Os08g0404250

From RiceWiki
Revision as of 20:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os08g0404250

Description

Similar to Chloroplast 50S ribosomal protein L27 (Fragment)

Version

NM_001188640.1 GI:297726410 GeneID:9271228

Length

777 bp

Definition

Oryza sativa Japonica Group Os08g0404250, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:19392757..19393533

Sequence Coding Region

19392757..19392835,19392949..19393070,19393297..19393533

Expression

GEO Profiles:Os08g0404250

Genome Context

<gbrowseImage1> name=NC_008401:19392757..19393533 source=RiceChromosome08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008401:19392757..19393533 source=RiceChromosome08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcggtctacactagcgcagcagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcggagagaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagccattgtaa</cdnaseq>

Protein Sequence

<aaseq>MAFSSVFRRGNVKELISNVSVYTSAAESSGGLSLIFKRWATKKT AGSTKNGRDSNPKYLGVKKFGGEKVEPGNIIIRQRGTRFHPGNYVGMGKDHTLFCLKE GHVRFERNKLTGRKWVHVDPVAGHVLHPVYASDSTPAAEMEPL</aaseq>

Gene Sequence

<dnaseqindica>1..79#193..314#541..777#atggctttttcatcagttttcaggagaggaaatgtcaaagaattgatctcaaatgtttcggtctacactagcgcagcaggtaatggctttggctttaggcagtctgagactcttgactgacttgagtctgtatttgtgctattttgaataaggtgcttggctgtttgaatgacaaaatatacctcattgcagagtcatctggaggattgagcttgatttttaagcgttgggccaccaaaaagacagctggatcaacaaaaaatggccgtgactctaaccctaagtatttgggtgttaaaaagtttggcggagaggtacaatcttgtgatctgtcatatgactttcatgtttttttattgtttatgacagcacaaagtactttctttaatcacgtaaaagtaatcagacttcggagatttgtgtgtcccttctgatcccgtacctgaactcctgaagcaacttgtcatttttgttattagaacaaaaaggtgaaaaagatctaaactgttcctgaacatcagcatttgcatcatttttcagaaagtggagccaggaaacatcatcatccgccaaagaggaacccgcttccatcctgggaactacgttggcatggggaaggaccatactctcttctgtctgaaagaaggacatgtgcgattcgagcgcaacaagctgactggcaggaaatgggttcatgttgatcctgttgctgggcatgtgctccaccctgtctacgccagtgattcgacccctgcagctgaaatggagccattgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os08g0404250, RefSeq:Os08g0404250