Os09g0547800

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Revision as of 07:34, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0547800| Description = Cyclin-like F-box domain containing protein| Version = NM_001070386.1 GI:115480514 GeneID:4347770| Length = 2286 bp|...")
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Gene Name

Os09g0547800

Description

Cyclin-like F-box domain containing protein

Version

NM_001070386.1 GI:115480514 GeneID:4347770

Length

2286 bp

Definition

Oryza sativa Japonica Group Os09g0547800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:22484690..22486975

Sequence Coding Region

22484901..22485728,22485856..22486011,22486460..22486684

Expression

GEO Profiles:Os09g0547800

Genome Context

<gbrowseImage1> name=NC_008402:22484690..22486975 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:22484690..22486975 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgaccacgagcgacatggcgtcggccgccggcggtgccagcggcaaggactggtttgactgcctccccgatgatctagtgcaccacgtcctgtccttcttgccagcgctggacgccgtccgcaccagcgttctgtcgcggaggtggcgcgacttctgggtctccatgcctcgcctcaacgtcgacgtaggtgacttccgcgacgacggtcagttcgagaatttcacggtccacgcgttgcctctcttggacagcagcgtgcccttgcgctctctccgtctccgttcttccctacactacctttctgccttgtgggtcaaccatgctgtcaagcgcaaggttgctgtgcttgagtactctgggcgtgcggaactgtgtagctctgttgatgccagcctcagcttggcttcttcatatctgactaaggtggtgctcaaacattttgattttgattatggccagttttggccattgatcgatgcatgccctgccctggaaaatctggagcttttggatgtttggaccttctactcagtaacgatctcgtcaagttcactcaagcatctgcggatcgtcagctgtttattttacaatggattccggatcaatgctccaaatcttctcacaatgtgccttgacgatgtaaatgtcaatggtcctttgggacatgattctttggtcttggagaacttgtcatccttaatgactgcttcagtcagtgtataccattgtttctatcctaaacattatgtcaaaactgagctgcatttttttcatggcctttcacatgctagaaacctaaaattgatagctccactatatgaggctctgtttgaggagggcttaccaacatgcccggtctttaacaacttaaaatgcttggtacttggtgactggtgcatggcttttgacctttatccactacgttgtatccttaggcagtcaccaatgttagaggagctctgtgtggaacttggggaggaggagtgtgagaattgcaagaacagaaaaccagctttctcatatggggaaatatcaccattttggtgtgatcgcctgaagaccatcaaaatcaaatgtaccgaacatgatgagagatttgtcgctttgctgcaactgttttgcaagatcttagtctgtattgaggaagttgacatagataggcagtgggttagtgctcagcctcccgattcgtctgagctttga</cdnaseq>

Protein Sequence

<aaseq>MLTTSDMASAAGGASGKDWFDCLPDDLVHHVLSFLPALDAVRTS VLSRRWRDFWVSMPRLNVDVGDFRDDGQFENFTVHALPLLDSSVPLRSLRLRSSLHYL SALWVNHAVKRKVAVLEYSGRAELCSSVDASLSLASSYLTKVVLKHFDFDYGQFWPLI DACPALENLELLDVWTFYSVTISSSSLKHLRIVSCLFYNGFRINAPNLLTMCLDDVNV NGPLGHDSLVLENLSSLMTASVSVYHCFYPKHYVKTELHFFHGLSHARNLKLIAPLYE ALFEEGLPTCPVFNNLKCLVLGDWCMAFDLYPLRCILRQSPMLEELCVELGEEECENC KNRKPAFSYGEISPFWCDRLKTIKIKCTEHDERFVALLQLFCKILVCIEEVDIDRQWV SAQPPDSSEL</aaseq>

Gene Sequence

<dnaseqindica>212..1039#1167..1322#1771..1995#gccgccgccacccgccgcgaacgacgcgccttcccgacgccgatcgagcgcactcctccctgctatatttgggtacacggtgtagtccgatctgtttcatcgattaaccttgctcgattgattgatcccgtcccctcctttgatctgagattcagaattacttcttgtgttattgtcatctacaaaaggtgcaggcaacgtgctcgacggaatgctgaccacgagcgacatggcgtcggccgccggcggtgccagcggcaaggactggtttgactgcctccccgatgatctagtgcaccacgtcctgtccttcttgccagcgctggacgccgtccgcaccagcgttctgtcgcggaggtggcgcgacttctgggtctccatgcctcgcctcaacgtcgacgtaggtgacttccgcgacgacggtcagttcgagaatttcacggtccacgcgttgcctctcttggacagcagcgtgcccttgcgctctctccgtctccgttcttccctacactacctttctgccttgtgggtcaaccatgctgtcaagcgcaaggttgctgtgcttgagtactctgggcgtgcggaactgtgtagctctgttgatgccagcctcagcttggcttcttcatatctgactaaggtggtgctcaaacattttgattttgattatggccagttttggccattgatcgatgcatgccctgccctggaaaatctggagcttttggatgtttggaccttctactcagtaacgatctcgtcaagttcactcaagcatctgcggatcgtcagctgtttattttacaatggattccggatcaatgctccaaatcttctcacaatgtgccttgacgatgtaaatgtcaatggtcctttgggacatgattctttggtcttggagaacttgtcatccttaatgactgcttcagtcagtgtataccattgtttctatcctaaacattatgtcaaaactgagctgcatttttttcatggcctttcacatgctagaaacctaaaattgatagctccactatatgaggtttgtacaaactccttaactatttcaggttaagtttgtttctagactaccattgttttttttttttaccattttgatataacatctaacctataatttgttttgttctttttgtttgggtgcacaggctctgtttgaggagggcttaccaacatgcccggtctttaacaacttaaaatgcttggtacttggtgactggtgcatggcttttgacctttatccactacgttgtatccttaggcagtcaccaatgttagaggagctctgtgtggaacttggggaggtacataattgtttctgcatcttactccagaaccgtgcaagggcaacaaaccaatgcttgtttgtgatatatggttggttgctgagcttacggctattgtttctattctagtttggcgattggtttttttttaatgaaaatcattaaataaagcaggagaaaaatacaacccctaaggctatgtttggataatgggaaatgaagagtggattggtattgggaaatgaatcaagggctaggatgaaataagttagagaaaatggatggttaggattcaaagttaccccttcataggtggaaaattatttccctttccattatccaaacggtgcctaagagcgaaaataaaaggggagaactgtacactttaaacaagatgtggtataagctcatgttggcgcttagcccctgccatggacctaatggaacttttttttccttattgcaggaggagtgtgagaattgcaagaacagaaaaccagctttctcatatggggaaatatcaccattttggtgtgatcgcctgaagaccatcaaaatcaaatgtaccgaacatgatgagagatttgtcgctttgctgcaactgttttgcaagatcttagtctgtattgaggaagttgacatagataggcagtgggttagtgctcagcctcccgattcgtctgagctttgaaggccacagaaaaacctggcaaatgtctaatgatttgtatccttatcatctactcccccgtccaaaaaaactaaatctcgtactagatattggtacgttgtccagattcataatattataatatgtcaacgtctaatatgaggtttagtttttttagacggagggagtagtacacaaccttgatagcactggcaggagttcgtgctaccttgcgggcttgtgatatctattttgttgccatggagatgcctggcgccatgataattaagactttcgtttgatttatgaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0547800, RefSeq:Os09g0547800