Os05g0440000

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0440000| Description = Zinc finger, Dof-type family protein| Version = NM_001062201.1 GI:115464132 GeneID:4338919| Length = 984 bp| Defini...")
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Gene Name

Os05g0440000

Description

Zinc finger, Dof-type family protein

Version

NM_001062201.1 GI:115464132 GeneID:4338919

Length

984 bp

Definition

Oryza sativa Japonica Group Os05g0440000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21601364..21602347

Sequence Coding Region

21601364..21602347

Expression

GEO Profiles:Os05g0440000

Genome Context

<gbrowseImage1> name=NC_008398:21601364..21602347 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21601364..21602347 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgtcttctcactgtgagagcatgctggcgtacgcggcggcggccgggcggcgagcggtggtggtcgaccaccaccaacggcggtacaggccgaacgtggaggttgcgcccaactgcccgcggtgcgagtcgcccaacaccaagttctgctactacaacaactacagcctcagccagccgcgctacttctgcaaggggtgccgccgctactggaccaagggcggctcgctccggaacgtgcccgtcggcggcgggtgccgcaagaaccggcggggcaaggcggtgcgcgccatggtcggggagacgatgacggcgcgcggcggcggcggcggcggcgcggcggcgttctctcaccggttccacgggcccgtccggcccgacatgatcctggaaggcatggccggcagcacggccgcctccgccggcctcggcgagcagccgggtgtggcggcgccggacgagaagcccgccgcggcggacggctccacgattgacctggccttgctgtacgccaagttcttgaaccaccaccagcctactatggcggagcagggcggtggcgccgccgtgccggaatcggtcgacacctcgagcgggtcatcgagcgatcgcacgacgagcccggccgccgcgcagcctgcggcggcggcggcgtacggcccggggcaagacgggctcgtcggcgagccgatcagcacggaggagcacggtgcagcagccatggcgcggtgcgcgcaggcgctcggggagctcaacttcagcgtggaccagatcagctgctacacctcgctggggttgccaacgacggacggcggagatctgatcctgccgtcgacgctggaccagcatgccaagtacgagccgttcgattcgctccccgaggacgcgctcagcctccacgacatcatctccggcgacgacgatgtctggtgcaacgcgttgggttgccaaggactggaagcagctctctgcaggccatga</cdnaseq>

Protein Sequence

<aaseq>MLSSHCESMLAYAAAAGRRAVVVDHHQRRYRPNVEVAPNCPRCE SPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGKAVRAMVGE TMTARGGGGGGAAAFSHRFHGPVRPDMILEGMAGSTAASAGLGEQPGVAAPDEKPAAA DGSTIDLALLYAKFLNHHQPTMAEQGGGAAVPESVDTSSGSSSDRTTSPAAAQPAAAA AYGPGQDGLVGEPISTEEHGAAAMARCAQALGELNFSVDQISCYTSLGLPTTDGGDLI LPSTLDQHAKYEPFDSLPEDALSLHDIISGDDDVWCNALGCQGLEAALCRP</aaseq>

Gene Sequence

<dnaseqindica>1..984#atgctgtcttctcactgtgagagcatgctggcgtacgcggcggcggccgggcggcgagcggtggtggtcgaccaccaccaacggcggtacaggccgaacgtggaggttgcgcccaactgcccgcggtgcgagtcgcccaacaccaagttctgctactacaacaactacagcctcagccagccgcgctacttctgcaaggggtgccgccgctactggaccaagggcggctcgctccggaacgtgcccgtcggcggcgggtgccgcaagaaccggcggggcaaggcggtgcgcgccatggtcggggagacgatgacggcgcgcggcggcggcggcggcggcgcggcggcgttctctcaccggttccacgggcccgtccggcccgacatgatcctggaaggcatggccggcagcacggccgcctccgccggcctcggcgagcagccgggtgtggcggcgccggacgagaagcccgccgcggcggacggctccacgattgacctggccttgctgtacgccaagttcttgaaccaccaccagcctactatggcggagcagggcggtggcgccgccgtgccggaatcggtcgacacctcgagcgggtcatcgagcgatcgcacgacgagcccggccgccgcgcagcctgcggcggcggcggcgtacggcccggggcaagacgggctcgtcggcgagccgatcagcacggaggagcacggtgcagcagccatggcgcggtgcgcgcaggcgctcggggagctcaacttcagcgtggaccagatcagctgctacacctcgctggggttgccaacgacggacggcggagatctgatcctgccgtcgacgctggaccagcatgccaagtacgagccgttcgattcgctccccgaggacgcgctcagcctccacgacatcatctccggcgacgacgatgtctggtgcaacgcgttgggttgccaaggactggaagcagctctctgcaggccatga</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0440000, RefSeq:Os05g0440000