GeneID:9268630| Length = ...")
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Gene Name

Os05g0439300

Description

Protein prenyltransferase domain containing protein

Version

NM_001187518.1 GI:297724166 GeneID:9268630

Length

1820 bp

Definition

Oryza sativa Japonica Group Os05g0439300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21524873..21526692

Sequence Coding Region

21524932..21526587

Expression

GEO Profiles:Os05g0439300

Genome Context

<gbrowseImage1> name=NC_008398:21524873..21526692 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21524873..21526692 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgccgccgccgtcttccagcgcgccttggcagctggaggacgcggtcatggcgaggctccgcgcctgcgtgacgttccgggacctcctccgcgtccacgggcacgtcgtgcggctccgcatctcgcaaagcagctacctcgccacccagatcgtccatctctgcaacgcccaccgccgcgtcacccacgccgcgcgggtgttcgcccaggtgcgcgacccaaacctccacctccacaacgccatgatcaaggcgtacgcccagaaccaccagcaccgcgacgccgtcgcggtctacatccgcatgctcaggtgccccacgtcccctccggatggtcacgccggcggcgaccggttcacgtacccgttcctgctcaaggcctgtggcggaacggcggcgcttgagctgggaaagcaggtgcacacgcacgtggtgagatccgggtgcgactccagtgccatcgttcagaactccctgatcgagatgtacacgcgagccggcgacctggcgctcgcgcacaaggtgttcgatgaaatgcgggaaagggacgtggtttcctggaacatgcttatatcggcacacgcgcggctgggccagatgaggaaagcaacagcattgttcaactccatgcctgacaagacaattgttacatggacggcgatggtttctgggtacacgacggtcggggactacccgggcgccgtcgacgcgttcaggtcgatgcaaacggaaggcttcgagccggacgacgtgagcatcgtcgcggtgttgccggcatgtgcccagctgggagctctggagctaggcagatggatatacgcctactgcaaaaggcacggcatgctgacaagtacacacatctgcaatgcgctaatggagatgtacgccaagtgcgggtgcatcgaccaagcgctgcagctgttcgacggcatggccgacaaggacgtcatctcgtggagcacggtgatcggcggcctcgcggcgcacgggagagcgcacgaggccgtctggctgttcaccgagatggagaaggaaggaaaggtgaggcctaatgtcatcaccttcgtcgggctcttgtcagcctgctcctacgccgggctcgtcgacgaagggctgagccacttcgaccggatgaacgacgtctacggcgtcgagcccggcgtcgagcactacggctgcgtcgtcgacctcctcggccggtcgggacaaatccggcgcgcgctggacttggtgcgcgacatgccggtgcccgccgacgcgaaggtctggggctcgttgctcagcgcgtgccggagccacggcgacgtcgacacggccgtgctggccgccgagaggctggtcgagctggagccggacgacgtgggcaacctcgtcatgctggccaacgtgtacgccgcggcgaggcggtggagcgacgtggcgagcacgaggaaggcgatacggagcaggagcatgaggaagacgccggggtgcagcctgatcgaggtgggcaacgtggtgagggagttcgtcgccggagagggtctgagctctgaacttggaggccttgctggcgttttggacatcttggcctctcaccttgcagacgacgaggaggatatagatttcgctgattcggattgtacggtttatgcaaatctggcaaacgattga</cdnaseq>

Protein Sequence

<aaseq>MPPPPSSSAPWQLEDAVMARLRACVTFRDLLRVHGHVVRLRISQ SSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIR MLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSL IEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVT WTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAY CKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMADKDVISWSTVIGGLAAHGRAH EAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHY GCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVEL EPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSLIEVGNVVREFVAGE GLSSELGGLAGVLDILASHLADDEEDIDFADSDCTVYANLAND</aaseq>

Gene Sequence

<dnaseqindica>106..1761#tttgatgttaagacggtcaagtctctgacctcccgcggaagcacaccaaccgcttgccgaacgtaccacacagccaattcatcgaacaccttgtctgctaacaccatgccgccgccgccgtcttccagcgcgccttggcagctggaggacgcggtcatggcgaggctccgcgcctgcgtgacgttccgggacctcctccgcgtccacgggcacgtcgtgcggctccgcatctcgcaaagcagctacctcgccacccagatcgtccatctctgcaacgcccaccgccgcgtcacccacgccgcgcgggtgttcgcccaggtgcgcgacccaaacctccacctccacaacgccatgatcaaggcgtacgcccagaaccaccagcaccgcgacgccgtcgcggtctacatccgcatgctcaggtgccccacgtcccctccggatggtcacgccggcggcgaccggttcacgtacccgttcctgctcaaggcctgtggcggaacggcggcgcttgagctgggaaagcaggtgcacacgcacgtggtgagatccgggtgcgactccagtgccatcgttcagaactccctgatcgagatgtacacgcgagccggcgacctggcgctcgcgcacaaggtgttcgatgaaatgcgggaaagggacgtggtttcctggaacatgcttatatcggcacacgcgcggctgggccagatgaggaaagcaacagcattgttcaactccatgcctgacaagacaattgttacatggacggcgatggtttctgggtacacgacggtcggggactacccgggcgccgtcgacgcgttcaggtcgatgcaaacggaaggcttcgagccggacgacgtgagcatcgtcgcggtgttgccggcatgtgcccagctgggagctctggagctaggcagatggatatacgcctactgcaaaaggcacggcatgctgacaagtacacacatctgcaatgcgctaatggagatgtacgccaagtgcgggtgcatcgaccaagcgctgcagctgttcgacggcatggccgacaaggacgtcatctcgtggagcacggtgatcggcggcctcgcggcgcacgggagagcgcacgaggccgtctggctgttcaccgagatggagaaggaaggaaaggtgaggcctaatgtcatcaccttcgtcgggctcttgtcagcctgctcctacgccgggctcgtcgacgaagggctgagccacttcgaccggatgaacgacgtctacggcgtcgagcccggcgtcgagcactacggctgcgtcgtcgacctcctcggccggtcgggacaaatccggcgcgcgctggacttggtgcgcgacatgccggtgcccgccgacgcgaaggtctggggctcgttgctcagcgcgtgccggagccacggcgacgtcgacacggccgtgctggccgccgagaggctggtcgagctggagccggacgacgtgggcaacctcgtcatgctggccaacgtgtacgccgcggcgaggcggtggagcgacgtggcgagcacgaggaaggcgatacggagcaggagcatgaggaagacgccggggtgcagcctgatcgaggtgggcaacgtggtgagggagttcgtcgccggagagggtctgagctctgaacttggaggccttgctggcgttttggacatcttggcctctcaccttgcagacgacgaggaggatatagatttcgctgattcggattgtacggtttatgcaaatctggcaaacgattgatgacaaattggcaatcacatatatgaaatgagagggggaaaaataagcaggttattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0439300, RefSeq:Os05g0439300