Os05g0440800

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0440800| Description = Protein kinase-like domain containing protein| Version = NM_001062204.1 GI:115464138 GeneID:4338922| Length = 5599 b...")
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Gene Name

Os05g0440800

Description

Protein kinase-like domain containing protein

Version

NM_001062204.1 GI:115464138 GeneID:4338922

Length

5599 bp

Definition

Oryza sativa Japonica Group Os05g0440800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21633627..21639225

Sequence Coding Region

21633775..21633872,21634009..21634075,21634182..21634247,21634324..21634370,21634454..21634499
,21634583..21634663,21634737..21634779,21634868..21634917,21635218..21635299
,21635383..21635432,21636441..21636514,21636738..21636789,21636867..21637526
,21637608..21639023

Expression

GEO Profiles:Os05g0440800

Genome Context

<gbrowseImage1> name=NC_008398:21633627..21639225 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21633627..21639225 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcgcggatggatcagtacgagatcatggagcaggttggccggggcgcctttggtgctgcaatccttgtgaatcataagattgagaggaagaagtatgtgttgaagaaaatccggcttgcgaggcagacagagcgttgccgcaagtctgctcaccaagagatggctctgattgctcggttgcaacacccttacattgttgaattcaaagaggcttgggttgagaagggttgctatgtctgcattgtcacgggctattgtgaaggtggagatatggatgaattgatgaagaaattaaatggtacttacttcccagaggagaaattgctgaaatggtttgctcaactggtattagccgtggactatttgcattcgaactatgtcttgcatcgggacctgaagtgctccaacatatttctcaccaaagatcaagatatacgcctaggagactttgggcttgctaagaccttaaaggaagatgatttaacttcttcggttgttggaacaccgaattacatgtgtccagagcttctcacagatatcccttatggattcaagtcagacatctggtctcttgggtgctgtatgtatgagatggcagctcatcggcctgccttcaaggcttttgatatggctggattaataagtaagataaataggtcctccattggccccttgcctgcctgttactcttcttctatgaaaactcttatcaaaagcatgttgagaaaaagtcctgagcatcgacctactgcatctgagattctgaagaatccgtatctccaaccttatgttaatcaatgccgccctctttctgatgctccaactcccatacgcatgccagagaaaccattatccacttcacggagtaatcagagatgcacgtctgagagccaaagcagtagcatttcttgtagtgatatcgacagtacacaatcaagtgacagaagcacatcagggggcgctcctagcactgacagcaagcttaacgatatcagaagcatccaagatgcagaccgagctgattcagacgaaaaatgtgtaacaccagaagatcttagaggcaacaagaacatttctggtgctgaactgaaaagacaagattcctcaaaaagtgtacatcagcatcacaggggtgagagtaagcagccaaaaataattgagaagataatgacaactcttagagaggagagtaggcttagagaaaacaattctcctgtaagttctagtggtgtaaagttgacttctgcagttagcaataagaatcaagcagagcaatcatcagagagctcaaggcctcacagtggtgtttcatacagttcaaagtttggtgacatttcatctaatggatggaccaatacaagcgatgaatgtgtagatccagtccaggtgccattgcaattgaaacaactgtcaccaactgttgagcattgtccaaagttaaaaaattccgggtcctcaactcctgaacctgccaaacagattgcagaaaatggttcctcagcttcaggaatgagtaaaaccaagtcgtcacctagttctagtagacggcctagtcctcagagacaaacagtagcaggaattccaatcgtgccattcactgtgtcaaaacgagctcatatcaaggcagagagtgagaaaacaccgccgcgacctgcccatagcccaaataattctctacataatctccctcctttgataccgatatctacaaatctgtcagaagagaacatcaagctgggtaattctcaggcaatgccagctcctctggaattcgtgactgcagcatccaaggaggacatcagcttttactcaaattctgtagttgattgtgttgaaaaggccgagccatctgaagtatttgaatctaattctccagcctacctgactccaccgtggacaggcccagtgcttgatgccaaaggagagaatggcctaatagccataccatgttcagaaatacacactggcacattgcagaagagtatggctagtaatgatgattcaagcctgagctctccgttggatacattttatcttagttttgaacaagagtttgtctgcaaggatgattcgcaatccagcaagcatgggcacagtgctgtcacactactaagtggtgaggacaaatttactgtccaagaacttcttgcatcaacaccagttatttctccttttgtttcaagcacaagtaacactctgccagaggataaaagttcttaccagtcattcaagaaacaatcagattcacattcgggccctccagttgatgttcctgcacagactattagactcaacagtttccttgttagtgatgagtggccaacatcagaaacagttcaaggggaagctcgggacacggctgccagcaagcttctgaatgtagtaagagaagattttgatgtaagaagcagttcatgctcaacaagcacgcaaccttctggacaaaccccagttagatccaaactcaacgtgcctgaaactaatcttgccagtaacatatccataccatccatatcagaagcagtgagattatctaccgccatggacgttaaaccgtacacgtccgaggccagcaatggagtcaaggaggaggcatctcctgccaaggaagctcttgatgttacgtcatttaggcagcgagctgaggctctagaaggtctcttggagctttctgcggacttgctggaaaacaacaggttggaggaactcgccattgttctacagcctttcgggaagaacaaggtctccccgcgagagaccgcaatttggttggccagaagtttcaaaggaatgatgaacgaagaaggtggccgcctgtcgatgtga</cdnaseq>

Protein Sequence

<aaseq>MESRMDQYEIMEQVGRGAFGAAILVNHKIERKKYVLKKIRLARQ TERCRKSAHQEMALIARLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMDELMKKLNG TYFPEEKLLKWFAQLVLAVDYLHSNYVLHRDLKCSNIFLTKDQDIRLGDFGLAKTLKE DDLTSSVVGTPNYMCPELLTDIPYGFKSDIWSLGCCMYEMAAHRPAFKAFDMAGLISK INRSSIGPLPACYSSSMKTLIKSMLRKSPEHRPTASEILKNPYLQPYVNQCRPLSDAP TPIRMPEKPLSTSRSNQRCTSESQSSSISCSDIDSTQSSDRSTSGGAPSTDSKLNDIR SIQDADRADSDEKCVTPEDLRGNKNISGAELKRQDSSKSVHQHHRGESKQPKIIEKIM TTLREESRLRENNSPVSSSGVKLTSAVSNKNQAEQSSESSRPHSGVSYSSKFGDISSN GWTNTSDECVDPVQVPLQLKQLSPTVEHCPKLKNSGSSTPEPAKQIAENGSSASGMSK TKSSPSSSRRPSPQRQTVAGIPIVPFTVSKRAHIKAESEKTPPRPAHSPNNSLHNLPP LIPISTNLSEENIKLGNSQAMPAPLEFVTAASKEDISFYSNSVVDCVEKAEPSEVFES NSPAYLTPPWTGPVLDAKGENGLIAIPCSEIHTGTLQKSMASNDDSSLSSPLDTFYLS FEQEFVCKDDSQSSKHGHSAVTLLSGEDKFTVQELLASTPVISPFVSSTSNTLPEDKS SYQSFKKQSDSHSGPPVDVPAQTIRLNSFLVSDEWPTSETVQGEARDTAASKLLNVVR EDFDVRSSSCSTSTQPSGQTPVRSKLNVPETNLASNISIPSISEAVRLSTAMDVKPYT SEASNGVKEEASPAKEALDVTSFRQRAEALEGLLELSADLLENNRLEELAIVLQPFGK NKVSPRETAIWLARSFKGMMNEEGGRLSM</aaseq>

Gene Sequence

<dnaseqindica>149..246#383..449#556..621#698..744#828..873#957..1037#1111..1153#1242..1291#1592..1673#1757..1806#2815..2888#3112..3163#3241..3900#3982..5397#tttcgatgcctttgcagaaatcgccttggtgcagtggagtggaggtgtatgaggtcgcgctcggccagtaggaatgagattggtctgggtatctagggtggacttgctgctgtgaagctgtgattgttctgttagggatttggggcacatggagtcgcggatggatcagtacgagatcatggagcaggttggccggggcgcctttggtgctgcaatccttgtgaatcataagattgagaggaagaagtgagtggcatagttctattttattttcatctttttaacaacttgataacacttatgtttcctttcactaagatgaagagtttgattttgctgttaatattagtcaccatatatttatatatgttgtgttgcacaggtatgtgttgaagaaaatccggcttgcgaggcagacagagcgttgccgcaagtctgctcaccaagaggttagtggaatgtggaagtggaagcttgcaatccctaggctttgtttgttcggttgtttgctagtggtattattaggaatttgatcacgacgaaaacgaattgcagatggctctgattgctcggttgcaacacccttacattgttgaattcaaagaggcttgggttgagaaggtttgtggattaggaacttactatatctagcttatctggtttatacttatttagttgacatgggtcagtaatgcagggttgctatgtctgcattgtcacgggctattgtgaaggtggagatatgtgagtgagattatgttttagattagtttttcaaatgtcattttgtatattttgttgtatctcagttttctcttttatcacagggatgaattgatgaagaaattaaatggtacttacttcccagaggaggtatggaatgacttctttgtttttgtcagaatgaagggaaaaaggcatccaaatatgtgctaataatactgcatgtttctcagaaattgctgaaatggtttgctcaactggtattagccgtggactatttgcattcgaactatgtcttgcatcgggacctgaaggtaacttcagaacagataatatcattttctcttatttaattggtagatttcaatattcttgtcataattgcagtgctccaacatatttctcaccaaagatcaagatatacgcctaggttagttccttaataataaactactacaggtctggatggttccatattggtttatcaacttacacatattccttgcctttgcatgcaggagactttgggcttgctaagaccttaaaggaagatgatttaacttcttcggtatgttccttttcctatttctatggttggtctctggtaaaaaaaaaattgcatcaccttaattttccccacaatgataagagcattacatttattaagttttgtaagtttttaatcattgacactgtcagacacaccgatgcagtacatcatcaaagacactaaccatgctgttcatcatgtgcatattattcattgtttatagttatctcttttacacacatttatctgaatttgtaaaataggtgaagttattattatttttctatgctcaaactgacagcataatgctttctttaggttgttggaacaccgaattacatgtgtccagagcttctcacagatatcccttatggattcaagtcagacatctggtctcttggtaactgcctttttctcctcaggtcttctacaagttcatattactgcatatttatcttaatttaagttacgctttctatatagggtgctgtatgtatgagatggcagctcatcggcctgccttcaaggcttttgtaagctactgggctcttatcatatattcttgctttattatattgtaatatacaggtttagctttcatagggtcatatgagttacagttttatcttttcgtgtcacatgttttcaaaaaggttcttgccttatactccctccgtttcaaaatgtttgacaccgttgactttttaatacgtgtttgaccattcgtcttattcaaaaaatttaagtaattatttattcttttcatatcatttgattcattgttaaatataatttcatgtacacatatagttttacatatttcacaaatttttttgaataagacgaacggtcaaacatgtgctaaaaagtcaacggtgtcaaacattttgaaacggagggagtatatttttatcttgactttaatatttgataaactggaatattatggtggaagtagtataaatcattcctaactaactgtccggtttcacatctttatttaatttgaaaatgtttgttacagaaattatattacaaacaacaatgaaattttttaacttaaattaaatttattagtatgtaaaagtatgatgtttgaagatggtgctgaaaggaactttgggtcaggttacagaagcaaacaacctacggagtatagacctgccattgcccaccggtaattggtcaggttgaatcgactaaaaattcaataaatctattgggtgtaatgatgtaaaattgcaaccattacttgtacacgtgcaccttgatctttcaatatggtcttccgtaaaaacatgctactgaggcatttacatgtagactctaacgcaataatttggaatatattgtgttgtccacaataatcatagaaaagaaaagaacaaataaaactatataagtcaatacatctatttgaagtttgaactttgccaatagaaaatatggaacattggaattcttgtgtgctatttaacaatgctactatttgtatttgccttttaagtttcagtgatcttatgaatcaacaatacctgcaggatatggctggattaataagtaagataaataggtcctccattggccccttgcctgcctgttactcttcttctatgtaagtgcatttattgcatcgaagccacattttatttttatttttcatgcctaaaagtgatgttgtaagtaatttcaatgacaatagaagcaagtcatcgtcttattttttacaaccaagtaatgttttggcaggagatacataatagatgaaattggctaaaaccttaacacatttccattttaatgcaagtatacatgcttctaattgctgttgtgtacaggaaaactcttatcaaaagcatgttgagaaaaagtcctgagcatcgacctactgtaagttaccacagttcttgaaatagctttatttcttcatctggattctgaaaacacatgaaaaatcttgttaacaggcatctgagattctgaagaatccgtatctccaaccttatgttaatcaatgccgccctctttctgatgctccaactcccatacgcatgccagagaaaccattatccacttcacggagtaatcagagatgcacgtctgagagccaaagcagtagcatttcttgtagtgatatcgacagtacacaatcaagtgacagaagcacatcagggggcgctcctagcactgacagcaagcttaacgatatcagaagcatccaagatgcagaccgagctgattcagacgaaaaatgtgtaacaccagaagatcttagaggcaacaagaacatttctggtgctgaactgaaaagacaagattcctcaaaaagtgtacatcagcatcacaggggtgagagtaagcagccaaaaataattgagaagataatgacaactcttagagaggagagtaggcttagagaaaacaattctcctgtaagttctagtggtgtaaagttgacttctgcagttagcaataagaatcaagcagagcaatcatcagagagctcaaggcctcacagtggtgtttcatacagttcaaagtttggtgacatttcatctaatggatggaccaatacaagcgatgaatgtgtagatccagtccaggtgccattgcaattgaaacaactggtatgagcctatatttcttatcacaaaacgtccatttatttttcttcttctaataggttttgcttggttctggttttgcagtcaccaactgttgagcattgtccaaagttaaaaaattccgggtcctcaactcctgaacctgccaaacagattgcagaaaatggttcctcagcttcaggaatgagtaaaaccaagtcgtcacctagttctagtagacggcctagtcctcagagacaaacagtagcaggaattccaatcgtgccattcactgtgtcaaaacgagctcatatcaaggcagagagtgagaaaacaccgccgcgacctgcccatagcccaaataattctctacataatctccctcctttgataccgatatctacaaatctgtcagaagagaacatcaagctgggtaattctcaggcaatgccagctcctctggaattcgtgactgcagcatccaaggaggacatcagcttttactcaaattctgtagttgattgtgttgaaaaggccgagccatctgaagtatttgaatctaattctccagcctacctgactccaccgtggacaggcccagtgcttgatgccaaaggagagaatggcctaatagccataccatgttcagaaatacacactggcacattgcagaagagtatggctagtaatgatgattcaagcctgagctctccgttggatacattttatcttagttttgaacaagagtttgtctgcaaggatgattcgcaatccagcaagcatgggcacagtgctgtcacactactaagtggtgaggacaaatttactgtccaagaacttcttgcatcaacaccagttatttctccttttgtttcaagcacaagtaacactctgccagaggataaaagttcttaccagtcattcaagaaacaatcagattcacattcgggccctccagttgatgttcctgcacagactattagactcaacagtttccttgttagtgatgagtggccaacatcagaaacagttcaaggggaagctcgggacacggctgccagcaagcttctgaatgtagtaagagaagattttgatgtaagaagcagttcatgctcaacaagcacgcaaccttctggacaaaccccagttagatccaaactcaacgtgcctgaaactaatcttgccagtaacatatccataccatccatatcagaagcagtgagattatctaccgccatggacgttaaaccgtacacgtccgaggccagcaatggagtcaaggaggaggcatctcctgccaaggaagctcttgatgttacgtcatttaggcagcgagctgaggctctagaaggtctcttggagctttctgcggacttgctggaaaacaacaggttggaggaactcgccattgttctacagcctttcgggaagaacaaggtctccccgcgagagaccgcaatttggttggccagaagtttcaaaggaatgatgaacgaagaaggtggccgcctgtcgatgtgagtatctgtaaccttaaaaggcctttttattgctttcccctttgcttttttgagtagctcaaagtgggcttgatttgctgacagcgtgttgtgtttgtgttgcccggttttgttttttgtttcttttgattcaaaccattctttttggcgcatgttgtaaatagccaagacttgtaaacactaataaaatttgccttcagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0440800, RefSeq:Os05g0440800