Os09g0547500

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0547500| Description = Similar to Lysine decarboxylase-like protein| Version = NM_001070385.1 GI:115480512 GeneID:4347769| Length = 2002 bp...")
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Gene Name

Os09g0547500

Description

Similar to Lysine decarboxylase-like protein

Version

NM_001070385.1 GI:115480512 GeneID:4347769

Length

2002 bp

Definition

Oryza sativa Japonica Group Os09g0547500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22474370..22476371

Sequence Coding Region

22474444..22474591,22474725..22474822,22474943..22474973,22475081..22475395,22475974..22476134

Expression

GEO Profiles:Os09g0547500

Genome Context

<gbrowseImage1> name=NC_008402:22474370..22476371 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22474370..22476371 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcgatcgatggaagaggcggcggcggcagcggacatgaacggcggcgtgcatcagtcccggttccggcgggtttgcgtgttctgcgggagcagctccggcaagcggcgcagctaccgcgacgccgccgtcgagctcggcaaggagctggtggcgaggaaggtggatttggtgtacggaggaggcagcctgggtctcatgggggaggtcgccgaggccgtgcgcaacggcggcggccacgtcattggcgtcatacctaccactctgatgggcaaggaggtaacgggagagacggtgggggaggtgcgggaggtggggagcatgcacgagaggaaggcggagatggcgaggaggtcggacgcgttcgtggcgctgccgggagggtacgggacgctggaggaggtggtggaggtgatcgcgtgggcgcagctgggcatccacgccaagcccgtcggcctcctcaacgtcgacggctactacgacttcctcctcgccttcgtcgacaaggccgtcgccgacggcttcatccccccttcccaccgccacctcttcgtctccgcccccgacgccccctccctcgtccacaagctcgaggagtacgtgccggtgtagcaggagggcgacccggagacgcccaagctgcgttgggagatcgagcagcaggcagccgtccaggtcgtcggctacagctcctcgctccacgcccagctagctattgcagattaatctctcgatctgaattacttagtaattaa</cdnaseq>

Protein Sequence

<aaseq>SIDGRGGGGSGHERRRASVPVPAGLRVLREQLRQAAQLPRRRRR ARQGAGGEEGGFGVRRRQPGSHGGGRRGRAQRRRPRHWRHTYHSDGQGGNGRDGGGGA GGGEHAREEGGDGEEVGRVRGAAGRVRDAGGGGGGDRVGAAGHPRQARRPPQRRRLLR LPPRLRRQGRRRRLHPPFPPPPLRLRPRRPLPRPQARGVRAGVAGGRPGDAQAALGDR AAGSRPGRRLQLLAPRPASYCRLISRSELLSN</aaseq>

Gene Sequence

<dnaseqindica>75..222#356..453#574..604#712..1026#1605..1765#atgtacatctcctctccacacacttcacacttcacctcgatcgatcgatcgcccgcagtagttagcgagagtgatcgatcgatggaagaggcggcggcggcagcggacatgaacggcggcgtgcatcagtcccggttccggcgggtttgcgtgttctgcgggagcagctccggcaagcggcgcagctaccgcgacgccgccgtcgagctcggcaaggagctggtatatatgcgtgattaattaatttctctccatgttgatcatgattaattcatgcattcgatcgagctcgatcaatcagctctagttaactagctaattaattaactgattaagacgatgaattaactggtaggtggcgaggaaggtggatttggtgtacggaggaggcagcctgggtctcatgggggaggtcgccgaggccgtgcgcaacggcggcggccacgtcattgggtccgtacacataggcaccccctctcttcgttctcctcgtgttgcctagctagctcgtactctgtctgttcaatgatcaatccggcaatgtttaatcaatttctttcttgatgcatgcagcgtcatacctaccactctgatgggcaaggaggtaaagaattgatttcaacagctcattaatttcagtcatatatattgactagctaataattaattaaggtaatcaaatggtagaaattaatgatgaggtacgtgtaggtaacgggagagacggtgggggaggtgcgggaggtggggagcatgcacgagaggaaggcggagatggcgaggaggtcggacgcgttcgtggcgctgccgggagggtacgggacgctggaggaggtggtggaggtgatcgcgtgggcgcagctgggcatccacgccaagcccgtcggcctcctcaacgtcgacggctactacgacttcctcctcgccttcgtcgacaaggccgtcgccgacggcttcatccccccttcccaccgccacctcttcgtctccgcccccgacgccccctccctcgtccacaagctcgaggtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacaggcttagcaatcttaaaattgtgatttttgtcgcggggataaaaaaacccgaaatatctggaatttcgatatttttttggctgacccttttttaagaattttgatgaattttgaatgaatttgaataaactttaatcaaattaaaaaaactgaaatttctgacgtgatatgtgcttgccggtaggggggcgaagttaccaaaaaattcaattaccatacacatctccatccatcaatcatcatcatcttcttcttctgcatcgatcgtatagtcgtaggccagtcgagagtattctcagtacagtcgtattattttgatgtaattggctatttgtggactctcgtatgctttctcgatagatatatctgtccttcgattccctggacaacacggcggcgatcggtccactgacctgatccgctagctatagctagttactgtttccaagctgagctgattcaaacatgaccagtgttttgacttgttttgtgcttgcaggagtacgtgccggtgtagcaggagggcgacccggagacgcccaagctgcgttgggagatcgagcagcaggcagccgtccaggtcgtcggctacagctcctcgctccacgcccagctagctattgcagattaatctctcgatctgaattacttagtaattaatctggttgactaagtagatcatcaacgagaggatgcagaggaggaacaggtacctagtacgtacttacgaattctaaaaaaaaaggtactctgtactcctcaattatctgcctttagctagtgtattatgtacgtgctctggttattgcttattgttagctggtctggctgcatgtactctatatatatatgatgcagttctgtacatatacatcgatcgatcgagcgtgtcgcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0547500, RefSeq:Os09g0547500