Os05g0443500

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0443500| Description = Similar to Ferredoxin VI, chloroplast precursor (Fd VI)| Version = NM_001062210.1 GI:115464150 GeneID:4338930| Lengt...")
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Gene Name

Os05g0443500

Description

Similar to Ferredoxin VI, chloroplast precursor (Fd VI)

Version

NM_001062210.1 GI:115464150 GeneID:4338930

Length

1336 bp

Definition

Oryza sativa Japonica Group Os05g0443500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21751562..21752897

Sequence Coding Region

21751852..21752298

Expression

GEO Profiles:Os05g0443500

Genome Context

<gbrowseImage1> name=NC_008398:21751562..21752897 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21751562..21752897 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaactgcaactgctccgagattgtgctttcctaaacccggcgcggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaacatgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggtaaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacattctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatgctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcctcgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcggattgcgtcattcacacccacaaggaggaagaactctactag</cdnaseq>

Protein Sequence

<aaseq>MATATAPRLCFPKPGAAIAPATKSPSFIGYAKQTLNMSGLRISN KFRVSATAVHKVKLIGPDGVEHEFEAPEDTYILEAAETAGVELPFSCRAGSCSTCAGK MSSGEVDQSEGSFLDENQMGEGYVLTCISYPKADCVIHTHKEEELY</aaseq>

Gene Sequence

<dnaseqindica>600..1046#cttcttcttacttaccctcccttctgatcccctgtttcccctggtcatggcggcgagatctccgtgtaggagtgagatcgccgcctcctcctcatggtgtttcctggtgcggcgcgcgtgagagctcggcccgagcccgagccctctcgcttttgccgtgccggatctgattctgtccgtgctagtgttagtgtcacgttttggtgtagacagtagactcatgaaacgaggagaggcttttttgtaggatgggtcaacttttaggaacttgtccaaagtttaacaactctcaaggatgaactgggaatagtggcgctgttatacattaggagttggtctgcgagaaatttggatgggattagttgcggatcttccatcagctagtggagcttaaagatactgatgtgttgtccgtactgaaatgcacttctttgccttggcaaaaccccagtctcccccataaatttagttttgtttgcttagctttaccaaatgccatcagcatacatggtgtaaaatcatatacttttgtaacgaacgaattgtgtttatttgcatttcaactagtgctttcttcctaatttatcaggactatcgagatggcaactgcaactgctccgagattgtgctttcctaaacccggcgcggccattgctccggcgaccaagagcccttccttcattggttacgcaaagcaaacattgaacatgtcaggcctaaggatctccaacaagttcagggtgtccgcgacagcggtgcacaaggtaaagcttataggcccggacggtgtcgagcacgagtttgaagcccctgaagatacctacattctcgaggccgctgaaactgccggggtggagctgccattctcatgccgtgctggatcatgctccacatgtgcgggtaagatgtcatcgggagaagttgatcagtcggaaggatccttcctcgacgagaaccagatgggcgagggatacgttctgacatgcatttcgtaccctaaggcggattgcgtcattcacacccacaaggaggaagaactctactaggtcgctctttttatgcttctgtgggcacatttgctgatttcaaagtggactcgctgttcagttagttttcgctatccaaaaaatggccatatctttgtattagtcttttgatgggaccgtgtcatatgagttgtgacaataattgtcgtagtcctgttcagcatttcaaattgcgtttgttcaattcacagcaggtccaacttccaacgatgacatgttatcagaagttgtgtgtaatggtattattgtggatcacttccagtaggaaaaaattgacttgtcctttctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0443500, RefSeq:Os05g0443500