Os05g0449600

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0449600| Description = Similar to Exoglucanase precursor| Version = NM_001062236.1 GI:115464202 GeneID:4338956| Length = 3228 bp| Definiti...")
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Gene Name

Os05g0449600

Description

Similar to Exoglucanase precursor

Version

NM_001062236.1 GI:115464202 GeneID:4338956

Length

3228 bp

Definition

Oryza sativa Japonica Group Os05g0449600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22114300..22117527

Sequence Coding Region

22114313..22114719,22114817..22114907,22115004..22115152,22115235..22115478,22115620..22115724
,22115815..22115820

Expression

GEO Profiles:Os05g0449600

Genome Context

<gbrowseImage1> name=NC_008398:22114300..22117527 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22114300..22117527 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agagccgagcaacgcccacaatctcgcgaatccgcttcacccggcatggcagcggcggcgctgtacaaggacgcggcggcgccggtggaggcgcgggtgcgcgacctgctgggccgcatgacgctgcgggagaaggcggcgcagatggcccagatcgagcgcaccgtcgcgtcgccccgcgccatcgccgagctcggcgccggcagcgtcctcaacggcggcgggagcgccccgctcccccgcgcctccgccgccgactgggcccgcatggtcgacggcatgcagcgccacgccctctcctcccgcctcgccgtccccatcctctacggcaccgacgccgtccacggccacaacaacgtctacggcgccaccgtcttcccccacaacgtcggcctcggcgccaccagggacgcggagctcgcgcgtaagatcggcgaggcgacggcgctcgaggtccgagctaccggcatccactggaccttcgcgccctgcgtcgccgtttgtagggatccgaggtgggggaggtgctacgagtgctacagcgaggacacagaggtcgtgcgctcgttgaccaccatcgtctccggcctgcaggggcagccaccggctgaccaccctcatggttacccgttcctctcatcccctagggtgaatgtgcttgcttgcgccaagcatttcgttggggatggtggcacggacaaggggatcaatgagggaaacaccatttgctcacttgaagatttggaagggatccatatcagaccttatcctgattgtatatctcaaggggtggcaactgtcatggcgtcctacacccaatggaacggggaaccattgcacgcaagccgctatttgctgacagatgttttaaagggcaagttaggcttcaagggttttgtggtgtcagattgggagggtattgacaggctctgtgagcccagaggttctgattatcgctattgcatcgcgcagtctgttaatgcaggaatggatatgatttga</cdnaseq>

Protein Sequence

<aaseq>RAEQRPQSRESASPGMAAAALYKDAAAPVEARVRDLLGRMTLRE KAAQMAQIERTVASPRAIAELGAGSVLNGGGSAPLPRASAADWARMVDGMQRHALSSR LAVPILYGTDAVHGHNNVYGATVFPHNVGLGATRDAELARKIGEATALEVRATGIHWT FAPCVAVCRDPRWGRCYECYSEDTEVVRSLTTIVSGLQGQPPADHPHGYPFLSSPRVN VLACAKHFVGDGGTDKGINEGNTICSLEDLEGIHIRPYPDCISQGVATVMASYTQWNG EPLHASRYLLTDVLKGKLGFKGFVVSDWEGIDRLCEPRGSDYRYCIAQSVNAGMDMI</aaseq>

Gene Sequence

<dnaseqindica>14..420#518..608#705..853#936..1179#1321..1425#1516..1521#agacgatcagtagagagccgagcaacgcccacaatctcgcgaatccgcttcacccggcatggcagcggcggcgctgtacaaggacgcggcggcgccggtggaggcgcgggtgcgcgacctgctgggccgcatgacgctgcgggagaaggcggcgcagatggcccagatcgagcgcaccgtcgcgtcgccccgcgccatcgccgagctcggcgccggcagcgtcctcaacggcggcgggagcgccccgctcccccgcgcctccgccgccgactgggcccgcatggtcgacggcatgcagcgccacgccctctcctcccgcctcgccgtccccatcctctacggcaccgacgccgtccacggccacaacaacgtctacggcgccaccgtcttcccccacaacgtcggcctcggcgccaccaggttaatccgcctcctccatgttccccccactttttggtgttcggtttggtttgacaatccaaccaatccgtatgcctttgaggctttgacctcccagggacgcggagctcgcgcgtaagatcggcgaggcgacggcgctcgaggtccgagctaccggcatccactggaccttcgcgccctgcgtcgccgtgagtagaactccaaaactatccggattaaccgatgttgtttgtttgggatccatccttgatgcgtgtgtgttctggtggcgcaatgcgtgataggtttgtagggatccgaggtgggggaggtgctacgagtgctacagcgaggacacagaggtcgtgcgctcgttgaccaccatcgtctccggcctgcaggggcagccaccggctgaccaccctcatggttacccgttcctctcatcccctaggtagttataaacagtgggattcactgcggttttggtataacccacaacctgtttgtgtaaatgggcctatgtggttttgcagggtgaatgtgcttgcttgcgccaagcatttcgttggggatggtggcacggacaaggggatcaatgagggaaacaccatttgctcacttgaagatttggaagggatccatatcagaccttatcctgattgtatatctcaaggggtggcaactgtcatggcgtcctacacccaatggaacggggaaccattgcacgcaagccgctatttgctgacagatgttttaaagggcaagttaggcttcaaggtagtagagactatggaaattgtttacttgcactatcacccaaaaaaaaacaaaagaaaaagattatgaaagttggttggcattttatcatgtactcttaggttgtggctgtgaattaacatgtataagctcttgtttcagggttttgtggtgtcagattgggagggtattgacaggctctgtgagcccagaggttctgattatcgctattgcatcgcgcagtctgttaatgcaggaatggatatggtatttatttagttattaagtggtcatatgaaacacattctccagtttgtttcatttgttgaataatctgcagattatgatacctttcagatttgagaagtttttggaagatcttgtgttcttggtagaggcaggggagataccaatgtcacggattgatgatgctgttgagcggattctgagggttaagttcatatccggagtgttcgagcatccattttcagatccgtctctagcagatataattggttgtaaggtggcatgcatgttttgatgttctatttgttcttctgtttgaattgtctcacactggatagctccaacatatatatgcatgttgatcttttaggagcatcggttgctggcacgtgaggctgttcggaagtctttagtacttctaaaaaatggcaagaatcagaaggaaccattccttccattggccaaaaatgtgaaaagaatacttgtagctggaacacattctgacaatattggatatcagtgtggtgggtggacaatagcttggaatggagacagtggaagaattactattggtaagcactaagcgaaaacccagctataacatatactccgtattttgtatgtgtgaaatatttatgttgcccacttcaatactccgtgctgtttttgtaccattggccaatgtcgcattcgataatatatggtctggtgctattttctagggtagtgcttggcacttcgatagtacaataattttcatactttcatattttggtagctttactgccctatctgcaagcagaaataaaaattgtgaggttaagccgttgagttggagttaccactttctaattcttctcttttgattttagaatgacattggtactgagttaactgtttctcttttgatttttttcccctgaaagaaactagttttctaattagttactgataatttacactttacagtccactttaactggtgggatgcatacagctgggaagtatgaccagcggatttttcttttcctttttaagatgcatcaccatctatccttggaattagaaaacaataaaacctagtttctttatatgacgcactcaatattatttttaaaagcatctatattttgtatctaaaacaacaggtacaaccatattggaagctataaaagaatccgtgggagcagaaactgaagttgtgtatgaggaatgcccaacagaagccacagttgaaactggggaattttcctatgcagttgttgtggttggtgaggttccatacgctgaatggttgggagatagaacggatcttagtattccatttaacggctccgaccttatttctcgtattgctagtaaagtccctaccctagttgtggttatatctggaagaccattggttgttgaaccccaagttctggacaaggtagatgctcttgttgctgcctggctacctggaagtgagggtatgggagttactgattgcctctttggggatcatgattttttgggtacattgcccgtgacatggtttaggtctactgatcaattgcctataaatgctagagatgctagtgatgacccattattcccttttgggtatgggttgaaaatgttccgaggtgattaagtttttagcattaatcattgttggttcggttatacatttgaatgcttatatgaatcttacacacgctgtaccagttggctttttgaataatgtaaaagagaaataatgtcatgtttcagtattgcaggtgtgctgtaaggtgtaaagcttgattcttatatttttcatagaggttttagttactccttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0449600, RefSeq:Os05g0449600