Os08g0346500

From RiceWiki
Revision as of 20:48, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0346500

Description

Hypothetical protein

Version

NM_001188601.1 GI:297726332 GeneID:9267033

Length

5592 bp

Definition

Oryza sativa Japonica Group Os08g0346500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:15798792..15804383

Sequence Coding Region

15801564..15801811,15802823..15802892,15803656..15803759,15804070..15804175

Expression

GEO Profiles:Os08g0346500

Genome Context

<gbrowseImage1> name=NC_008401:15798792..15804383 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:15798792..15804383 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatttcttcctaactttttgcctgtttgcttttatttgtctagaaataccggcttgcaaagtacattccagacccttcagctgatggtagggggcatttgtattctactaatccttttagatatgtccaaggaagaacatatttatattattatttcactttatctaatctatatcccttgtgtagacaacaaggatgaagataaagatccagggaatctgctttctgcacttgaaggttcatctggaatgcagatatctgaagccctgaagctgcagatggaggtccagaagcggctacatgaacaattagaggtgcaaaggcagctacagctgcgaattgaggcgcaggggaagtatctccagaagatcatcgaagagcagcagcgtgtcattggtgcaggagcttccagagccactcaagcacaggatccgagttccaagaatgttcgatgccttattcaggccattagcctatggtgctctgatcatcagtccatcaccttgacaaagcttacatggtaa</cdnaseq>

Protein Sequence

<aaseq>MAFLPNFLPVCFYLSRNTGLQSTFQTLQLMVGGICILLILLDMS KEEHIYIIISLYLIYIPCVDNKDEDKDPGNLLSALEGSSGMQISEALKLQMEVQKRLH EQLEVQRQLQLRIEAQGKYLQKIIEEQQRVIGAGASRATQAQDPSSKNVRCLIQAISL WCSDHQSITLTKLTW</aaseq>

Gene Sequence

<dnaseqindica>2773..3020#4032..4101#4865..4968#5279..5384#actcgagaaggaaaaaaaataaataaaaaaaaatcgcttggcttccccccgtctccttgcgcctccgccccctactccggcgagccgagccgccgtccgccgccgccgcatcgcgagtccttccctcgtcgggcagtcgcctgccccaggttagcagcctccgcctcctcctcctcctgctcccccctcgcgtcgccactcccggtgggggcgatccgctcgtatccgtgggttgatgtttcctgcgtttcttggcacccgatttattggctgcttgggtgctacaccccgtaccaatccgagcgctatgagctcacgcgcactgggggactccggcctccggcacctggtcggtgcgtactggcagctgagattgttgttgctatgtatgtgagatgcttgtgtacatgtgggtactactttggtagccacctacttgtgccccagtttcagtaaatgtgctcaattttaggggttttagtcattttgttgcttgtgtagtatcgtcatcttgtggtcggaggatgagtatcggcgctctttctttgcaaattggagtagatttagcccttgaatgatgtatggtggcatgagttatttttaatggttttagtttcgctagacctgcctgaaatgtagtcttactgtccttcgggagatatgagcacataacttgggtgtatgtactatgtaggacagtttttttggtaccatggcctttatctacttgttgaaagtatagttggaaaatttatctgttaaaatttcatgtactgtgtaggtgagatggtcctactgcagcaatctgccgttaatatgatctttttttttgtcctcaggatatcaattcagccacacattccctacatcgttgctagttacacatgtagcacctctggttgaaagccaatactactactgctacctaatccaaagcaagggtaatgtataccatgttgcgcttgtattcccaaggatatggttgtttaatctttgcatatgtcttccaccattatatcgttgattttgtaataattcgtctatcaacatctcacttgtgttgctgacaccttccacaacaatttatcactagtttttgaacaaaaggtcttatgaatccaaattccaagtgatagcctctcctagaactcttccgttgttacagtgatttttaatttagactgatgcaatgaattacttatctagttttcattggatggaaaagctaaaatctcaattgtgcagtcatgataattaagttggtatctgtcctactggtaactctaaactgtcggtttcagtttcaactaatgaactatcctgtagggttcaaagcaatacaggaaatctgtttttttttttttttttgcctctcaagcattaagttggttttcaagtgttagcaggcagataataattttagtgctattttgcatccatagacttgtgttagagtaaagtgttctgaaaatgtctgtataccctgtacacctccagcttcacaaaagagcaagttgtgaaattctaatggtgtattaagtttttgttttctttaattacgagatgacatatcatcttattaaatgttttacttcctggataaatccagtgctgtaaattcaggtgatgagcaaatgcaatgtatcagccaaatcctatttccagcagtggtcagactcatggcaatcctactgctcatgagcaaatggagttagggaacaatgctattgtccctagtaacggagggaacaataaccctaatatggcggcaagacagcggttacgttggacaaatgagttgcatgaccgtttcgtggaggctgttactcagcttggtgggcctgatagtatgtcctccatgattcaactcgtttttccctttttgttgctccttttatagttttatattttatctagtacgtagagttagagaagttggttctagtattatacattacatgtttgcaactgtggtgactgtttttgatttataatatgcatttgctgtactaaatgaaaactataagcttgacaaatatgacaatagcacgatggtaatattcaagatctgaaccaaaatgaatggaatgtaatgggtattgatctatctttcctcaagaccataaaagcacacaaaaaaaaaaacacttgcatctattccaccatttgatttattcctgattacttcatcttcttgatattgatcatcttcctttagaattagctctgtgaaatatgagttttccaaggagacattgaatgagcatgtgatctggaaatggtgatttattgggcaattgaaagaattctttgattcatggtttgcatgtagtttgcatgcatccatgggaaaccctgattcttaatatgatttgtgttaaaaatgcaaacagagtagtacaacatatgaacatgctattaatactaaaataaaatatatatttgatattctcaacctccctctgcatatagtagttttattgattttattccttgtacaccacttaatattcacagaattcctttatatgcaactcatgcctttcaaagaacttgtcagctcacaatgttatggaaccactgtttttgaactgcatagtttattaagtaggtatgtctacttataatgtaattcctcaattgtgacaggagccactcctaagggagttctgagaattatgggtgtgccaggactgacaatataccatgtgaaaagtcacctacaggtaaaattattgcgaaacaaatgaccctttatcagtttgaccatctatggcatttcttcctaactttttgcctgtttgcttttatttgtctagaaataccggcttgcaaagtacattccagacccttcagctgatggtagggggcatttgtattctactaatccttttagatatgtccaaggaagaacatatttatattattatttcactttatctaatctatatcccttgtgtagacaacaaggatgaagataaagatccagggaatctgctttctgcacttgaaggttcatcgtaagttcaaataactctactccgttggtctttgtgtttacttttgagaaacatggatctcactactagtaatcaaggaaaggaaaaggctcaagtccaatggttttcttatgtgttgatttgttctgtttagtaggttaaacataatttacagttaacatcatcatcaaaatgcctgatggcatgggagaaaagaaatacattgctgcattttatattattagtaatgaaaataaaggaagtatcaagcaacttgtttgtaatgatccaaagtttattgggggtaaataccatttatatagaggccagatggcatgtggggagatttctatattcttatttttgctgaattaaaatgaaaacttccatctctctatattcttatttttgtttagagattatctctaacaaattggactagagataagtgaaatctaaactaaggtggagataccatagaaattaaactaaatactccctccggtcataaatatttgatgttcggacaaggttaactcaaacttaaaactttgaccatcaataatctctcagatgcttacttttaaaggtaaaataatgtatatgtagaattgccttgataagtactaggtactatcataatcttgtgaacttataagattttatagatagacttgttctaatataaaatcgaatatcaaagattaaaagatttgaccgaaactgtcataaccatcaaatatttatgactagagggagtagtaactaagttatcaggcaactgtacttactggagataatgttgttactgtgagcctccattgtgctgcagctgtttctggaattgcagtagttctgcagttatacctactagagtagctatcaagcttaccagcatgttcttatccttctattttttgaatttgcaatatatactgtttacattggcctgatcattggcctgatctcattacttctataaccatgtgccatttggtataagaaactcatatttttacacttccgttgcagtggaatgcagatatctgaagccctgaagctgcagatggaggtccagaagcggctacatgaacaattagaggtaagctcctgctgcactaatatgaagcacactttatgatatgaaactcacaattattgatgtttctagttgagtgatgtgtaatgtaccatcaactagattatggtgttaatgttgagacttgagaataatccaataaataaaatcaaatcgtggttaaattgtaaaagggatgctaaattcaatggtgttttctggtgtacagaagtctcagtatgatatggcagtggattatgatgatctcatttggtgcaactgcttttagacaatttggcgtttggcaaactatttttcttttattctatgcagcaaacgaaaatactattgtgttccaaaaatgtgccacagttgaaggagacatgaatgttggataacaatttgatctgtaacgcaaacttaaccattataagttttcaatgaaaaaaaagaatagaacaccacagcacagcacagcacagcacagcacagcacagcacaacaactgcaaatggagcctaatgtgccagaataatcttgtattagatagaattcacaacaccagtttgttagttgaactaaatattgtaataattgtacagaattgttttcattttggagctttgcttcagcaataacctaggagagattatgaatcttacagttgtacagtaaacttagagtaatactacgtacacagagtcttcctagtatacagcaattgttctactgaagaaaccatgtgcaactttcttgtgtaatctgaactaacaaacatctcttgcaggtgcaaaggcagctacagctgcgaattgaggcgcaggggaagtatctccagaagatcatcgaagagcagcagcgtgtcattggtgcaggagcttccagagccacgtcaagcgaacaattgcctgactctgagaaaactaacccaccaactccagtaccaatttctgaatctccagttcagggtgcaccccatagcaagaacagtcaaagccaagttgagccgacgaagagcccttcgcatgatgatgctctcccgtgtggtgaacctttaacacctgactccagctgccggcctggttcaccgacgctcagcccaaagcatgagcgtgcagccaagagacagaggggcagtgatgcaggcgatgtcacagcattcgcagatggagaatttgtacttccaccaggcatctttgagtcaagcacaggatccgagttccaagaatgttcgatgccttattcaggccattagcctatggtgctctgatcatcagtccatcaccttgacaaagcttacatggtaagatttcatctgtagccgttggtagattttggccttgtcaacacaaatacctttagacagagagtctaggtttcaaaaggaaattgggcacatgacatgcagagtagctgtaattcttgcactgttgttagatgttcatggggactaatgtaactgatatttaattaaaaaatattattttagaatgacttatgttatgcttcatgcca</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0346500, RefSeq:Os08g0346500