Os05g0449900

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Revision as of 10:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0449900| Description = Homeodomain-like containing protein| Version = NM_001062237.1 GI:115464204 GeneID:4338957| Length = 2091 bp| Defini...")
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Gene Name

Os05g0449900

Description

Homeodomain-like containing protein

Version

NM_001062237.1 GI:115464204 GeneID:4338957

Length

2091 bp

Definition

Oryza sativa Japonica Group Os05g0449900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22127187..22129277

Sequence Coding Region

22127831..22128302,22128408..22128883

Expression

GEO Profiles:Os05g0449900

Genome Context

<gbrowseImage1> name=NC_008398:22127187..22129277 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22127187..22129277 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaaggagtcgtacatggaggtgctcccgccggcgccggcgcactacttcgtcggccaggctgcggcggcgggcgggtggttcttgccggaccggcgcggcggcggcggagcgtggtcgcaggaggagaacaaggtgttcgagcaggcgctggcggcgctcgaccggaacgacccggagaggtgggagcgggtggcgctgctgctgcccggcaagacggtggccgacgtcatgacgcactacgacgacctcgagaacgacgtctgcttcatcgaggccggcctcgtccccttcccccactacggcgccgccggcggcggcggcggctccgggttcactcttgactgggacggcggcgatgaccccgccggccttgggttcaagcgctcctgctacatggtcggcggcaagcgcgcgcgcggccctgaccaggagcgcaagaagggcgtgccgtggacagaggaggagcacaagttgttcttgatggggctgaagaagtacggcagaggtgactggaggaacatctcccgcaacttcgtgacgagccggacgccgacgcaggtggccagccacgcgcagaagtacttcatccggctcaactccggcggcaaggacaagcgccgctccagcatccacgacatcaccaccgtcaacctccccgacgacgaccacggcaacccctcgccgtcgccgccgccgtccgtgctcaccgcgcactcctcctcctccgccgccgccgtctcggagcagttcggcgtgctcgtcgacggcaagcctccgccgccgccgctcggccgtggcgccgggcaccaccacttcatgccccatccctacgcccaggtgaagatcgaggccggcaattcgcacgtcgccggcggcggccgcctcgacgactccgttctggtgcagatgcaatgcggccagctgatgcagcctctcggttga</cdnaseq>

Protein Sequence

<aaseq>MMKESYMEVLPPAPAHYFVGQAAAAGGWFLPDRRGGGGAWSQEE NKVFEQALAALDRNDPERWERVALLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHY GAAGGGGGSGFTLDWDGGDDPAGLGFKRSCYMVGGKRARGPDQERKKGVPWTEEEHKL FLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTV NLPDDDHGNPSPSPPPSVLTAHSSSSAAAVSEQFGVLVDGKPPPPPLGRGAGHHHFMP HPYAQVKIEAGNSHVAGGGRLDDSVLVQMQCGQLMQPLG</aaseq>

Gene Sequence

<dnaseqindica>976..1447#395..870#acgcgcacacgggcgaaaccccaaccaagctcctcctcagctcagcttctcctgtgctctgccctcctcttctcgcaggagtgagagaagccgaggaggaggaggaggaggcttttgtttggttgagacgccacaaactccaccaagggccaatcaacgaacgcctcgatttcttttaagcggcgtctcaaggtggaggccgaatcatctgtggccactttggcatctgccggaatcgatgctgtagcatccataaataccgcccttctctgccgccccccatctcccctccccctcttcttccacctcccaagagctcgcttttgagaaagaaaggtgaaaaatcttggtcggttggcccggccagccagccagccgcctcgcggtcgcggagatgatgaaggagtcgtacatggaggtgctcccgccggcgccggcgcactacttcgtcggccaggctgcggcggcgggcgggtggttcttgccggaccggcgcggcggcggcggagcgtggtcgcaggaggagaacaaggtgttcgagcaggcgctggcggcgctcgaccggaacgacccggagaggtgggagcgggtggcgctgctgctgcccggcaagacggtggccgacgtcatgacgcactacgacgacctcgagaacgacgtctgcttcatcgaggccggcctcgtccccttcccccactacggcgccgccggcggcggcggcggctccgggttcactcttgactgggacggcggcgatgaccccgccggccttgggttcaagcgctcctgctacatggtcggcggcaagcgcgcgcgcggccctgaccaggagcgcaagaagggcgtgccgtggacagaggaggagcacaagtaagccaccccccaactctcagaatctttgatggaattggaccaagctgatgaagccatggcgtgttcttggagctgaatttggtgaggctttctttgttccaggttgttcttgatggggctgaagaagtacggcagaggtgactggaggaacatctcccgcaacttcgtgacgagccggacgccgacgcaggtggccagccacgcgcagaagtacttcatccggctcaactccggcggcaaggacaagcgccgctccagcatccacgacatcaccaccgtcaacctccccgacgacgaccacggcaacccctcgccgtcgccgccgccgtccgtgctcaccgcgcactcctcctcctccgccgccgccgtctcggagcagttcggcgtgctcgtcgacggcaagcctccgccgccgccgctcggccgtggcgccgggcaccaccacttcatgccccatccctacgcccaggtgaagatcgaggccggcaattcgcacgtcgccggcggcggccgcctcgacgactccgttctggtgcagatgcaatgcggccagctgatgcagcctctcggttgacaaccctgttcctggagcagcaacccacgaccaaccatgaaaatgctctcgtctcttggtgtgctcgaggagggagatgcaactcgtgctcttgcttccaaccatcaatggagttctgaaaacgaaatgatcgcaacagcacgaaggacaagtagtaacagcacagtagccaggcattgcgctgctgctaaattaagctccctactaccgtgtatcccggatgatgagaggaagaagaagaagaagaagaagaatcacgagatagaagaaaaagaagaagaagaagaagaagcatattggacatggcatctctgcatttcgcatctgtgtacataagaccaagaccaaggttaaataattagttcacaattgatatttgatactccattgattatctcctgtgctatgggaggaggcacaggatgggtactactaccagctagacaccgtttttgttgatgtactattagtcaagttattattgtcatgcaagtattatttggagatatagcacgtagcagcagcatattgtctctgtttttttttttgtcaaggctctctagtgttcagttgagggtattagcattggtcaccctctcattgacccttgctttattaatgataattatggtttttatctgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0449900, RefSeq:Os05g0449900