Os05g0445800

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0445800| Description = Conserved hypothetical protein| Version = NM_001062219.2 GI:297604589 GeneID:4338939| Length = 2675 bp| Definition ...")
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Gene Name

Os05g0445800

Description

Conserved hypothetical protein

Version

NM_001062219.2 GI:297604589 GeneID:4338939

Length

2675 bp

Definition

Oryza sativa Japonica Group Os05g0445800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:21885404..21888078

Sequence Coding Region

21885404..21885523,21885622..21886073,21886170..21886485,21886819..21888078

Expression

GEO Profiles:Os05g0445800

Genome Context

<gbrowseImage1> name=NC_008398:21885404..21888078 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:21885404..21888078 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggacgcgacgacggcgatgaccatcgacttcctccgcgcgcgcctcctctccgagcgctccgtctcccgcgccgccaaggagcgcgccgaccagctcaccaagcgggtggcggagctggaggagcagctacgggcggtgacggcgcagcgccggaaggcggagcgtgccgcgggggaggtgctcgccatcctcgagtcccagggcctcgcgcgcttctccgacgccgcggattccggttctggttccgacgatgaggacggcctcgagtccgccgagagcggcggcaaggctcgtggggaagcggaggatgcgctgtcggggtcagagcttggagacactgttaatgcggcggcggcggcggcggccggggggctgtcgtggaagggccgcgccgtgagccacgagtcgcagaggcggcagcagcagcaactgaaaggcaggcatctcaggcagaggaatagccataggagaggctacttttacttgctggccgcggattcgtcgcccaagtaccagccggggcaatcgtgccggaaggtcaagaggaaggagctgaggtttcatactgaaggaaacgaggggaaggacaatgccatggaaagtactgaggaggggcaggagagatcagattgtactgtctgtactgatgagcagcctgatattgatggtgaggtgagccaagatgggcagggctcttgtggcgatggaagagacggagataatgacgatcgatattctgtggagtatgagaaggatggggagatggagagagttcttgaaaagcaagcagagttaattgggcaatacgaggcagaagaatatgctcagagggagtgggagaagaaattcaacaattgccgagattcaactgcgggtgatgttgagctaggcaataaactaaatcaaattgaaaaggcttgtgagcagagggacagagctgctcagatcaaggataaagaagtttctgaagtgggagggccaagtgacaaaaatctctttgccgatgacagcccctctgaatgtttgtcaactgattctgttttcggactgcccccaaatgcaccagaagaaaatgctattaagcattgcaaagttactgagtgtgatcatgattttggggaagctacttcaacagttgtttcagttgatagtggcccacaggctaggaaggatgagtcggtaaacaaaagtttcactgaaattattgaaggaagtgggaataatatagcgaaatcgtcctcttcactacaaggaaactacgatagcagccaaaatgcaaggcataatgaagatcaggtagatgaaagctcagacagtggtccaggctaccatgtaaatgcttgctcttatgagcactacatcaacacaccatcagtcgcaagccgatcaagtgacacccctaaaagcaaagtctctgaatggagctcatcatgctttcacaaccacactgataaccagattgacacacagatgcatcaaccttcaagtgatggtgtgggaggtgttttggaggcccttcaacgtgccaagatgtcccttagagaaaagctgagcaaaccaagtccacctagcctggaaatgttggcacttccagcaccagagtatcactacgcaacggatgattcgccagtcagagacacagagctttcactttgcatgtcaacgtttcctagccaggaaatattggcgctaccagaaccagcagagtatcgtagcaggatcataccacgggatgacgtgaaagtgccggtgggacttgctggtttgttccggttgccaacagactcttttgctcaaaatgagttgtgttcagctgatggctatcgttcaaggttcagtttgacagcaacaagtcgggaaaacctctcaaatcatttcagggcaaatctgtcactttcacgatatggctccgagtcctcaccggatccttgtttcagcgctcgtaattctatgttgctgtcgacaccaacttttggtggatgtagcaacccagtgtcagatttcagagtaggcgacgcttatttcccctctgaagttccaaggtctagcaatagaagagggatgccttctggagatcaagggatgctgttccattatgctggcgattacagctcgaataagtggacgttatag</cdnaseq>

Protein Sequence

<aaseq>MAAAADATTAMTIDFLRARLLSERSVSRAAKERADQLTKRVAEL EEQLRAVTAQRRKAERAAGEVLAILESQGLARFSDAADSGSGSDDEDGLESAESGGKA RGEAEDALSGSELGDTVNAAAAAAAGGLSWKGRAVSHESQRRQQQQLKGRHLRQRNSH RRGYFYLLAADSSPKYQPGQSCRKVKRKELRFHTEGNEGKDNAMESTEEGQERSDCTV CTDEQPDIDGEVSQDGQGSCGDGRDGDNDDRYSVEYEKDGEMERVLEKQAELIGQYEA EEYAQREWEKKFNNCRDSTAGDVELGNKLNQIEKACEQRDRAAQIKDKEVSEVGGPSD KNLFADDSPSECLSTDSVFGLPPNAPEENAIKHCKVTECDHDFGEATSTVVSVDSGPQ ARKDESVNKSFTEIIEGSGNNIAKSSSSLQGNYDSSQNARHNEDQVDESSDSGPGYHV NACSYEHYINTPSVASRSSDTPKSKVSEWSSSCFHNHTDNQIDTQMHQPSSDGVGGVL EALQRAKMSLREKLSKPSPPSLEMLALPAPEYHYATDDSPVRDTELSLCMSTFPSQEI LALPEPAEYRSRIIPRDDVKVPVGLAGLFRLPTDSFAQNELCSADGYRSRFSLTATSR ENLSNHFRANLSLSRYGSESSPDPCFSARNSMLLSTPTFGGCSNPVSDFRVGDAYFPS EVPRSSNRRGMPSGDQGMLFHYAGDYSSNKWTL</aaseq>

Gene Sequence

<dnaseqindica>1..120#219..670#767..1082#1416..2675#atggcggcggcggcggacgcgacgacggcgatgaccatcgacttcctccgcgcgcgcctcctctccgagcgctccgtctcccgcgccgccaaggagcgcgccgaccagctcaccaagcgggtgcgcgcgtgtgctgcacccgtcgctacgctagctaactctccctctcgaccgcattttctctccggctcacggcggtgtcgctgctgctgctgcaggtggcggagctggaggagcagctacgggcggtgacggcgcagcgccggaaggcggagcgtgccgcgggggaggtgctcgccatcctcgagtcccagggcctcgcgcgcttctccgacgccgcggattccggttctggttccgacgatgaggacggcctcgagtccgccgagagcggcggcaaggctcgtggggaagcggaggatgcgctgtcggggtcagagcttggagacactgttaatgcggcggcggcggcggcggccggggggctgtcgtggaagggccgcgccgtgagccacgagtcgcagaggcggcagcagcagcaactgaaaggcaggcatctcaggcagaggaatagccataggagaggctacttttacttgctggccgcggattcgtcgcccaagtaccagccggggcaatcgtgccggaaggtcaagaggaaggagctgaggtccatgcactgaaaattacccaaatttgcgataattgttcatccctatctgcgcattgctaatctgacataaatgtagctgtactgcattttcaggtttcatactgaaggaaacgaggggaaggacaatgccatggaaagtactgaggaggggcaggagagatcagattgtactgtctgtactgatgagcagcctgatattgatggtgaggtgagccaagatgggcagggctcttgtggcgatggaagagacggagataatgacgatcgatattctgtggagtatgagaaggatggggagatggagagagttcttgaaaagcaagcagagttaattgggcaatacgaggcagaagaatatgctcagagggagtgggagaagaaattcaacaattgccgagattcaactgcggtatgcactgtccttctcaatctcacaaaatgctgtttcatataggcataagatctgtttaacaaaataacaaaatatcatgtatttggtggttcagggttattttagcttcttagatggatgccaatatgctgataaccatataatttcttttgttagagatacttgctgtcgatgtttttatctgtatacttgctgtcaatatagtaaaccaaacaattttccttaactttgtttttctcgaagctgttgaacttgtagttgactggataaaaattaaaatatctaaaattattgttattttgacttgtacatttgtgttctgatttccagggtgatgttgagctaggcaataaactaaatcaaattgaaaaggcttgtgagcagagggacagagctgctcagatcaaggataaagaagtttctgaagtgggagggccaagtgacaaaaatctctttgccgatgacagcccctctgaatgtttgtcaactgattctgttttcggactgcccccaaatgcaccagaagaaaatgctattaagcattgcaaagttactgagtgtgatcatgattttggggaagctacttcaacagttgtttcagttgatagtggcccacaggctaggaaggatgagtcggtaaacaaaagtttcactgaaattattgaaggaagtgggaataatatagcgaaatcgtcctcttcactacaaggaaactacgatagcagccaaaatgcaaggcataatgaagatcaggtagatgaaagctcagacagtggtccaggctaccatgtaaatgcttgctcttatgagcactacatcaacacaccatcagtcgcaagccgatcaagtgacacccctaaaagcaaagtctctgaatggagctcatcatgctttcacaaccacactgataaccagattgacacacagatgcatcaaccttcaagtgatggtgtgggaggtgttttggaggcccttcaacgtgccaagatgtcccttagagaaaagctgagcaaaccaagtccacctagcctggaaatgttggcacttccagcaccagagtatcactacgcaacggatgattcgccagtcagagacacagagctttcactttgcatgtcaacgtttcctagccaggaaatattggcgctaccagaaccagcagagtatcgtagcaggatcataccacgggatgacgtgaaagtgccggtgggacttgctggtttgttccggttgccaacagactcttttgctcaaaatgagttgtgttcagctgatggctatcgttcaaggttcagtttgacagcaacaagtcgggaaaacctctcaaatcatttcagggcaaatctgtcactttcacgatatggctccgagtcctcaccggatccttgtttcagcgctcgtaattctatgttgctgtcgacaccaacttttggtggatgtagcaacccagtgtcagatttcagagtaggcgacgcttatttcccctctgaagttccaaggtctagcaatagaagagggatgccttctggagatcaagggatgctgttccattatgctggcgattacagctcgaataagtggacgttatag</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0445800, RefSeq:Os05g0445800