Os05g0444200

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0444200| Description = Similar to T6J4.5 protein (WIP6 protein)| Version = NM_001062214.1 GI:115464158 GeneID:4338934| Length = 2391 bp| D...")
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Gene Name

Os05g0444200

Description

Similar to T6J4.5 protein (WIP6 protein)

Version

NM_001062214.1 GI:115464158 GeneID:4338934

Length

2391 bp

Definition

Oryza sativa Japonica Group Os05g0444200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21783121..21785511

Sequence Coding Region

21783359..21784039,21784676..21785164

Expression

GEO Profiles:Os05g0444200

Genome Context

<gbrowseImage1> name=NC_008398:21783121..21785511 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21783121..21785511 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgctgagggcgtgcacaatggtggaggggtcatctttcgtcgtcggcggcggcggcggcgtgccgttcttcgagtggctcaagccgcggtcctcgccgccgccgtcgccgtcctcctcgtcgacgactacgacgtcatcgtccctcaccgcccaacgacaaccgcgtggtgctggtaccatgctgtgcttgcctcttcttggcaggctcggagaggagcccgttgatgctgacgatggcggggcgatgaacaatcctcctgtcaaggaagaggtgagcaatactacagacgactatgccggtgttgatctcaacatcggcttgccggcgacgaccggcgggggtagctctgaagatgcgcccatggatgaggatgaagaagacgatgatgacgacgaggaggaggagacggaggatgatgaggagaaagcagctgggcttgaggggtgcaaggtggaggagaaagaaagagagcaagtacatagcgagggatcgaagtattacgtgtccgtgggaggaggggaagatcagagcagcaacgccggcgatgtcgacgccggcgccgcctgccgtggccggcggtattggatcccgacgccggcgcagatactcatcggcccggtgcagttcgtctgccatgtctgcaacaaggccttcaatcgatacaacaacatgcagatgcacatgtgggggcacggtcgggagtacaggaaggggccggagtcgctcaaggggacgcaggcgacggcgacgctggcgatgctgaagctgccgtgttactgctgcgccgccggctgccggaacaacgtcggccacccgcgtgcgcggccgctcaaggacttccgcacgctgcagacgcactacaagcgcaagcacggcgccaagcccttcgcctgccgccgctgcgccaagccgttcgccgtcaagggcgactggcgcacccacgagaagaactgcggcaagcgctggttctgcgcctgcggctccgacttcaagcacaagcgctccctcaacgaccacgtccgctccttcggcggcggccacttccccgtcgccgccgccgccgccgccgcacatgcggcggcggcgccgcccaagcagcagcagcgaatcatacgcttcgacgacgcaatggcgcaaatgcatggcggcggattaatgaactaa</cdnaseq>

Protein Sequence

<aaseq>MVLRACTMVEGSSFVVGGGGGVPFFEWLKPRSSPPPSPSSSSTT TTSSSLTAQRQPRGAGTMLCLPLLGRLGEEPVDADDGGAMNNPPVKEEVSNTTDDYAG VDLNIGLPATTGGGSSEDAPMDEDEEDDDDDEEEETEDDEEKAAGLEGCKVEEKEREQ VHSEGSKYYVSVGGGEDQSSNAGDVDAGAACRGRRYWIPTPAQILIGPVQFVCHVCNK AFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLKLPCYCCAAGCRNNVGHPRA RPLKDFRTLQTHYKRKHGAKPFACRRCAKPFAVKGDWRTHEKNCGKRWFCACGSDFKH KRSLNDHVRSFGGGHFPVAAAAAAAHAAAAPPKQQQRIIRFDDAMAQMHGGGLMN</aaseq>

Gene Sequence

<dnaseqindica>239..919#1556..2044#aatctctcttccatctctctctttcttccagaccgtggcatgcacggcttgacacagacgctctcgtacgtcgtcgtcgtcgccgtcgtcctcctcgtcggcataaagcagtctccactgcaaaccagctagctgtagctctcaattcgtaggtgagatcgacgcgcatcgcgccgcgtctacgtttgtatatagagggggagagaggatcggaggagccgatcgagctgaagtagggatggtgctgagggcgtgcacaatggtggaggggtcatctttcgtcgtcggcggcggcggcggcgtgccgttcttcgagtggctcaagccgcggtcctcgccgccgccgtcgccgtcctcctcgtcgacgactacgacgtcatcgtccctcaccgcccaacgacaaccgcgtggtgctggtaccatgctgtgcttgcctcttcttggcaggctcggagaggagcccgttgatgctgacgatggcggggcgatgaacaatcctcctgtcaaggaagaggtgagcaatactacagacgactatgccggtgttgatctcaacatcggcttgccggcgacgaccggcgggggtagctctgaagatgcgcccatggatgaggatgaagaagacgatgatgacgacgaggaggaggagacggaggatgatgaggagaaagcagctgggcttgaggggtgcaaggtggaggagaaagaaagagagcaagtacatagcgagggatcgaagtattacgtgtccgtgggaggaggggaagatcagagcagcaacgccggcgatgtcgacgccggcgccgcctgccgtggccggcggtattggatcccgacgccggcgcagatactcatcggcccggtgcagttcgtctgccatgtctgcaacaaggccttcaatcgatacaacaacatgcaggtgattgattgcatcgatcgatacactacccatccatgcatgcatcttgattaacttggatgtctcgtccgtgagactccatgtcctcttttcttaattgttttgatcctcttataattaattaactatttcgagttcgagcatctctgtttggaattcttcttttctttttagatgttgcgtcttgcggatgctttcaataattatgcatcttaatattagtgcatatatacatcacgcgcgtgcatgctgtgtgtgtacacatgagaatgctcaattgcttatctccttttgctgttcttcgtcattcccgtttataccaagcaagtatttcatgtagacatgtaccccacatgacccgcaaggaatccaattaatgcatagaaaagcaaagagaaacaaaaccacgcaattcacatgcctttcctctctctctccagcatgatcaaaccaaggacagacacacatacacactaaacattaattagaacctgcctagaaattccatgttgtgcattgcacactgcatggctaattgcaaagcacgtggtaataattttcatatgccatgtacttatccaaagagatcaactaaactaatttggtgtgatacatatgcatgtatatgtattgcagatgcacatgtgggggcacggtcgggagtacaggaaggggccggagtcgctcaaggggacgcaggcgacggcgacgctggcgatgctgaagctgccgtgttactgctgcgccgccggctgccggaacaacgtcggccacccgcgtgcgcggccgctcaaggacttccgcacgctgcagacgcactacaagcgcaagcacggcgccaagcccttcgcctgccgccgctgcgccaagccgttcgccgtcaagggcgactggcgcacccacgagaagaactgcggcaagcgctggttctgcgcctgcggctccgacttcaagcacaagcgctccctcaacgaccacgtccgctccttcggcggcggccacttccccgtcgccgccgccgccgccgccgcacatgcggcggcggcgccgcccaagcagcagcagcgaatcatacgcttcgacgacgcaatggcgcaaatgcatggcggcggattaatgaactaacagtgttaattgttcttgatcgttagctagctatagctaattgcatgtacacttcccccttagtttacacacacacacacacccacacaaaatgcaataagattatggagctaggttgccgaggagaagctaaaggcagtgaagcagctgaattttcttctggatgatgaccggagtttgcatgcaatcgggggactgactgatcacataaggtttgttagttacccgtagcttggtaatttgcaaggaagaaaatttgtcagcttcacagcctaatgctggtttggcagccaaatgtatcaatgtatcactcgtgcatgacttaattttaagaagatctgttaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0444200, RefSeq:Os05g0444200