Os08g0372900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os08g0372900 |
|---|---|
| Description |
Similar to Rhodopsin (Fragment) |
| Version |
NM_001068196.1 GI:115476129 GeneID:4345408 |
| Length |
4088 bp |
| Definition |
Oryza sativa Japonica Group Os08g0372900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:17527600..17531687 |
| Sequence Coding Region |
17527740..17528125,17529574..17529858,17531158..17531653 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008401:17527600..17531687 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008401:17527600..17531687 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcaacaacaagctcgtcaaaaaccgccacgtgccctctctgccacgccgacgtgctgctgccacggcggcggtcagccggctcctcgacgcacagaagccacgacctcgacgacggccccgctccgccgtcgccggagtccagctgccgcagcaacgccgcggtgtgcgggtgcgcccgctgccggcgccctgatctgatcagtcccggaaccggcatgcggatgaggaacagattcggcgatggccccaacaggatatcagcccagagtggagcatggctgtgccgagagcgcacggcggagacttgccggagcacaagtagccggtccggccgctaccggcgcctgcagcctgcagcggtcgccggaacacgacgcgccgaactcataaagcggctgcaagagctctgccacccagcaaataaccttccaaattgttctgcttcttggcaaccacagcgacagcggcagaaaacaattgatcgaattccagatagcctagattgtggggtgacaatggaaaggggcaagaacaagcgtgatggaagtgacaatgggctcatcttctctaacctaatgcacggtgttgctgccggcatctatgggtatcctcctcaccagggatacactcaggctcagagctacctactgctgccggaagcatatccacctcctccgtggacataccctctttctagtgcttaccctcctcaacctgttggttacccttcaggtggctaccctcctgcagtctactctgactcgtatctgcaccaaggtagcagagttgcgcgggagcaatgccctctatcatattccaataatgctgtcacttgcagggaggatgggcaaatgaactgtgaaaatggaacagtaaatatggagaaaagtgcaatgtcctcaaataagatggctactagtctactaaagagttgcggcaatgtgatgccatgcagaaatatggagagaagtggcccagccatgtataaggtggacatgcgcggcagtacgaagcaattctctatgggcagcaagatgatgatgtgtctgattgtgtttggatgtctgatagctgccttggatatgtttagaaatgttgcacaaaaacagatgttttctgtcgttagtttactttcttttgtagtcgcgacctatgtctgctag</cdnaseq> |
| Protein Sequence |
<aaseq>MSTTSSSKTATCPLCHADVLLPRRRSAGSSTHRSHDLDDGPAPP SPESSCRSNAAVCGCARCRRPDLISPGTGMRMRNRFGDGPNRISAQSGAWLCRERTAE TCRSTSSRSGRYRRLQPAAVAGTRRAELIKRLQELCHPANNLPNCSASWQPQRQRQKT IDRIPDSLDCGVTMERGKNKRDGSDNGLIFSNLMHGVAAGIYGYPPHQGYTQAQSYLL LPEAYPPPPWTYPLSSAYPPQPVGYPSGGYPPAVYSDSYLHQGSRVAREQCPLSYSNN AVTCREDGQMNCENGTVNMEKSAMSSNKMATSLLKSCGNVMPCRNMERSGPAMYKVDM RGSTKQFSMGSKMMMCLIVFGCLIAALDMFRNVAQKQMFSVVSLLSFVVATYVC</aaseq> |
| Gene Sequence |
<dnaseqindica>3563..3948#1830..2114#35..530#ggtcttttccggccgctcccggcgcccgccggccatgtcaacaacaagctcgtcaaaaaccgccacgtgccctctctgccacgccgacgtgctgctgccacggcggcggtcagccggctcctcgacgcacagaagccacgacctcgacgacggccccgctccgccgtcgccggagtccagctgccgcagcaacgccgcggtgtgcgggtgcgcccgctgccggcgccctgatctgatcagtcccggaaccggcatgcggatgaggaacagattcggcgatggccccaacaggatatcagcccagagtggagcatggctgtgccgagagcgcacggcggagacttgccggagcacaagtagccggtccggccgctaccggcgcctgcagcctgcagcggtcgccggaacacgacgcgccgaactcataaagcggctgcaagagctctgccacccagcaaataaccttccaaattgttctgcttcttggcaaccacagcgacagcggcagaaaacaattgatcgaattccaggtaattgcgcgctttaaatttttcttgtttttgttttcagttttgatatttatcagatgctcgaggattattaggataagattgatttgtttagagtctttccttatatgtatatccccttcctcatcttttctactctctatatatatatccctcatgagactgaattcaatgcttaatatttatagtattcctctcttcttatactgttaaacatggtatcagagtgggacgatctagcgccgctcgaaagcttccgccccgctgcccgggggagcagcgatctcccaggggcagccaccgtttttctgattttgttaaactgttcggtttccactttaggtatagaatagtatttgtgggacgactgtacatggctgaaaaaaatagacaaattttgttgtgcaaattttatatgaactgcaaaataggaaactacagagggataaaattctataggtactgcaaaataggaagggaactagaaccacagttccaaaatttttagagctagtgacaactcttaggctatggctctgaaaattgcacgcagcatgaaagtttcagattgattgctagtataaatgctgttatcttgtatgtttacgccattggatccatcatatatagataatcatagtaaccttgtaagacaagtattcacatagatattgaatttgtggctattgctaatcatcatttgcattgtgaggtggttgaaaagagtgctgataatgttagaagttagcatcttatatggtctaaatgtcctgtttgatgcaaaagtaacagaaaattggttgagttactagagtatatttgaatgctgcatgctacctcctctatttaatttctcacacaataagattagatgttttggtgttttgaatagattcagcatggatgcattcatgcggttatccaaattcatatgaattaatactagtgaatctagactacgagatggagaggctaaaacatcttataatgtgtgaaatagaggaaatagatgtttagaactgtgtgcatttagatgaaatcattttcagtgcaaaacagaagatgcagtaacttaataaacaacccatcatataaagatatattttcttttagtttccttaagatattaaagcaataaattaattatcttctcaatcaagcttaagtgcaaaatatactccctacagccaaaaatctttgacgtacatcaaataaatctaaagtactactaaatcttgcttagcacaaaaaaccatggtctaaacaacagtgatggaccaacattttttttttgtgcagatagcctagattgtggggtgacaatggaaaggggcaagaacaagcgtgatggaagtgacaatgggctcatcttctctaacctaatgcacggtgttgctgccggcatctatgggtatcctcctcaccagggatacactcaggctcagagctacctactgctgccggaagcatatccacctcctccgtggacataccctctttctagtgcttaccctcctcaacctgttggttacccttcaggtggctaccctcctgcagtctactctgactcgtatctgcaccaaggtattaaactagattcttttatatactattaagatattgtactttgtataaacattgctgaaattcgctgataaaactaattaacctctattcactggagaaggtgctatcattttgcaaacaaaactaaagagtacaaaatcaaaaccaaagttcatgctattatagttgaaaacaaaaccaaaccgtacaaaagtacatactattagtaatgttagtagctaaccaaacaaacaaattcttaatttctaattaagaaaattaatattcctggatttcaagacaaaaaaatgaaacaaaatcctctagtgtgtcacaaaggttaaactaaagaatgtattacaaacataactgtgacacggctaggtagctgcccgtggttttgggaaatcgcttcatatatggtgcgctagttttcagaactgatctgtatttgtgcactgtttagctaacaaaactttgtattcttagtaccaaataaactaggtattactccctccgttaaaaataattatcatttcaaacgagtaaacggtctccaaaaagaactttgatcactatttttttattacagtatcatatctatagaaatgccaacaactatatatgattttcttgaagcacttcaattcgtgactatgagttggatgttattattttgatttcatctctctagaacttgtaaaaatatctatgcgggttggagcatgatttaaacttcattaattagtagtgcagccacaccatatatatatatatatatataatgtgcttgattatgtcgacgagttatatatgaaaggtatatatactagttaaagggttaattattggttttgtggattatcagttggcgttagtagtgacaattaagcttcagttcagtcgacatcaataattaatctcactcaggctctttcctcactcctagacatatggtcgattgtttttttttctgtacacccttaaatttgaaatgaactatgaaaagaattgattgatgttgtttagctaataaatcaataactgtatgggcagtacgcttaaggttgagtttgaatctacctcttcccatcttcgactccctagcttactcttcacgaactgttaagtgttgtttttttaaaaaaatctatatgaaagtagctataaaaatcatattaatttattttcaagttttttaagttaatacttaattaatcttgcacatattatacttaatgcaatgatcaactctctatacatattaatactaatgcaatgatcaactctctatacatattatagggaaaaaaattcaagcggtagcacctgtcttaaaccaacatgataaaaactgcagattgtctagcaccatgtagcaccatatatgtaaatcgatgaagcatggaaagaactgatcaactctcgcggcagaatctaaccgctgaaaattcgataatgtccaggtagcagagttgcgcgggagcaatgccctctatcatattccaataatgctgtcacttgcagggaggatgggcaaatgaactgtgaaaatggaacagtaaatatggagaaaagtgcaatgtcctcaaataagatggctactagtctactaaagagttgcggcaatgtgatgccatgcagaaatatggagagaagtggcccagccatgtataaggtggacatgcgcggcagtacgaagcaattctctatgggcagcaagatgatgatgtgtctgattgtgtttggatgtctgatagctgccttggatatgtttagaaatgttgcacaaaaacagatgttttctgtcgttagtttactttcttttgtagtcgcgacctatgtctgctaggagtctctacatgtaccgtaaaattgctctttgtgtaatgtgtacttcttcatcctgtaaaaatagaatcccaatcaaactatatatggtttgtctgtcgggctttcaatacaatctgagtgtcctctctttacctttgt</dnaseqindica> |
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