Os09g0245500

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Revision as of 07:18, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0245500| Description = Similar to Flavonol synthase-like protein| Version = NM_001069193.1 GI:115478125 GeneID:4346490| Length = 3508 bp| ...")
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Gene Name

Os09g0245500

Description

Similar to Flavonol synthase-like protein

Version

NM_001069193.1 GI:115478125 GeneID:4346490

Length

3508 bp

Definition

Oryza sativa Japonica Group Os09g0245500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:3970089..3973596

Sequence Coding Region

3970232..3970360,3970460..3970549,3970632..3970712,3971277..3971323,3971510..3971529
,3971650..3971809,3971919..3971977,3972472..3972539,3972623..3972686
,3972807..3972925,3973052..3973167,3973409..3973442

Expression

GEO Profiles:Os09g0245500

Genome Context

<gbrowseImage1> name=NC_008402:3970089..3973596 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:3970089..3973596 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttctgacttcaaggcaatccccttgatcgacattagtccccttgtcggaaagattgatgatccgagcatggtcaatgacgaggatttgctgcaagttgtgcaaatgttggacgatgcctgcagggaggctggattcttttatgtgaaaggccatgggattgctgactcgctaatgaagcaagttagggatgtgacacagaagttctttcagcttccttatgaggaaaaactcaagattaaaatgacacctcagagtggatacagagggtaccaaagagttggtgaaaatattaccaagggtaaacctgacatgcatgaagcaattgattgctacacgcctattgaacctggtaaatatggagaccttgctaaaccaatggtaggatctaatttgtggcccaaatatccatcaaattttgatgtactgctggaaaactatatcagccttctaagagatctttcaagaaagatcatgcgaggtatagccttggcgttgggtgcgccagttgatgcttttgaaggtacaaccgcaggagatcctttttgggtttgcaggctgatcggttatcctgtatcaactgatattccagaagagcagcgcactgatactgggtgtggagctcacacagactatggtcttctgacattggttaatcaggatgatgacatatgcgcccttgaggtcagaaaccaatcaggtgaatggatatatgccaaaccaatcccaggaaccttcgtctgcaacatcggtgacatgctgaaggtttggtcaaacggaatatatcagccaacacttcatcgagttgttaacaactcccctcgctaccgtgtatctgttgcattcttctatgagtcaaacttcgatgctgccgtagagcctgttgagttctgccgggagagaacaggtggtgttgccaagtatgaaaaggttgtgtacggagaacacttggttcagaaagtcttgacaaacttcgtcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MGSDFKAIPLIDISPLVGKIDDPSMVNDEDLLQVVQMLDDACRE AGFFYVKGHGIADSLMKQVRDVTQKFFQLPYEEKLKIKMTPQSGYRGYQRVGENITKG KPDMHEAIDCYTPIEPGKYGDLAKPMVGSNLWPKYPSNFDVLLENYISLLRDLSRKIM RGIALALGAPVDAFEGTTAGDPFWVCRLIGYPVSTDIPEEQRTDTGCGAHTDYGLLTL VNQDDDICALEVRNQSGEWIYAKPIPGTFVCNIGDMLKVWSNGIYQPTLHRVVNNSPR YRVSVAFFYESNFDAAVEPVEFCRERTGGVAKYEKVVYGEHLVQKVLTNFVM</aaseq>

Gene Sequence

<dnaseqindica>3237..3365#3048..3137#2885..2965#2274..2320#2068..2087#1788..1947#1620..1678#1058..1125#911..974#672..790#430..545#155..188#gctatcgcagcaatccaaaatccccaacccaacccaacccaacccaaccgcactatcacgccactcttcgcccgcccgcccgccgccggaatcgccatcgcccgaccgccgccgcgttcgtgtccccacaggcggcttctctccctgcatcaccatgggttctgacttcaaggcaatccccttgatcggtaagattcagattcagattctggaatcctgcgtgggattcttttttttcttttacctgctttgccaccaccagttgcagttagttcaattaaccacagattacgactgcttgtctgcaaaggatactagatacagcttttgtagaattttgtgtaaagatacttggtgggatgagatgatatatgcttgtactttgaaatctccatttgaagaattcctctatctttgttcatttgtcagacattagtccccttgtcggaaagattgatgatccgagcatggtcaatgacgaggatttgctgcaagttgtgcaaatgttggacgatgcctgcagggaggctggattcttttatgtggtaaaatttacttatttacttactagcctacttcagactttttagcatcagtttactacaatgggtacagcagactagctacacaatatcaatcctaatcaaatggtgtctgtatgttactaacagaaaggccatgggattgctgactcgctaatgaagcaagttagggatgtgacacagaagttctttcagcttccttatgaggaaaaactcaagattaaaatgacacctcagagtggatacaggtgtgatataaaatgacagcttcaacctgtttttaagtttccaacatttttccttgttccacattggatccttctaatcctccttcctgtataacataactttgttgtctttactgtcagagggtaccaaagagttggtgaaaatattaccaagggtaaacctgacatgcatgaagcaattgatgtaagtttaattttctctttattatttttttatcatccattaatttgttcctgagttaatccctggaagaaaaaacatcacagtgctacacgcctattgaacctggtaaatatggagaccttgctaaaccaatggtaggatctaatttgtggtatgtatccaactctccatctctgtttttttcctacagcactgtattatttgacatatgcgagacagatattatgtacttgactttgatataaaacaataccccagttttgatctattgcatattttaataatactcacaatataaataatttagcttatagcacacctctatttggaagaatgtgagggaataaaatttatatttacaatattttatctagtaccaacatgtattatgttacaatatgggtagaattatgaattatagtaaagaaaatagaagttatggctacaattgtacttgcatacttcaatgtatttttgttactagaagcatattaaatagttggtactaggtaccacagaattattgcttgttgaattacttcagctattactgaagaagttctgaactttggtagactgcctttgagtattttaggtcagagatctatcaaaattcaaataaccggttcatttatttttatgcaggcccaaatatccatcaaattttgatgtactgctggaaaactatatcagccttctaagaggttaacttctatacttagtttaaatctttatttgtgcatgtatgctattgatccatttattatttgttacttatgagtgacagcatttgttatgaaaatttacttgtagatctttcaagaaagatcatgcgaggtatagccttggcgttgggtgcgccagttgatgcttttgaaggtacaaccgcaggagatcctttttgggtttgcaggctgatcggttatcctgtatcaactgatattccagaagagcagcgcactgatactgggtggtgagcaaattgtatctacgtttttatttggtaatatatcctgcaaatcgtgtgtattgagtgtagagtcatctgacactgcttttcttttacatggcatccattctacgatcaattcagtggagctcacacagactatggttagtacatatctttcaaaagttctgttggaattgaactcatatgtggaaatacgcatatatgtttctttgattgatgtattgtggaaagtttgttttttctttatttgtgttttaatcctaaaaaatcagtagaggttatatcaaaaccatggggatcatatttatcatttgttaaatttgtaggtcttctgacattggttaatcaggatgatgacatatgcgcccttgaggtacttatttcttcaccatctaatacatatcttataggaataagtcatgtctttgccctcgaactctactcagattccaattttcaatgtggatttaaaaaactggttgtttatcaccagaaatctggacaaatatcattggttaccctattcagagattgttttaattgagatattttatggccacactgtttgtttgcttggtggccttttctccttgcaatttcttatcgccaaagttatttccatgttatctctgtctagtaataaagaagaggggacgtagaatggatagaagataagaacttgatttcagattgttttatttttcattagagtgcagtgcatctgagctgggcatctttgtacagaatttgactcatataacctaacaagagatacttctctacttttctaacattctacgcatcttctaagatgcattagtaattaggagtatgcaattagcatcttacagtttcttcccactgtccatatttagcctgaaacagggtgaagcaaacaattttgatccgtttgtaatatctggtgaatatgtttcaggtcagaaaccaatcaggtgaatggatatatgccaaaccaatcccaggaaccttcgtctgcaacatcggtgacatgctgaaggttcttttcttcctttgcagtttcactgatatctttatggtcatcaaacatgagacgcttatcaattgtcttctttggttaggtttggtcaaacggaatatatcagccaacacttcatcgagttgttaacaactcccctcgctaccgtgtatctgttgcattcttctatgaggtatgtcttgcttaatctctagtctcaatcctacacatagtttatgtgaagttgatttctcatgttctttcttttctttctgaattttgaatgctacagtcaaacttcgatgctgccgtagagcctgttgagttctgccgggagagaacaggtggtgttgccaagtatgaaaaggttgtgtacggagaacacttggttcagaaagtcttgacaaacttcgtcatgtaaaatttgtggaaaagaacatgcattgtactccaatgtctgatcgcaacattcgtcactaaaataaaatcatttgtaaatttgtcatagcacagtagaacagtcatattgaagaatggaatgcatccttaattgaaatcacaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0245500, RefSeq:Os09g0245500