Os05g0449100

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0449100| Description = Conserved hypothetical protein| Version = NM_001062233.1 GI:115464196 GeneID:4338953| Length = 8724 bp| Definition ...")
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Gene Name

Os05g0449100

Description

Conserved hypothetical protein

Version

NM_001062233.1 GI:115464196 GeneID:4338953

Length

8724 bp

Definition

Oryza sativa Japonica Group Os05g0449100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22084677..22093400

Sequence Coding Region

22085338..22085622

Expression

GEO Profiles:Os05g0449100

Genome Context

<gbrowseImage1> name=NC_008398:22084677..22093400 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22084677..22093400 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttggattcaaaccagatgcacatccaagtagtctccgattgtccatgttagctcacacagaaggtcagagcttactgttcttgcgcagttgccagaagaagatcacaataggggatcttgtcattagacacagcaggagtaaagagatgtcagctgagcttttgcgagcacgtattctggggttagattttactgtatgttggagagctatggtacgcaagccggccgccggccggcggcggttcggtaggcatgctgaaattgacgcccgtgatcggtga</cdnaseq>

Protein Sequence

<aaseq>MFGFKPDAHPSSLRLSMLAHTEGQSLLFLRSCQKKITIGDLVIR HSRSKEMSAELLRARILGLDFTVCWRAMVRKPAAGRRRFGRHAEIDARDR</aaseq>

Gene Sequence

<dnaseqindica>7779..8063#acatcgacaagtgggaccgtgggacccacctgtcaggtccatccccaacctccatccaagccagccggcaactgccgaagccgccatggacggccgttgccgcccacgtcgccgccgattccgggtcctcccgctcacgccctcgcgcccaaaccgcataaaatcgattcccctccacctcctctactgctctacactctccctacgtttcccccaaaaatcgtgccgggatagagctccacttcgcccacgatttcacccacgtcgccggccgttgccgcccaaatccgccacgcccggcaacggttttccctccccaagcatgtaaaatccatccccgggctcccttctctcgtttcccccccttgccggcgcttccctcgccttctcccgctctccccacgccgctccccatcgctgccgcttgccagcgaccttcagtcggccgctgccgccgcgctagtcgtcgccgcacctcgccgccggcaccggcggcttcactgcatcaagccccaccctggccgctgctctgctcctccaaaccaccacccaaacgccccctccccgtgcatccgagccgccaccacctctgccacgctccagccgcccgccacagccgctgtaaccaccaccgccacctgcagcttcgccgcaccgcgtagcaccccgtcctccactccttttacccctcgtcgccaccgaaacgccgccccactacaaaaccgagccaccgtcgcctccctcggctccgcaaggacgaggagaacctgggccatcccttcccatcgccagaaactcactggacgtccgttttcccgtgcgccggtgagcccttcctctcttgttttcctctccggccggccatgtcgccgccccatcctctctaacacctctcctcccatcccattgtgcagccgctgctcgtccactccgtcccgagcgccgcccgtcgccggagtgccgccgtctccctccgccctgagcttcgccggccgcctccctccatcgccataccccacggtgagcactccccacccattttcctctttctccccttcgtcggccatctcccgtgctcgccggcgcaccgcgtcgcgccgccatcgccggcggccgtccgcgtgtgtgccgccgccttgtcggggtgtctggcgagcctgccccttgccgctctgtgtcgccgcccgtggtcctggtccacggtgacgccctggccgcggggaccgtgtccaccatgcgcaatccccctttgccgctgacgtgtgggacccgcctatcggtgccggcttcccttgctgacgtcagcggcggtccttttcttttgtaaaaataattaataattgcgcaataaatcattgataattatagaaattcatttaatggctcaacaacttctaaaattcatatctaattcatatgaacaccaaattgagccattcaacttacaaaattcatctaaaattgagctctacatgtttgtttactttttatgtactatttgcttggtgtttattagaagttttcctcattttgcgtgccagcgagtagattccgtcgtttcggaagtccacagtcttaaggataagagttcggaagattgttcgaagaagcaaggcaagtcacacattctccttgagtatattgagcctatttttttaatgttttaccgtttgcaaataaatatgcatgttttgctaattacatgggatcagggtttacctacctgctcgcttgtgccgtgtttacttgatgtatgtcctttgtcgaccttgggtgataaatcggctagctgttgttacttatgttgacatagctagaactatatgcttagccatgcttaattaccactagctcacttgatgggataattacaattttagacatctagtatcttgacgagttgtgtgctcgagacatctggccatggttcatggtcgtaattatccaactaaaatgcgactgaatggtgggctgtgggtgcatggttttgctagtcgcacccatgccaattaaggaccggttcacgggaaaccctaaaagacttacagtgcttaccacaagcgggagtgggtaactacttgatctgaagtatagctcgaccatttcctaggcaccggtggtgagggtgggcgtgatgaagttgggtcgaccggggtgtccggttgtccagctgccggattcaccacggtgcacgaggggactgcccacctccggggtagggggtgggggtgaaaccttagcgtggtgtggatggttaggggagggttatatgaagggtcttgtcacaatcactcgacatggtgacgtgtcaggcctgccgcgatgacatgctgatggattgtgtcttgtgggtacagttgtgcacctctggccagagtaaaactattcgaatagccgtgcccgcagttatgggcgatcgaccagattcaccgtgattagtcccacacttaataaattgacccaatgcacagtagttcaggtgggttggttcggcctgttcaatgtggtatagcattgttcagtggagatttaatattaccttaattactcaatcgttttactgttttgctcaataaaatgttttacaactgcctttatgcaaatagccacaagcctctccttgtatccccttgcacgtttgtatcgtaggtgtggcttgctgagtacggtggttgtactcagccttgttattatttcccccttttcagaagtgtagtgcttctgagctgaagacgaagttagaggaccaaggctcaaaccccagttgagttttgcctgtggagtggagctgaagccccgctaggataacctttttccgctgttgtcgttctcttttggtgtgaggacaaagtgcctcttctataagtattttacgctttatttacgtttggaactgtttattacttgtcgttttatgtaccctagctggtcctggacagagattttaatacacaaaatagtctgaaaatttgggctgaatttctgggcatgacacatcgcctgcatgccactccagccattgcctgcacgccgcagtcgccgttccagccctcggccgccgccaccaccgatgcgtccaaagggagaagagaaaagagagagaagggggagagagagaggaaggaggaagggaaggagaaaggatgacatgtgggccccacatgtcggtgggtcgcaatttttttgtttgattgacagatgggtcccacagatatgttttttaattctaatgccacgtaagcgccacgtggaatgaaaatcgggttagcaccgccacgtcagcaaaaccaccctacaaaaccgctagaggagttaaattgcactggtttcaataatttggggagtcatcctacccggtatggcagttaagggtcacgaattagattcggtgaataatttagggagtctaagtggactttttccttttagatgacggcccatattttattttagaagatgggccatgttggttaaatactgggaataagtccactttgattcccttgtctagtggttgatctaattcatatccctgaaccacgatatgagatatctcgatctcctaactattaaaattgttgccatttgatttctttaatagatttggaggatggttttgttgacatgaccattacatggtagtgttgacctggttttcgccctatgttgttttgatgtggtgcttatgtggcattaggattaaaaactatatgtgggacccatttgtcattcacataaaaaaaatatggacccaccgacattgggggtgcccacatgccatcctctctctccttcctttcttcctcctccatctctctcccttctctctctttctctttctctcccttttctcttcgtctgctaggggcgggcgctcgagggccggaacagtggcggtcgagagtgcgggagctagagcggcggcggcggtcataagggcggagccagagtggcggcggcgggcgggaggacgggcactagagtggcgatggcggtgggtgggcgagggcccgagcggtggcaaaggcaacgggcgggcggctaggcggagggtgctcacgatctaggtgccaccgcctctcccctcaccgtttgcccccctccccctatccctagcaatagcttcgaacggcggaggagaaggcgtcaacggatcctaggatggtggaggaggaggaggcagtggtggtagaggagctagcttgatgacgtggagggtgctcgcgagctcagcgacattgcatccggtgctcctctgtggctccctctcgtgaggctggcctcctccctcttcgctatggcggccaccatcctactgctctatctccgctctgcatccgctcgcatgccaacatcgtccaccgcctttgttcccacgcccagcttcggtatcatcaccgccgctccaatgctcgcccacctgcccactgccaccactctgcccccactccgctggttgttgctccaacccccgttgctcacatacggccgaaggggaagagaaaggggagagaaagaaagagggaagggagagagggtggaggaagaagggaagaagaaagagaggatgatatatgggtcccacgtgtccgtgggtcacacaatattcttttttaatgacaaatgggtctcacattttttttatttctaataccacataagtgccgcgtcaatgctacgttagacgaagactaggccaacaccgccatgtaggggccacgttagcaaaaccgcccttcaaaaccgtcgagagggagttaaattgcatcgattttaataattgtgggtttagatatccggtatcgtggtttaagaatacgaattaattcagcaactagttaagggagtcaaagtgaacttattccttaatactgtactgtacatgtgctcatgcgaagcccatctcggtgtgcccaagttaccgtcagcctttttcctacaagaagttagcccaagttccatcccgaaacagtgctgtgtatataccgccggttcattggtcgcgacacgagagaacgcaatcgctaccgcgaccacgtccacgaccatgatctttcctgcccaccctgcacctttaccatctcggcgttttgccggtgttgctctcggccgacgccctctcggtctcgggggcccgcctcaccgtacggtcgccaatcgccacgcccacgccctcacccgacgggccacgactccacgagggaacacggcccacgagccaccgaggcgaacgtgcgcgcacgcgcaggcgcggcaggttcgcgttgggtgtgtttcccgttgaaataatgcttcggtcctccactcctccggcacggccaactcgtgacagcaacgccggcccagccgaccgggaggatgcgaatgcttggcgcgtcgcggcggtgcggcgggccacggggacaagccacacgagggccggtcgaaatcgcggcgccatttcagcatgatgaacaggagctcgacaattgctggcgccgatccggatgatcctactgcatgccgtctcactcccatccatccatatccattctctactagcgcagattgtggctgacgaatccactccctttggtacctcgccatggcccgctagctatataatctgcccaaactaagtaattcccaacacaatcttctacgacgccggctcgcccctcgcccctcgcttgaacgcttagagatacagtttttgccgcgctagttgatccctcctgcattcgcaccatggtggaggctgcctcggctgcgccggcgacggtggtcgttccgctgacgcagacgctctgcgcgaatgcgcctgcgacgagcgtcaccgtcgtttcgaagcagaccgttcggcccgacggcgcgtcggcggttggagacgtcaagctctcggtctccgacatgccgatgctgtcgtgccactacatccagaaggggctcttcttcccgccccctggcgtgccgatcgcctccctcgtgtcgtcgctcgtgtgcgcgctctcccgggcgctcgcggtgttccctgccctcgccggccggctcgtcacgctggatgatggccgcatcgtcatccggtgcgacggcgtggccgttgagttctaccacgcggtcgcgcccgctctgtcgctgggagacttcctcgtgcccaacgccgacgtgccgaccaggctgacgaaggatttgttccccatggaccgcaccgtgagctacgacggccaccgccgtccgctcacctcgttccagctcaccgtgctcggcgatggagctgtcttcgtcggcttcgtcgctaaccacgccgtcgtggacggcacctccttctggcacttctttaacacgtgggcaggtctctgccgcggcacgccggtccagccgccggacttgcgccggaacttctttggcgactccacggccgtcatccgcttccccggtggcgcgggtcctgccgtcaccttcgacgccgacgcgcccctccgcgagcgagtcctccatttcagcgccgccgccattcgcgagctgaaggccaaggccaaccagtggaaaagatccgacaaatttgccgaggctaacgggaagcatgtggatgaaacgaaggctcatggcggttacagagagatctcgtcgttccaatcgctgtgcgcgcatatctggagggcggtgacgcgatcccggcggctgctggcggccgacgcgaccacgacgttccgcatggcggtgaactgccggcaccgcctgcgcccggcgatctccccgctctacttcggcaacgccatccagagcgtagccacaaccgcgacggtggccgagctggcgtccaacgacctgcggtgggcggcggccaggctgaacgcgaccgtggtggcgcacgaggacggcgccatccgccgggccgcggcggagtgggaggccgcgccgcggtgcttcccgctgggcaaccccgacggcgcggcgctcacgatggggagctcgccccggttccctatgtacgacggcaacgacttcgggtggggcagggcgatcgccgtgcggagcgggcgcgccaacaagttcgacggcaagatgtcggcgttcccgagccaggctggggacggcagcgtcgacgtcgagttttgcctcgcgcccgacaccatggcccgcctgctcggtgaccacgagttcttgcagtacgtgtcgcgtgcaccgtgacgcacgtattctggtgtggtgcagtgagcgaggggacgatcacgagatgcgagttccccacatgacatgattatctctctggtggtgatgcagattgcagtagccgctggacacatacgttgctgtgctggattggtgtatgcttgcaaaaatatctaagctatatatccgagtatccgttactcttctggtattccatccattaagcggttggccaagtttgaacagccgcacagagagttgcttttaggatcaagtggagtcgtgctctgttccttcctccctgttagaagtacttgtcttgtgagttcgatggataattatttgagtacaaatttcacacactatatatgcttcaattaacctattacaaagatttagcatcaatttttttacgaaactatttaagacattgtatagcaaagctacaactctagaagtcactttaattcataccattggcaaatgactttcataaaatttaaattcgagtaaattgcactttgcaccgggtagattgatattgttttcactttgcaccaggttttgcatatactttcacttcgcgccggggatgacgaattaactttcacatcacaccatctttcatgtttggattcaaaccagatgcacatccaagtagtctccgattgtccatgttagctcacacagaaggtcagagcttactgttcttgcgcagttgccagaagaagatcacaataggggatcttgtcattagacacagcaggagtaaagagatgtcagctgagcttttgcgagcacgtattctggggttagattttactgtatgttggagagctatggtacgcaagccggccgccggccggcggcggttcggtaggcatgctgaaattgacgcccgtgatcggtgagtacccacgaaatcgcggaattgctctgcgtgtacgtgagcacctcgcaatatccatggtccccgctgcccgtggactcagctggtgcatgtgtgcatctcacgccatcccgtgtgattcagtcgatcggccagcgtgggtcaagggcgcgagccaacatggacaacagatgacagtttggatgacgccttgtgcatcggctttgagtccaaacatggaaggtggtgtgatgtgaaagtaaatttgtcatccccggtgcaaagtgaaagtatatgccaaaaccggtgcttgtcttttattccggcatgtttgtggctatgtgaggaaatggatgttgataagttgggttgttagctttaggttgatttggttcttagccaggtatttttgcaggtgtcgtttatcaatcgttaatttttgggagccttttcaacctagcctccaaagacttctaacccgctatctagttgaagcaaacctctggactgagagctttcaacgctctgatcgaattgttgtttcaacttgatcagaaatcttttcccgcctttttcattcacatcctatgtaaaggctctaatgctgtcgggccaaacctttatactccctataatatgacttattttcaatggaaaattcaggtggaaaagttctcctctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0449100, RefSeq:Os05g0449100