Os08g0327200
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0327200 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001068091.1 GI:115475919 GeneID:4345285 |
| Length |
2405 bp |
| Definition |
Oryza sativa Japonica Group Os08g0327200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:14492169..14494573 |
| Sequence Coding Region |
14492582..14492800,14492874..14493392,14493489..14493664,14493859..14494000,14494097..14494264 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:14492169..14494573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:14492169..14494573 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggaggcgcggctgcggctgctcgtcgtcgtcgtcgttgttgccgggcactgcgccgccgtcgcgtccgccgccggtaactcgtcggtggtggggtaccacggggacccgacgttcaacgtcaggaactacggcgctaaggggaacggccaaaccgacgacagcaaggcgctgatgacggcgtggaaggcggcgtgcgcggcgaccggggcggtgacgctggtgctcccgccggggacctactacatcgggccggtgcagttccatggcccctgcagcaaggccaccaccatgaccttcctcatgcaggggacgctcaaggcggcgaccgacctgaagaggttcggcaacgactgggtcgagttcgggtgggtgaaccacctcatcgtctccggccagaacggcgccgccttcgacggccagggcgccgcctcctggcccttcaacaagtgccccatccgcaaggactgcaaagtcctccccaccagcgtgctgttcgtgaacaacaaaaacatggtggtgcagaacgtggcgtcggtgaacagcaagttcttccacatggcgctgctgcagtgcagcggggcgaagatcagcggggtgaagatcagcgcgccggagagcagcccgaacacggacggcatccacatcgagcggagcaacggggtgtccatcgcggacaccaccatcgcgacgggcgacgactgcatctccatcgggcaggggaacgacaacatcgacgtggcgcgcgtccactgcgggccggggcacggcatgagcgtgggcagcctcggccggtacgtcggcgagggggacgtcacgcggatccacgtccgcgacatgaccttccacggcaccatgaacggcgtccgcatcaagacgtgggagaactcccccaccaagagcaacgccgcccacatgctgttcgagaacctcgtcatgaacgacgtccagaaccccatcatcatcgaccagaagtactgcccctactacaactgcgagcacaagttcgtgtccggggtgacgatcaaggacgtgcagttcaagaacatcaaggggacggcgacgacgcaggtggcggtgctgctcaagtgcggggtgccgtgccagggcgtcgtgctgcaggacgtcgacctgcggtacaaggggaacggcgtctcgtcgtccaagtgcgagaacgtcagggccaagtacgccggcttccagaaccccaagccgtgcccgtag</cdnaseq> |
| Protein Sequence |
<aaseq>MEARLRLLVVVVVVAGHCAAVASAAGNSSVVGYHGDPTFNVRNY GAKGNGQTDDSKALMTAWKAACAATGAVTLVLPPGTYYIGPVQFHGPCSKATTMTFLM QGTLKAATDLKRFGNDWVEFGWVNHLIVSGQNGAAFDGQGAASWPFNKCPIRKDCKVL PTSVLFVNNKNMVVQNVASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIER SNGVSIADTTIATGDDCISIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIH VRDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEH KFVSGVTIKDVQFKNIKGTATTQVAVLLKCGVPCQGVVLQDVDLRYKGNGVSSSKCEN VRAKYAGFQNPKPCP</aaseq> |
| Gene Sequence |
<dnaseqindica>1774..1992#1182..1700#910..1085#574..715#310..477#actctcgttgatcactccgcacccccctcaactctctctatcgatcgatcgatcgatctgtgcctccatccccgatgcccccatcaagatctcatcatcaggatcatctccctgccgccgccgccgagtgaaatcaactagtgtatgcctctcactgtggctgagatcaagtgaccgaggaagaagacgaaggagacggcggccggcggtgtaaagctgtatagctagctctctagctctgcgtgtgctcggtccccgcgccgcagtgctgtgcctgtgcctgtgcctgtgcgctatctagctgtggagatggaggcgcggctgcggctgctcgtcgtcgtcgtcgttgttgccgggcactgcgccgccgtcgcgtccgccgccggtaactcgtcggtggtggggtaccacggggacccgacgttcaacgtcaggaactacggcgctaaggggaacggccaaaccgacgacagcaaggtagctgaggaacaatcgatcgatcaagctagctccttggttgaattatcccctagcttcttggctaactgcgaggtgttcgtccgcgacatgcaggcgctgatgacggcgtggaaggcggcgtgcgcggcgaccggggcggtgacgctggtgctcccgccggggacctactacatcgggccggtgcagttccatggcccctgcagcaaggccaccaccatgaccttcctcatgcaggcaagtatactgtataccaaccaaccagcaggcagtttggtcccgtggccatggccggccactacgtgacatggatgcagttgcattttgcatccatccatctcgatcgagcaagtacgtggggctgggctgaccgattgatccatcgatcgaacgatccgtggtggtgtgtggtgggtgggtgcgttttgcaggggacgctcaaggcggcgaccgacctgaagaggttcggcaacgactgggtcgagttcgggtgggtgaaccacctcatcgtctccggccagaacggcgccgccttcgacggccagggcgccgcctcctggcccttcaacaagtgccccatccgcaaggactgcaaagtcctccccaccgtgagcatcttgcttcttcctttcgtcaatccatcatcatcgccattagcagagtgtgcagctaattaagcttacattataatggcgagtatgcagagcgtgctgttcgtgaacaacaaaaacatggtggtgcagaacgtggcgtcggtgaacagcaagttcttccacatggcgctgctgcagtgcagcggggcgaagatcagcggggtgaagatcagcgcgccggagagcagcccgaacacggacggcatccacatcgagcggagcaacggggtgtccatcgcggacaccaccatcgcgacgggcgacgactgcatctccatcgggcaggggaacgacaacatcgacgtggcgcgcgtccactgcgggccggggcacggcatgagcgtgggcagcctcggccggtacgtcggcgagggggacgtcacgcggatccacgtccgcgacatgaccttccacggcaccatgaacggcgtccgcatcaagacgtgggagaactcccccaccaagagcaacgccgcccacatgctgttcgagaacctcgtcatgaacgacgtccagaaccccatcatcatcgaccagaagtactgcccctactacaactgcgagcacaaggtgcatcttcatcttcctaattcattcgccattgccgtcgatcgatcggcctgaccgtcgtcgaactgtgcagttcgtgtccggggtgacgatcaaggacgtgcagttcaagaacatcaaggggacggcgacgacgcaggtggcggtgctgctcaagtgcggggtgccgtgccagggcgtcgtgctgcaggacgtcgacctgcggtacaaggggaacggcgtctcgtcgtccaagtgcgagaacgtcagggccaagtacgccggcttccagaaccccaagccgtgcccgtagccccatgacgacgatctgtgacgagatcgttaattttttgcatgctgtcttggcaagcatgcacctagcaagcaacaaagacactagcttagctagctccgattaatgtgtcgtgcactgagcttaattaatttgtgattcttttcttttccctttatgctacttagacgattttcttttcttttctccttcatgtacgtttcttagacgattttgttgctttgatttttttttcccctctcccttgacgcttaattatagtggattctgtacgtggtataagtgagctgccgattactggcattagtttctgaatcactcaacttgtgaataccccaatgtcatgcttaattaattggaacaaagactaaactgtctcaaaagccgtctggttcgatccatcattccatctc</dnaseqindica> |
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