Os09g0547300

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0547300| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001070384.1 GI:115480510 GeneID:4347768| ...")
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Gene Name

Os09g0547300

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001070384.1 GI:115480510 GeneID:4347768

Length

5857 bp

Definition

Oryza sativa Japonica Group Os09g0547300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22462512..22468368

Sequence Coding Region

22462918..22464547,22464630..22464775,22465368..22465591,22466724..22467483

Expression

GEO Profiles:Os09g0547300

Genome Context

<gbrowseImage1> name=NC_008402:22462512..22468368 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22462512..22468368 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcgggcagtcgaagatggaggaggagtacgcggtgcggcactgcagggagaggtcggagctgctcgccctcgccatccgccaccgctacgcgctcgccgacacccaccgtgcctacgccgaatccctcgccgccgtcggcgccgtgctccacgacttcctccgcggcgtccagtcgctgcccccgccgccgctcgagcccacgctccgccttcccgcccaccgcaagggcgacaacctccccaccgcctcccccgtcccggccaaccccgccatcgcctcctcctccgccgcccagccgctgccgcccgtcgccaagcaggtacgaatcgccgccgcccccgatgacggcggcggcggcggccacatccacttctcggacgacgactccgattccgagggcggcgggcacatcaagttccactccgacgacgagggcgacgcgcccgctcaccgccgcccagagatcgtccgctccgccgcgccgccggtggctccgccgccgcagatggggccaccaccaccgtatggctccggatatgctcctcctccgccttatggttcgggatacgggtatggatacggccccgcccccgattacggcggcggcatggccgttgccaacggcggctatgacccagggtatggtggtatgggcggagccagtggcggcggcggcggcggcggctatgcgcctggatatggaggcatgggagttggggatggcggcagcggtggcggctatgagccagcctatggcggcatgggcagctatggccaaagcttcttcaacatcagctatgcgcgcagccagccgcctccgccgtccgtctcatacgagcaccggctgcaggccaccgatgccagggtccactactacgccggagaaggcaaccctcaagcacccccactcgggtatggcggtgggtatggttatccgccgcagggctcgagctcttacaaccagtatgcgtacggtggttactatggtggtgcttctcctccgcctccggccgatataccttctacctcccgcggggaggttacgccaccggcacctccatctccgccgagggtgtctacttgggacttcctgaacccatttgaaacctatgagagctactatgagcagccaactgctgctcaagcgtcatacactcccagcagaagttccaaggatgtgcgtgaggaggaaggcataccagatttggaggatgaggatatggaggtggttaaggaagcttatggtgatgagaagcacgccgccaatgggtacagtggcaaggggaagatggcaaaagaggaaggtggtaggagcagcaccggggatgaactgccccatgaatccaagttatcggaagcgagcagtagcgggagcaaccaggagcatgatgtccatgtagtggagaagagtgttgtgggagaacaggtgcagcggtcagagcctcgtcagcatgtcgcaggcctgccgcccataggatcggagaagacgtactttgatgatgctgaggtggtgctggagatcaggactcaattcgagcgtgcctcaaaatctgccattgaggtgtccaagatgcttgaggttgggaagatgccttactacccgaagagttcaggtttcaaagtgtctgcgatgatgatttgcgggataccaacaatggaggaagagttcctgcggtttgaagaagacaaggcgatggggtgtggcaatctttcctcaacactgcagaaactgtacatgtgggaaaaaaagcttcttgaggaagtcaaggctgaggagaagatgcgggcgttgtatgacaggcaacgtgaggagctgaaaatattagatgagaaaggtgcagaagctgataagcttgaggctactgaaagatccatcaggaagctatcaacaaagataagcatagcaattcaggttgtcaacactatctcagacaagataagtaagctgagggatgaagagttatggccgcaaacatgtgagctcatccaagggttgatgcggatgtggagcactatgttagaatgccatcagatccaattgcatgccatatcccatgctaaaaacatagattccatgataaacggtgcaaagtttggtgaagctcacatggacttgatcaagcgcctagagcttcagcatttggattggatagcctcttttgcctcatgggtgaatgctcaaaaaagctacgttggtactttaaatgactggttgaggaaaggagtcacatatgaacctgaggtaactgatgatggtgtgcctcctttttctcctggacggctaggagcgccacctatttttgtcatatataacaattgggcagttggtgtggggaggatatctgagaaggaagtagttgaggcaatgcaggcctttgcatctaatgttcttggcctctgggaaaggcacaggtcagagcaaagacaaggtcttatggctaataaaggtatggacaaggaccttagggtgatggaaagggatgaacagtcgatgcgcaaggctctggaagcacaaaataagaagctggtgctcatttctaatcagagcggtgtatccttatcagcacaagcacaggccttacaagatggaggttcccatggtgatactggtagtttgcaactaagtctgaagaatatttttgaagcaatggagaacttcaccgccaactctgcaaacacctacaaggatctccacctgcgtgctgaagaagagaaagctcgcgttgcccaagagagttgcagagtttcctag</cdnaseq>

Protein Sequence

<aaseq>MGCGQSKMEEEYAVRHCRERSELLALAIRHRYALADTHRAYAES LAAVGAVLHDFLRGVQSLPPPPLEPTLRLPAHRKGDNLPTASPVPANPAIASSSAAQP LPPVAKQVRIAAAPDDGGGGGHIHFSDDDSDSEGGGHIKFHSDDEGDAPAHRRPEIVR SAAPPVAPPPQMGPPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGGYDPGYG GMGGASGGGGGGGYAPGYGGMGVGDGGSGGGYEPAYGGMGSYGQSFFNISYARSQPPP PSVSYEHRLQATDARVHYYAGEGNPQAPPLGYGGGYGYPPQGSSSYNQYAYGGYYGGA SPPPPADIPSTSRGEVTPPAPPSPPRVSTWDFLNPFETYESYYEQPTAAQASYTPSRS SKDVREEEGIPDLEDEDMEVVKEAYGDEKHAANGYSGKGKMAKEEGGRSSTGDELPHE SKLSEASSSGSNQEHDVHVVEKSVVGEQVQRSEPRQHVAGLPPIGSEKTYFDDAEVVL EIRTQFERASKSAIEVSKMLEVGKMPYYPKSSGFKVSAMMICGIPTMEEEFLRFEEDK AMGCGNLSSTLQKLYMWEKKLLEEVKAEEKMRALYDRQREELKILDEKGAEADKLEAT ERSIRKLSTKISIAIQVVNTISDKISKLRDEELWPQTCELIQGLMRMWSTMLECHQIQ LHAISHAKNIDSMINGAKFGEAHMDLIKRLELQHLDWIASFASWVNAQKSYVGTLNDW LRKGVTYEPEVTDDGVPPFSPGRLGAPPIFVIYNNWAVGVGRISEKEVVEAMQAFASN VLGLWERHRSEQRQGLMANKGMDKDLRVMERDEQSMRKALEAQNKKLVLISNQSGVSL SAQAQALQDGGSHGDTGSLQLSLKNIFEAMENFTANSANTYKDLHLRAEEEKARVAQE SCRVS</aaseq>

Gene Sequence

<dnaseqindica>407..2036#2119..2264#2857..3080#4213..4972#actaacctagttagccactctattactactacctccgttgccaacgccggaatccatccatccatccccgcgccgcgctgtgccgccgcgagagctttgcggcgggcatgcgggtggggattcaccgcggggtggaagaagctgaagcagcagctggtggcgcaacgccacgaggcgcaccccgctggcacccacaccaacaaaaggagaagattctcgccaccaccactcccactgatcccctcttcttcctcctcgttcgcctgccatctccggagccggaggaggaggaggagtagccgccgcccagatctgcgccgccatgctgccgctgctgcggaggcggcggctgtgaatagctaggtcgtttttattgttgtttttgggttggtttggtttgattccgatggggtgcgggcagtcgaagatggaggaggagtacgcggtgcggcactgcagggagaggtcggagctgctcgccctcgccatccgccaccgctacgcgctcgccgacacccaccgtgcctacgccgaatccctcgccgccgtcggcgccgtgctccacgacttcctccgcggcgtccagtcgctgcccccgccgccgctcgagcccacgctccgccttcccgcccaccgcaagggcgacaacctccccaccgcctcccccgtcccggccaaccccgccatcgcctcctcctccgccgcccagccgctgccgcccgtcgccaagcaggtacgaatcgccgccgcccccgatgacggcggcggcggcggccacatccacttctcggacgacgactccgattccgagggcggcgggcacatcaagttccactccgacgacgagggcgacgcgcccgctcaccgccgcccagagatcgtccgctccgccgcgccgccggtggctccgccgccgcagatggggccaccaccaccgtatggctccggatatgctcctcctccgccttatggttcgggatacgggtatggatacggccccgcccccgattacggcggcggcatggccgttgccaacggcggctatgacccagggtatggtggtatgggcggagccagtggcggcggcggcggcggcggctatgcgcctggatatggaggcatgggagttggggatggcggcagcggtggcggctatgagccagcctatggcggcatgggcagctatggccaaagcttcttcaacatcagctatgcgcgcagccagccgcctccgccgtccgtctcatacgagcaccggctgcaggccaccgatgccagggtccactactacgccggagaaggcaaccctcaagcacccccactcgggtatggcggtgggtatggttatccgccgcagggctcgagctcttacaaccagtatgcgtacggtggttactatggtggtgcttctcctccgcctccggccgatataccttctacctcccgcggggaggttacgccaccggcacctccatctccgccgagggtgtctacttgggacttcctgaacccatttgaaacctatgagagctactatgagcagccaactgctgctcaagcgtcatacactcccagcagaagttccaaggatgtgcgtgaggaggaaggcataccagatttggaggatgaggatatggaggtggttaaggaagcttatggtgatgagaagcacgccgccaatgggtacagtggcaaggggaagatggcaaaagaggaaggtggtaggagcagcaccggggatgaactgccccatgaatccaagttatcggaagcgagcagtagcgggagcaaccaggagcatgatgtccatgtagtggagaagagtgttgtgggagaacaggtgcagcggtcagagcctcgtcagcatgtcgcaggcctgccgcccataggatcggagaagacgtactttgatgatgctgaggtggtgctggagatcaggactcaattcgagcgtgcctcaaaatctgccattgaggtgtccaagatgcttgaggttgggaagatgccttactacccgaagagttcaggtttcaaaggttcgtacagtcagatctcatatgctattcttttgcagttttcaaatatgagttctaatttgacccccaattgccaatatagtgtctgcgatgatgatttgcgggataccaacaatggaggaagagttcctgcggtttgaagaagacaaggcgatggggtgtggcaatctttcctcaacactgcagaaactgtacatgtgggaaaaaaagcttcttgaggaagtcaaggtatgtaatatatgcttggaatttgttgggaatgatttgattcatgtgattcttttgagcatgttatctttcctttttttacacctgcatgttggtagatcctgattggtagtgcagaatccagtccagtgaatatctggatttgtccattctctatgatattggctgatcctttttataaattccagcttcttttaaaggaagaaacgttgtttggttggtgacttttcaatgttttagtggatcaagtagctatcaggaaaaactgcatttcatttctggatggatatgtctactctaatacttagttataagtttttctatttgttatagggaaatattggccttcattcgaatgactgctgccaccatgttttccctccacaagaatcgatctcttccgttttcataccttattggctttatgcttttggcttctagtttgttgttcttactcctaggaatttagtatggcatgtaacacaatgcttttatttcgtcatccttatgggtccacgatttaaatgctatgcatttttccatttatccaattttagattgggcttactcaagtattgtttgcgtattacaggctgaggagaagatgcgggcgttgtatgacaggcaacgtgaggagctgaaaatattagatgagaaaggtgcagaagctgataagcttgaggctactgaaagatccatcaggaagctatcaacaaagataagcatagcaattcaggttgtcaacactatctcagacaagataagtaagctgagggatgaagagttatggccgcaaacatgtgagctcatccaagggtatgcagttatcccttatggcaactttgactttcatatgttagcagcacatagtaaagtaatatctgctgtctgtattctgcttttcttggcacatgattttctaaacctattatctacagttattagcatgtttagcttctgcatagctaattaacttctatctgtggttttttttttctaaaatattgtttagttccattgactgtaattttaaggatgagttgtgtgtagtggaaaaataagttgcccaactgtccaaggttttgtttggtgttattttttttggcagaacgatctttagtgacaggaattagttaattctgtcaagtattctcatcagaccttcggtatggtgaattttctgagaaactctagttgcagaaagctcatgtctaggggtgcattgcattcttcaggtagcagccatggcctatagacatagatataaatagtgtgaactggtatagaacctatcactttacatgtagttttctgatgtattcttaatttttgtacttagccaatttaaaatcctaaaacacacggctggatttgatgcgtatggtcatgtagccatgtagcccctttgtgccgcaacgtaagtttgtcgtgaaacttgtattttcacctttgtgctgcaacataagtttgtcgtgaaatttgtattttcacaaggtaagcccgtcgaggattatacatttcatatgcataccccacctgtaaaattggaagagtagtcatttatgctgccatttcataggggcgtttgatggtccaatgctattcattttttatcactaaatttagcaccttcatagaggcgtgtcatgggcttggaccattttttggatggctggattgccaggataattacctgcctgtggttatgtgccaaaaggattggctgccatttgcttagtctttctgtggttgtgtttttacatactgttctatcctattattagcagccagcccaatgaaatttgtatatacattgggttgtgtgctgttaagatactaagttagcacctatgcatctttgtttgcacccagaattctctgattgtctgagtgctggctttgatacttgctatggatcatttctcaactaaaaaataacaattttcaggttgatgcggatgtggagcactatgttagaatgccatcagatccaattgcatgccatatcccatgctaaaaacatagattccatgataaacggtgcaaagtttggtgaagctcacatggacttgatcaagcgcctagagcttcagcatttggattggatagcctcttttgcctcatgggtgaatgctcaaaaaagctacgttggtactttaaatgactggttgaggaaaggagtcacatatgaacctgaggtaactgatgatggtgtgcctcctttttctcctggacggctaggagcgccacctatttttgtcatatataacaattgggcagttggtgtggggaggatatctgagaaggaagtagttgaggcaatgcaggcctttgcatctaatgttcttggcctctgggaaaggcacaggtcagagcaaagacaaggtcttatggctaataaaggtatggacaaggaccttagggtgatggaaagggatgaacagtcgatgcgcaaggctctggaagcacaaaataagaagctggtgctcatttctaatcagagcggtgtatccttatcagcacaagcacaggccttacaagatggaggttcccatggtgatactggtagtttgcaactaagtctgaagaatatttttgaagcaatggagaacttcaccgccaactctgcaaacacctacaaggatctccacctgcgtgctgaagaagagaaagctcgcgttgcccaagagagttgcagagtttcctagttcctttcgtggtttccatgttacatgagggcatgagccctttttaacgcaaaggagctgactgcagtggttcagatgagcactatagtttgcatggcagcgtcacaattcaagtggcaagtgatgcaccttgcatgaaatagcttctacccagggctgcgggctgccagacaaacctgtggcgtaaatggagacttgctagattgtgtttttttgaattggagcaacactcctcatgccatacagcccaggaactcaattttgctaatagctgaatcacaagacattgccgataggggaagaaaaatctgaagtggcgagtgacaagattcactcaatgttgggaaatcccagtaaatagttggaagatgtaagctgcataaacgaaatgcatggtctaagcatggagcagtaaaatgttccgatcatgagtccaagattcatgaagttgtatccatccatatgaaatagtcaaatgtgatcatgctgccaggttcagggaaagagtcactggaagagtgcaacaatgctagcatgccagtgtacatagttgaaggcaatgcgatatgggatgaaccaaagctgatgctgtgggagatgcttccctcccagctgggaggctgcagcctagctagttcacctgttaggggagtgatggatgatgatgagcttgtaggatagagaaaaaaagtggatgccctgaccccgttctgcagttcactaactgttggatttttttgttccgttatttattatacatataattcatttgtatccctgtacagccggtggctaactcataaacccccccttttttgtgtcatgtttattctatttctcccccatcgactttgcctgtttctgcttctctctcttttaatcgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0547300, RefSeq:Os09g0547300