Os05g0453300

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Revision as of 10:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os05g0453300| Description = Conserved hypothetical protein| Version = NM_001062249.1 GI:115464228 GeneID:4338970| Length = 2638 bp| Definition ...")
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Gene Name

Os05g0453300

Description

Conserved hypothetical protein

Version

NM_001062249.1 GI:115464228 GeneID:4338970

Length

2638 bp

Definition

Oryza sativa Japonica Group Os05g0453300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:22284805..22287442

Sequence Coding Region

22285669..22285775,22285860..22285967,22286069..22286393,22286476..22286841,22286915..22287115

Expression

GEO Profiles:Os05g0453300

Genome Context

<gbrowseImage1> name=NC_008398:22284805..22287442 source=RiceChromosome05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008398:22284805..22287442 source=RiceChromosome05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggagtggtccgacggtggcgaggagttcttgctgccggatgagttcctcgacgacgacttcttctccgaggaggagaaggccgccgtggccgcgaggagcgatagcagcgacgaggaggattgcttggccggcctctcccgccgcctcgccgggcttcttggtgacgacggcgagcgcgacgcgcctcccaaggcggaggtgacggttggttcgccgcagtcgacgctgtgtgggctgcccaagtccggccaggagagcccgaacggcggggcgtctcaggtgagctcgccgccgtcgtcgccgttggagcagaagccggcggacccgtgggacatgctctatgaggcggcaggtcaggtggcgcgcatgcgggtcaccaacagcatcccggtgccgaacaatccctacggcttccccgcccacggtggctttgccgctccggcgcgcaaggcctcgccgccgcctcccgtttctccaccggcaacaaaggtcgctcccgccgcctactaccatccgctcgcccagttgcttacacagcgccagattcaagccgcacagtttcatctcctcaagcagcagcagctgctgaagttgcagagggatcggcatctcgccgcggccgccgcgtggggcgcgaggcagacggcagcggcgaagaccgccgggtgcggagtcgccgcgtcgcctgtcgacatgaaccctgcggcgtggcctcccttgcagaagcagcagcacgcgccggcacccggagtcgggggtggcggcggcggcggcatgcgcgccgtgttcctcaccccgcccggcgccaagcgcgagcgcaacggcaccggcgtcttcctccctcgcccggccggcgcaccggcggagcccaagagaaagacaggctgctcgactgttcttgtccccgcccgtgtcgtgcaagcgctcaatctcaacctcgacgacctcggcgcccagcctcgctaccccggcggtttcgttctcgatcacgacgctttgattaaccggagcaacgccatgctggccagccagaagcggcgcgcgtctccagccgtgccgtcgccggcgccggcgcctgcgctctgccacagttcgtga</cdnaseq>

Protein Sequence

<aaseq>MATEWSDGGEEFLLPDEFLDDDFFSEEEKAAVAARSDSSDEEDC LAGLSRRLAGLLGDDGERDAPPKAEVTVGSPQSTLCGLPKSGQESPNGGASQVSSPPS SPLEQKPADPWDMLYEAAGQVARMRVTNSIPVPNNPYGFPAHGGFAAPARKASPPPPV SPPATKVAPAAYYHPLAQLLTQRQIQAAQFHLLKQQQLLKLQRDRHLAAAAAWGARQT AAAKTAGCGVAASPVDMNPAAWPPLQKQQHAPAPGVGGGGGGGMRAVFLTPPGAKRER NGTGVFLPRPAGAPAEPKRKTGCSTVLVPARVVQALNLNLDDLGAQPRYPGGFVLDHD ALINRSNAMLASQKRRASPAVPSPAPAPALCHSS</aaseq>

Gene Sequence

<dnaseqindica>1668..1774#1476..1583#1050..1374#602..967#328..528#agcattttgactcgcggtgccgccgtccagcgacattctcacgccccccatctccttctccgcccgcttcttttcggcgacaagaacctctctactcgccgccgcttgcgtcgcgctcggcttcgcgcccttcgttctccgcctcctttgtgtgtgggggggaccggccggatagctggttgtggccgctgtccgtacggttcgaagctgtcactagttcttctcgtcgtcctcgggcgggcagaggttctcgcccaccaaaccggcacgccataactctcgggggggaaggaggtcaggattgttgtggtggggaattggagggaaatggcgacggagtggtccgacggtggcgaggagttcttgctgccggatgagttcctcgacgacgacttcttctccgaggaggagaaggccgccgtggccgcgaggagcgatagcagcgacgaggaggattgcttggccggcctctcccgccgcctcgccgggcttcttggtgacgacggcgagcgcgacgcgcctcccaaggtggtttgatttttcttggttctttcaaagggggatgatgtgtcgtggtttttgattggtttttcgtgtgcaggcggaggtgacggttggttcgccgcagtcgacgctgtgtgggctgcccaagtccggccaggagagcccgaacggcggggcgtctcaggtgagctcgccgccgtcgtcgccgttggagcagaagccggcggacccgtgggacatgctctatgaggcggcaggtcaggtggcgcgcatgcgggtcaccaacagcatcccggtgccgaacaatccctacggcttccccgcccacggtggctttgccgctccggcgcgcaaggcctcgccgccgcctcccgtttctccaccggcaacaaaggtcgctcccgccgcctactaccatccgctcgcccagttgcttacacagcgccagattcaagccgcacaggtacttggttcatgcagagattcttcagttgcaccgtcgttttccgcggttttttctccccgacatttttctcctgtttcagtttcatctcctcaagcagcagcagctgctgaagttgcagagggatcggcatctcgccgcggccgccgcgtggggcgcgaggcagacggcagcggcgaagaccgccgggtgcggagtcgccgcgtcgcctgtcgacatgaaccctgcggcgtggcctcccttgcagaagcagcagcacgcgccggcacccggagtcgggggtggcggcggcggcggcatgcgcgccgtgttcctcaccccgcccggcgccaagcgcgagcgcaacggcaccggcgtcttcctccctcgcccggccggcgcaccggcggagcccaagagaaagacaggtgcagtgtccgccatttttggccgtttgcttttgccggcgtattcccctgttcttttggctcaatattcttcccctttggtgttttccgcgaccctgcaggctgctcgactgttcttgtccccgcccgtgtcgtgcaagcgctcaatctcaacctcgacgacctcggcgcccagcctcgctaccccggcggtttcgttctcgatcacggtaaccaccacatgcggcgaaatcctcttttctcgacggaaatggcaagcaaaagcttatgtcgagttgtttttttttatgcagacgctttgattaaccggagcaacgccatgctggccagccagaagcggcgcgcgtctccagccgtgccgtcgccggcgccggcgcctgcgctctgccacagttcgtgaacttttttgtgtcggccggagcagacgaaggatgatgcaccaagattccggcggcccccttctggctttgcgtcaagtttaatcatattaattaaagttagtaacagtacttcgtctgttaggtggtagtattagccaaagagggtagtaggaggcagtagtatcatcagcgttaggtttgtttgtttgattggtgatatattggttttttggtgtggacggaaagcggcggagatggagacggagacgacgtgcagtagaggaaatccatgtcttcggtttggtggtttggcagagtggtttggaaggaataataataagtggttcttttggagggcgagagagaaatgttagcggcttgtgcagcttgcaagcaagaagtgacaaggtatcatcaaagtggtttatggatgggtcatcttgggggagccaaaaataaacccatttctacatcatccatggctttgcttgctttgggtgcttgccaagaagtgaagtaccagcgcacacccagctataaggtctctctccctcctccctcctttttgcagtcttttacttgcaaaagaagcttgccgtgggctccgtgaataagggcgttcctttcttaaggaaaaaaaagaaaaggaaactatgaatttaattgccatttttcttgtactagcttataggtgccctaaccttctgttttggttcggtacaataagattcttatttaggggtgtagtagttcggtgcttagccgcagcagcagcaaagttgggctgggtgttgttaaacaacagttgtatttgtaccatcaaagccttaatatatgaatgatggtgagtatttcttactagttgacaataaatacatgattat</dnaseqindica>

External Link(s)

NCBI Gene:Os05g0453300, RefSeq:Os05g0453300