Os05g0443700

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0443700| Description = contains InterPro domain(s): IPR010989| Version = NM_001062211.1 GI:115464152 GeneID:4338931| Length = 3179 bp| Def...")
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Gene Name

Os05g0443700

Description

contains InterPro domain(s): IPR010989

Version

NM_001062211.1 GI:115464152 GeneID:4338931

Length

3179 bp

Definition

Oryza sativa Japonica Group Os05g0443700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21754294..21757472

Sequence Coding Region

21754680..21754705,21755099..21755219,21755380..21756030,21756162..21756294,21757265..21757341

Expression

GEO Profiles:Os05g0443700

Genome Context

<gbrowseImage1> name=NC_008398:21754294..21757472 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21754294..21757472 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagggcttcgggcggtgggaggcggatccgctcttccccgccgccgagtgcgtgcaggactccgccgacaggatggagggtgtgtaccgcttgctcttgcatgaaagaaaactgatacaagatgatacctcacatacaaaacgtcgtgtatcaatgcagtatgagagagatgtgtgcactgctcttggaacaacaaagtggcagttggagcaatttgagcgagaagtgaatgcagcggcattgtctaataagtcaaattcaagggaaaatgccatcttgcaatttaggcaatttattagagctatagcggagcaaatttctcaggtggaagatagtttggagagtcttaggaatgattccattagaacaccaaaacattcatacttgactgaacatgatggagatgaattggcatcttttctttctggtagtaatagaaaggataatcatgtgatttattccactggaacagatgaaattgttgagctcaagcttgatagtgttcctgcagtaaatggttatcattccacccaagaacgtacatcatgtgaattcagatattcaggagaagatgtggaaggagcagccaagcctcaatgttcatgcggggaaaatgcatgtgaaggagatcataatggtagcagtatgcgtggtttggattctgatgattcaataggtaggaagcatcatttcaggagcaaactgagcaggaaataccacagttttatgcggaatttatggtttacaaatagaggacgtgagagttttacaaagaggaggaaagatggagaagttatggatagcttgagaaatggaagtacattaccttcattcaatctacctccagctggaagggctatgtatttctggcctgagcttatcaagaggagattaagtaaatttaaatgctctacacatcacaagcatcttcaagtccgtttagcaacagtactactaattgcccttgctgtacttggcttgctggttttgcatgtgagatga</cdnaseq>

Protein Sequence

<aaseq>MAEGFGRWEADPLFPAAECVQDSADRMEGVYRLLLHERKLIQDD TSHTKRRVSMQYERDVCTALGTTKWQLEQFEREVNAAALSNKSNSRENAILQFRQFIR AIAEQISQVEDSLESLRNDSIRTPKHSYLTEHDGDELASFLSGSNRKDNHVIYSTGTD EIVELKLDSVPAVNGYHSTQERTSCEFRYSGEDVEGAAKPQCSCGENACEGDHNGSSM RGLDSDDSIGRKHHFRSKLSRKYHSFMRNLWFTNRGRESFTKRRKDGEVMDSLRNGST LPSFNLPPAGRAMYFWPELIKRRLSKFKCSTHHKHLQVRLATVLLIALAVLGLLVLHV R</aaseq>

Gene Sequence

<dnaseqindica>2768..2793#2254..2374#1443..2093#1179..1311#132..208#ggaagagagatttccctcgcgcgcttgtcgttcgccttcttcccctttgcggatttgaatccgctcgggggcgctattacctattggcgccgcggcggcggcggcggcgatttgagtcgggatcccgctcgatggcggagggcttcgggcggtgggaggcggatccgctcttccccgccgccgagtgcgtgcaggactccgccgacaggtccgtgtgcttttcctttccttaacgttctttctctgtttctcgatctgtggctctctgctagaattgtgcgcgtactttggtttacaaatctcggggggaatatgccaagaaatgtgtagttggaaggattcgctgcgtgctcgacgggattacgtggctcctgttctggagcacgggaattcttcgatgcggtttgttccgttcatgtgaatctgcgtggattactggattggcttctgcgactaggagatgctaggctgggaattggtggcaaatggcagacaacgttttgtttcccagggtttcatggccgtctttcggatgggagattctggagatgtcagcttggatgggcacgctccgtcaggattgagcattgtttggggaataatatgcaacttcactcaactttgagaaacttctcttattttggggcacgcctttctgggatgcatgaatgactgtctttctgttgcaagagcttagcataatggtaccatgtgcctataacattttttccatgtaaataggagttgtataaattgaaattaatcatgttttgtcgttgtggtgctagtcttgtgtttgattatcatttaccttatagcaaaacctggtttgttaccgtggtaaatagtaaatactagccatcaacttatgtgtctatgttccacctttctatgggagttgaattttgtattttagttctaataagaggtaacctatacgcctccacatggtaccaccgtaccagccaaatctaagtgttttctccatatgcacttttttgcactgtcatgcaaatagtatagatttttctctgtcttgatcaagctaggagttataatgaattttctgtcttggttagtgtaagagcaattagtgaattactgaccctacaagtaatgtatacaaataagatccttttctaacaagaagttataaccataattttggattgggacaggatggagggtgtgtaccgcttgctcttgcatgaaagaaaactgatacaagatgatacctcacatacaaaacgtcgtgtatcaatgcagtatgagagagatgtgtgcactgctcttggaacaacaaagtggcaggtttgcatagtcaagctctccatttttaacatatttttaatcattcttatccatatatcatatgtttttcgggttatccgtccacttctgcatttaaagttctaaggtctttattctcctaaaactggcagttggagcaatttgagcgagaagtgaatgcagcggcattgtctaataagtcaaattcaagggaaaatgccatcttgcaatttaggcaatttattagagctatagcggagcaaatttctcaggtggaagatagtttggagagtcttaggaatgattccattagaacaccaaaacattcatacttgactgaacatgatggagatgaattggcatcttttctttctggtagtaatagaaaggataatcatgtgatttattccactggaacagatgaaattgttgagctcaagcttgatagtgttcctgcagtaaatggttatcattccacccaagaacgtacatcatgtgaattcagatattcaggagaagatgtggaaggagcagccaagcctcaatgttcatgcggggaaaatgcatgtgaaggagatcataatggtagcagtatgcgtggtttggattctgatgattcaataggtaggaagcatcatttcaggagcaaactgagcaggaaataccacagttttatgcggaatttatggtttacaaatagaggacgtgagagttttacaaagaggaggaaagatggagaagttatggatagcttgagaaatggaagtacattaccttcattcaatctacctccagctggaagggtgtgttatatcctatatttgctttacttcctggttgcttatatatcaaaatagcacaatctatctactattttagcataataacaaggctgtactcctataaggaatattgatttcttttgatttctcacgtaataactaacaacctttttttttgcaggctatgtatttctggcctgagcttatcaagaggagattaagtaaatttaaatgctctacacatcacaagcatcttcaagtccgtttagcaacagtactactaattgcccttgctgtacttggtgagttgcaccaaagccatctgttcttgagcatttctgatgattaaccattctgctatttaaaaaaaatgataattttcaactttcaagtagcatactatgttttgcatcgcagtgtttggcagttttaatacctgaaaaaaaataaatggaactgtttggtggtttcttgcagtcgatgcatccaattagtatttctcttagtgtccataatgttcagttcaaatctttgcaatagttagtggtagtatacctggaaactggaaatgcaagcaccaaggttgtaaactctaacaccatggacattctgtatcataacctgcatcaaaacaagatagtattttcaatgaagtgtaaggttctccatctgaaatgattttgcacatgctgcaggcttgctggttttgcatgtgagatgactgggagcagtatccggttttggtccctgttgtgtacgtgccaatcgccatgttgcactgtaccaatcaatcattttcatagttcctgatggaggaggatccgtgtgctattgagcaccatttgctattttatattgccattcgagggagacataggtttggcgtcatttgattgctcctaagtagcctggaccagcactgacatgagctgtgattttccacaaatccacattttttgttcagaactgccacgtgaatacacgatgtattgtattggcttgtttgtgatacttgcacaatcaagtaatcaaccattgtctgatcagtaagatgacaaagtcttctccagatttttacggtagcaatcctgttaatatattccaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0443700, RefSeq:Os05g0443700