Os05g0440100
| Gene Name |
Os05g0440100 |
|---|---|
| Description |
Histone deacetylase superfamily containing protein |
| Version |
NM_001062202.2 GI:297604581 GeneID:4338920 |
| Length |
2948 bp |
| Definition |
Oryza sativa Japonica Group Os05g0440100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:21607185..21610132 |
| Sequence Coding Region |
21608075..21608377,21608975..21609555,21609737..21610031 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008398:21607185..21610132 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008398:21607185..21610132 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagtcgtccgcctcctcctcggccgcggtggcggcggagggggcgccggcgacgggggagcagctggcggtgttctggcacgagggcatggtggcccacgacgccggccgcggcgtgttcgactcgggccgcgacccgggcttcctcgacgtgctcgaccagcacccggagaacgccgaccgcgtccgcaacatggtctccatcctccgccgcggccccatcgcgcgcttcatctcctggcactccggccgccccgcccacgccgccgagctcctctccttccactccgccgaatacatagaggagctcgtgcaagcaaatgccgttggtgccaagaagctgtgtgaaggcactttcttgaaccctggatcctggggtgctgcgcttctggcggctggaacaactttatcagcgatgaagcacatactagatggacatgccaagattgcctatgcgttggtccgcccccctggccatcatgcgcaaccggaccgtgctgatggttactgcttcctgaacaatgctgggcttgcagtgaagctggctctggattcaggacgcagaaaggttgctgttgttgatattgacgtgcactatggaaatggcactgcggagggcttctaccacacagacagcgtgctgacgatctctcttcacatgaagcatggttcatggggtccatcacatccccagagtggctcggtggatgagattggtgaaggcaggggtcttgggtacaatctcaatattcctttgcctaatggcagtggggatgcagggtatgagtatgcgatgaatgaattagttgttccagccatagagaagtttcgtcctgagcttttggtttttgttgttggccaagattctagtacgtttgatcccaatggaagacagtgcttaaccatggatggttatcggaaaattgggcaaataatgagaggcatggctgatcaacacagcaatggtcaaatattgatcgtgcaggaagggggttatcacatcagctattcggcatattgtctgcatgcaacactagaaggtgttctgaatctacaagccccgttgcttgatgatccaatcgcctattatccagaggatgagaaatacaccatgaaagttgtggacatcatgaagaaatgctggaaagaatctattccattcttgaaggacatatag</cdnaseq> |
| Protein Sequence |
<aaseq>MESSASSSAAVAAEGAPATGEQLAVFWHEGMVAHDAGRGVFDSG RDPGFLDVLDQHPENADRVRNMVSILRRGPIARFISWHSGRPAHAAELLSFHSAEYIE ELVQANAVGAKKLCEGTFLNPGSWGAALLAAGTTLSAMKHILDGHAKIAYALVRPPGH HAQPDRADGYCFLNNAGLAVKLALDSGRRKVAVVDIDVHYGNGTAEGFYHTDSVLTIS LHMKHGSWGPSHPQSGSVDEIGEGRGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIEK FRPELLVFVVGQDSSTFDPNGRQCLTMDGYRKIGQIMRGMADQHSNGQILIVQEGGYH ISYSAYCLHATLEGVLNLQAPLLDDPIAYYPEDEKYTMKVVDIMKKCWKESIPFLKDI </aaseq> |
| Gene Sequence |
<dnaseqindica>1756..2058#578..1158#102..396#acgtagccccggaggaagaagactctcggtcaagagtcaagacttcgaccaatcgaccaacacgaagcggcaaaggaaacgtcaccgtcgcggcgtcgccgatggagtcgtccgcctcctcctcggccgcggtggcggcggagggggcgccggcgacgggggagcagctggcggtgttctggcacgagggcatggtggcccacgacgccggccgcggcgtgttcgactcgggccgcgacccgggcttcctcgacgtgctcgaccagcacccggagaacgccgaccgcgtccgcaacatggtctccatcctccgccgcggccccatcgcgcgcttcatctcctggcactccggccgccccgcccacgccgccgagctcctctccttccactccgccggttagccccaaatctcgctatctcaaatcttggggaaaaaaaactctaattgacttggcccatagttagcattctcgatttttattatctgttacggcgattgttacatcctcatttgcatatggaatcgcagaagattagtgtacttaatagtttgtataaatcttgttatggttgacagaatacatagaggagctcgtgcaagcaaatgccgttggtgccaagaagctgtgtgaaggcactttcttgaaccctggatcctggggtgctgcgcttctggcggctggaacaactttatcagcgatgaagcacatactagatggacatgccaagattgcctatgcgttggtccgcccccctggccatcatgcgcaaccggaccgtgctgatggttactgcttcctgaacaatgctgggcttgcagtgaagctggctctggattcaggacgcagaaaggttgctgttgttgatattgacgtgcactatggaaatggcactgcggagggcttctaccacacagacagcgtgctgacgatctctcttcacatgaagcatggttcatggggtccatcacatccccagagtggctcggtggatgagattggtgaaggcaggggtcttgggtacaatctcaatattcctttgcctaatggcagtggggatgcagggtatgagtatgcgatgaatgaattagttgttccagccatagagaagtttcgtcctgagcttttggtttttgttgttggccaagattctagtacggtgagtcgaactggcatctatcttagttcattgcattttgcatttgctaagagtctaagattccacactatcgtaatataatttttcttttatgcaattatagctgctgtttcatttgacaagcaaggtttaatgtacttatataataattttcttgcgtgttcaagaaaaaaaagtgtacttatataaacaatcctaataaattcggataatcttttgccatcacctaagaaaacaacaacattttgattacaatattagcactagtcaatggtgtaaagatttaattcttgtgtttatagctttatatatctaaaccaagacaatactatcaaaagagttcaaaataatctgtctctaggatattctgaaatcattactatgttggaataataattttggatctttgcaaagtcgcatcttaccaaaacctaatttcaccttttccttgcctccctgaataatgcaccactcatatgcagtgatacttaatacattgttttacaatacgaaactatctatcatagtgatggtttaactgcatatttcaaaattatatctgaaacaaacttattaatggttgttattcccttgcagtttgatcccaatggaagacagtgcttaaccatggatggttatcggaaaattgggcaaataatgagaggcatggctgatcaacacagcaatggtcaaatattgatcgtgcaggaagggggttatcacatcagctattcggcatattgtctgcatgcaacactagaaggtgttctgaatctacaagccccgttgcttgatgatccaatcgcctattatccagaggatgagaaatacaccatgaaagttgtggacatcatgaagaaatgctggaaagaatctattccattcttgaaggacatatagaaatccatttcttttagatgcgagtgcccttgaacctcaatttcatatcagtgcaccgtctattcttatggccttttgactgaaagtacatgcattcattggagcaacattcgagtgcttgttcctttcataaacccctgattcacaagttctcaattcacattggtattgtacatacatcatgtcaaactctaccatcttatatttgtggacctcaattgctgcgcctaataagtaacgctgactaacagatgggctgtttgattatgcaatggggcattggggctacagccacctgtattatataagcgcaccagttccaagtctgaaaccaagtgccaagtctgaattattgtctagcaaggaatgctacctgctgccacatcactcgtcaacttactgcctacagcaatactggaaggtaatttttcaatatgactactgctagtgctaggtgatccaattgcttgccacccagtgaatgaatcgtccatctgttgcaaaagctggtcacactgccaagaaatgccagaaagaatcaaattcctttggaagtggctctttggaaggaatacatccatcttcttgtgatttgcgggtgtcatctcgctccatggaaccatattctacctgcgtcagcgacttatctccgatgattttttgcagcaaatcatacgcgccgcaaatgctttttcaggcggtgcgatgcgtcgatctctatcgaggcggtttcttttccgagtccgtgtgtttgtggtgaactgctccgtcgtatggctgcaatgctatgcaaaaattttgctcggttgcttgctttcgcacctggagttcttgaagaattctgtacaggtggacttttatctgaaattctctggtcaacttcatctccc</dnaseqindica> |
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